RNA–Protein interactions for RNA: ENST00000433066.1

SMPD4P1-202, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 3

Gene SMPD4P1, Length 483 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-202ENST00000433066 KDM3BQ7LBC6 1761 aa9.63□□□□□ -0.87
SMPD4P1-202ENST00000433066 UBE2Q2LH0YL09 131 aa9.63□□□□□ -0.87
SMPD4P1-202ENST00000433066 ECE2O60344 883 aa9.63□□□□□ -0.87
SMPD4P1-202ENST00000433066 FKTNO75072 461 aa9.63□□□□□ -0.87
SMPD4P1-202ENST00000433066 PDIA6Q15084 440 aa9.63□□□□□ -0.87
SMPD4P1-202ENST00000433066 WASHC4Q2M389 1173 aa9.63□□□□□ -0.87
SMPD4P1-202ENST00000433066 ANGEL2Q5VTE6 544 aaKnown RBP9.63□□□□□ -0.87
SMPD4P1-202ENST00000433066 RTF1Q92541 710 aaKnown RBP9.63□□□□□ -0.87
SMPD4P1-202ENST00000433066 ERBB4Q15303 1308 aa9.62□□□□□ -0.87
SMPD4P1-202ENST00000433066 GPSM2P81274 684 aa9.62□□□□□ -0.87
SMPD4P1-202ENST00000433066 SCARF1Q14162 830 aa9.62□□□□□ -0.87
SMPD4P1-202ENST00000433066 DOK7Q18PE1 504 aa9.62□□□□□ -0.87
SMPD4P1-202ENST00000433066 INTS3Q68E01 1043 aaKnown RBP9.62□□□□□ -0.87
SMPD4P1-202ENST00000433066 DDX46Q7L014 1031 aaKnown RBP9.62□□□□□ -0.87
SMPD4P1-202ENST00000433066 TMC4Q7Z404 712 aa9.62□□□□□ -0.87
SMPD4P1-202ENST00000433066 NLRP10Q86W26 655 aa9.62□□□□□ -0.87
SMPD4P1-202ENST00000433066 GMLQ99445 158 aa9.62□□□□□ -0.87
SMPD4P1-202ENST00000433066 SCN9AQ15858 1988 aa9.62□□□□□ -0.87
SMPD4P1-202ENST00000433066 RBBP6Q7Z6E9 1792 aaKnown RBP9.62□□□□□ -0.87
SMPD4P1-202ENST00000433066 KIAA0100Q14667 2235 aaKnown RBP9.62□□□□□ -0.87
SMPD4P1-202ENST00000433066 PITPNM2Q9BZ72 1349 aa9.61□□□□□ -0.87
SMPD4P1-202ENST00000433066 RIMBP2O15034 1052 aa9.61□□□□□ -0.87
SMPD4P1-202ENST00000433066 EN2P19622 333 aaPredicted RBP9.61□□□□□ -0.87
SMPD4P1-202ENST00000433066 PROSER3Q2NL68 480 aa9.61□□□□□ -0.87
SMPD4P1-202ENST00000433066 OTOP1Q7RTM1 612 aa9.61□□□□□ -0.87
SMPD4P1-202ENST00000433066 CELF1Q92879 486 aaKnown RBP9.61□□□□□ -0.87
SMPD4P1-202ENST00000433066 ARMC5Q96C12 935 aa9.61□□□□□ -0.87
SMPD4P1-202ENST00000433066 OTUD5Q96G74 571 aa9.61□□□□□ -0.87
SMPD4P1-202ENST00000433066 TAF1P21675 1872 aa9.6□□□□□ -0.87
SMPD4P1-202ENST00000433066 CAP1Q01518 475 aa9.6□□□□□ -0.87
SMPD4P1-202ENST00000433066 PRAMEF18Q5VWM3 479 aa9.6□□□□□ -0.87
SMPD4P1-202ENST00000433066 TBC1D16Q8TBP0 767 aa9.6□□□□□ -0.87
