RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 EAPPQ56P03 285 aaPredicted RBP7.88□□□□□ -1.15
NIPAL3-205ENST00000432012 EIF3AQ14152 1382 aaKnown RBP7.88□□□□□ -1.15
NIPAL3-205ENST00000432012 SCAMP3O14828 347 aaKnown RBP7.87□□□□□ -1.15
NIPAL3-205ENST00000432012 TMEM87AQ8NBN3 555 aa7.87□□□□□ -1.15
NIPAL3-205ENST00000432012 ABCC11Q96J66 1382 aa7.87□□□□□ -1.15
NIPAL3-205ENST00000432012 SDE2Q6IQ49 451 aa7.87□□□□□ -1.15
NIPAL3-205ENST00000432012 TLDC2A0PJX2 215 aa7.87□□□□□ -1.15
NIPAL3-205ENST00000432012 LARP1Q6PKG0 1096 aaKnown RBP7.87□□□□□ -1.15
NIPAL3-205ENST00000432012 ZSWIM4Q9H7M6 989 aa7.87□□□□□ -1.15
NIPAL3-205ENST00000432012 MRPL42Q9Y6G3 142 aaKnown RBP7.87□□□□□ -1.15
NIPAL3-205ENST00000432012 KAT6BQ8WYB5 2073 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 PTMSP20962 102 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 ARSIQ5FYB1 569 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 MORC4Q8TE76 937 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 STRN4Q9NRL3 753 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 DCTN4Q9UJW0 460 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 RPS6KL1Q9Y6S9 549 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 PAPPAQ13219 1627 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 TNS2Q63HR2 1409 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 USP47Q96K76 1375 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 YBX3P16989 372 aaKnown RBP eCLIP7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 GCGRP47871 477 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 FANCCQ00597 558 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 NR1H3Q13133 447 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 KCNG1Q9UIX4 513 aa7.86□□□□□ -1.15
NIPAL3-205ENST00000432012 PCDHGB7Q9Y5F8 929 aa7.85□□□□□ -1.15
NIPAL3-205ENST00000432012 RGPD8O14715 1765 aaPredicted RBP7.85□□□□□ -1.15
NIPAL3-205ENST00000432012 IGBP1P78318 339 aa7.85□□□□□ -1.15
NIPAL3-205ENST00000432012 SETQ01105 290 aaPredicted RBP7.85□□□□□ -1.15
NIPAL3-205ENST00000432012 FUT2Q10981 343 aa7.85□□□□□ -1.15
NIPAL3-205ENST00000432012 PLEKHM2Q8IWE5 1019 aa7.85□□□□□ -1.15
NIPAL3-205ENST00000432012 STAG1Q8WVM7 1258 aa7.85□□□□□ -1.15
NIPAL3-205ENST00000432012 AKAP12Q02952 1782 aa7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 KIAA0232Q92628 1395 aa7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 CEP350Q5VT06 3117 aa7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 HSPA1AP0DMV8 641 aaKnown RBP7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 HSPA1BP0DMV9 641 aaKnown RBP7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 DNAJB2P25686 324 aa7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 HMGB2P26583 209 aaKnown RBP7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 C16orf71Q8IYS4 520 aaPredicted RBP7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 ZDHHC16Q969W1 377 aa7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 PHRF1Q9P1Y6 1649 aaKnown RBP7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 LRRC37A3O60309 1634 aa7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 C21orf2O43822 256 aa7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 DKK1O94907 266 aa7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 KIF4AO95239 1232 aa7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 TMC7Q7Z402 723 aa7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 SP7Q8TDD2 431 aaPredicted RBP7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 PNISRQ8TF01 805 aaKnown RBP7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 KCNB2Q92953 911 aa7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 CD2APQ9Y5K6 639 aa7.84□□□□□ -1.15
NIPAL3-205ENST00000432012 ROCK2O75116 1388 aaKnown RBP7.84□□□□□ -1.16
NIPAL3-205ENST00000432012 KIAA1210Q9ULL0 1709 aa7.83□□□□□ -1.16
NIPAL3-205ENST00000432012 CNGB1Q14028 1251 aaPredicted RBP7.83□□□□□ -1.16
NIPAL3-205ENST00000432012 NAA30Q147X3 362 aaPredicted RBP7.83□□□□□ -1.16
NIPAL3-205ENST00000432012 DDB1Q16531 1140 aa7.83□□□□□ -1.16
NIPAL3-205ENST00000432012 PPP1R18Q6NYC8 613 aa7.83□□□□□ -1.16
NIPAL3-205ENST00000432012 RPUSD2Q8IZ73 545 aaKnown RBP7.83□□□□□ -1.16
NIPAL3-205ENST00000432012 PPLO60437 1756 aa7.83□□□□□ -1.16
NIPAL3-205ENST00000432012 C10orf71Q711Q0 1435 aa7.83□□□□□ -1.16
NIPAL3-205ENST00000432012 ATP2B1P20020 1258 aa7.83□□□□□ -1.16
NIPAL3-205ENST00000432012 BMS1Q14692 1282 aaKnown RBP7.83□□□□□ -1.16
NIPAL3-205ENST00000432012 NOP9Q86U38 636 aaKnown RBP7.83□□□□□ -1.16
NIPAL3-205ENST00000432012 CXXC1Q9P0U4 656 aaPredicted RBP7.83□□□□□ -1.16
NIPAL3-205ENST00000432012 PNMA3Q9UL41 463 aa7.83□□□□□ -1.16
NIPAL3-205ENST00000432012 MLLT1Q03111 559 aaPredicted RBP7.82□□□□□ -1.16
NIPAL3-205ENST00000432012 TAS1R3Q7RTX0 852 aa7.82□□□□□ -1.16
NIPAL3-205ENST00000432012 NLGN2Q8NFZ4 835 aa7.82□□□□□ -1.16
NIPAL3-205ENST00000432012 TMC1Q8TDI8 760 aa7.82□□□□□ -1.16
NIPAL3-205ENST00000432012 NUP155O75694 1391 aa7.82□□□□□ -1.16
NIPAL3-205ENST00000432012 CRB1P82279 1406 aa7.82□□□□□ -1.16
NIPAL3-205ENST00000432