SMPD4P1-202ENST00000433066 PNISRQ8TF01 805 aaKnown RBP9.6□□□□□ -0.87
SMPD4P1-202ENST00000433066 THUMPD2Q9BTF0 503 aaKnown RBP9.6□□□□□ -0.87
SMPD4P1-202ENST00000433066 RNF39Q9H2S5 420 aa9.6□□□□□ -0.87
SMPD4P1-202ENST00000433066 NSFL1CQ9UNZ2 370 aaKnown RBP9.6□□□□□ -0.87
SMPD4P1-202ENST00000433066 SCAF8Q9UPN6 1271 aaKnown RBP9.6□□□□□ -0.87
SMPD4P1-202ENST00000433066 DDX60Q8IY21 1712 aaKnown RBP9.59□□□□□ -0.87
SMPD4P1-202ENST00000433066 SH3TC1Q8TE82 1336 aa9.59□□□□□ -0.87
SMPD4P1-202ENST00000433066 DLL1O00548 723 aa9.59□□□□□ -0.87
SMPD4P1-202ENST00000433066 SREBF2Q12772 1141 aa9.59□□□□□ -0.87
SMPD4P1-202ENST00000433066 MKRN3Q13064 507 aaKnown RBP9.59□□□□□ -0.87
SMPD4P1-202ENST00000433066 RSBN1LQ6PCB5 846 aaPredicted RBP9.59□□□□□ -0.87
SMPD4P1-202ENST00000433066 AGBL3Q8NEM8 1001 aa9.59□□□□□ -0.87
SMPD4P1-202ENST00000433066 NECTIN2Q92692 538 aa9.59□□□□□ -0.87
SMPD4P1-202ENST00000433066 TRIM17Q9Y577 477 aa9.59□□□□□ -0.87
SMPD4P1-202ENST00000433066 C6orf229H3BNL8 230 aa9.58□□□□□ -0.88
SMPD4P1-202ENST00000433066 U2AF1L5P0DN76 240 aaPredicted RBP9.58□□□□□ -0.88
SMPD4P1-202ENST00000433066 U2AF1Q01081 240 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMPD4P1-202ENST00000433066 PTPN12Q05209 780 aaKnown RBP9.58□□□□□ -0.88
SMPD4P1-202ENST00000433066 SF3B3Q15393 1217 aaKnown RBP9.58□□□□□ -0.88
SMPD4P1-202ENST00000433066 LDLRAD1Q5T700 205 aa9.58□□□□□ -0.88
SMPD4P1-202ENST00000433066 SPRYD7Q5W111 196 aa9.58□□□□□ -0.88
SMPD4P1-202ENST00000433066 MYOZ2Q9NPC6 264 aa9.58□□□□□ -0.88
SMPD4P1-202ENST00000433066 PODXL2Q9NZ53 605 aa9.58□□□□□ -0.88
SMPD4P1-202ENST00000433066 PTPN22Q9Y2R2 807 aa9.58□□□□□ -0.88
SMPD4P1-202ENST00000433066 LAMA3Q16787 3333 aa9.58□□□□□ -0.88
SMPD4P1-202ENST00000433066 H0YGN5 161 aa9.57□□□□□ -0.88
SMPD4P1-202ENST00000433066 NPM3O75607 178 aaKnown RBP9.57□□□□□ -0.88
SMPD4P1-202ENST00000433066 ANXA1P04083 346 aa9.57□□□□□ -0.88
SMPD4P1-202ENST00000433066 TCIRG1Q13488 830 aa9.57□□□□□ -0.88
SMPD4P1-202ENST00000433066 EYA3Q99504 573 aa9.57□□□□□ -0.88
SMPD4P1-202ENST00000433066 TRMT112Q9UI30 125 aaKnown RBP9.57□□□□□ -0.88
SMPD4P1-202ENST00000433066 IGF2BP3O00425 579 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMPD4P1-202ENST00000433066 ALDH1A1P00352 501 aa9.56□□□□□ -0.88
SMPD4P1-202ENST00000433066 USP17L8P0C7I0 530 aa9.56□□□□□ -0.88
SMPD4P1-202ENST00000433066 NBPF9Q3BBW0 867 aa9.56□□□□□ -0.88
SMPD4P1-202ENST00000433066 HSP90AB3PQ58FF7 597 aa9.56□□□□□ -0.88
SMPD4P1-202ENST00000433066 IFNL1Q8IU54 200 aa9.56□□□□□ -0.88
SMPD4P1-202ENST00000433066 ZNF333Q96JL9 665 aa9.56□□□□□ -0.88
SMPD4P1-202ENST00000433066 COPS6Q7L5N1 327 aa9.55□□□□□ -0.88
SMPD4P1-202ENST00000433066 CD99L2Q8TCZ2 262 aa9.55□□□□□ -0.88
SMPD4P1-202ENST00000433066 XAGE3Q8WTP9 111 aa9.55□□□□□ -0.88
SMPD4P1-202ENST00000433066 CFAP53Q96M91 514 aa9.55□□□□□ -0.88
SMPD4P1-202ENST00000433066 ZC3H12CQ9C0D7 883 aaKnown RBP9.55□□□□□ -0.88
SMPD4P1-202ENST00000433066 PRO3102Q9H379 93 aa9.55□□□□□ -0.88
SMPD4P1-202ENST00000433066 NUDCQ9Y266 331 aa9.55□□□□□ -0.88
SMPD4P1-202ENST00000433066 PSME4Q14997 1843 aa9.54□□□□□ -0.88
SMPD4P1-202ENST00000433066 UFL1O94874 794 aa9.54□□□□□ -0.88
SMPD4P1-202ENST00000433066 RPS8P62241 208 aaKnown RBP9.54□□□□□ -0.88
SMPD4P1-202ENST00000433066 SLC17A8Q8NDX2 589 aa9.54□□□□□ -0.88
SMPD4P1-202ENST00000433066 ZNF428Q96B54 188 aa9.54□□□□□ -0.88
SMPD4P1-202ENST00000433066 FAM89AQ96GI7 184 aa9.54□□□□□ -0.88
SMPD4P1-202ENST00000433066 ERO1AQ96HE7 468 aa9.54□□□□□ -0.88
SMPD4P1-202ENST00000433066 ISCA1Q9BUE6 129 aa9.54□□□□□ -0.88
SMPD4P1-202ENST00000433066 LAMB1P07942 1786 aa9.54□□□□□ -0.88
SMPD4P1-202ENST00000433066 SSC5DA1L4H1 1573 aa9.54□□□□□ -0.88
SMPD4P1-202ENST00000433066 MANSC4A6NHS7 340 aaPredicted RBP9.53□□□□□ -0.88
SMPD4P1-202ENST00000433066 WNT10BO00744 389 aa9.53□□□□□ -0.88
SMPD4P1-202ENST00000433066 CNGB1Q14028 1251 aaPredicted RBP9.53□□□□□ -0.88
SMPD4P1-202ENST00000433066 TTLL12Q14166 644 aaPredicted RBP9.53□□□□□ -0.88
SMPD4P1-202ENST00000433066 CHRDL2Q6WN34 429 aa9.53□□□□□ -0.88
SMPD4P1-202ENST00000433066 PLEKHF1Q96S99 279 aa9.53□□□□□ -0.88
SMPD4P1-202ENST00000433066 RBM27Q9P2N5 1060 aaKnown RBP9.53□□□□□ -0.88
SMPD4P1-202ENST00000433066 ZNF646O15015 1829 aaPredicted RBP9.53□□□□□ -0.88
SMPD4P1-202ENST00000433066 USP17L3A6NCW0 530 aa9.52□□□□□ -0.89
SMPD4P1-202ENST00000433066 USP17L4A6NCW7 530 aa9.52□□□□□ -0.89
SMPD4P1-202ENST00000433066 EIF2S2P20042 333 aaKnown RBP9.52□□□□□ -0.89
SMPD4P1-202ENST00000433066 PPP2R1AP30153 589 aa9.52□□□□□ -0.89
SMPD4P1-202ENST00000433066 GJA5P36382 358 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms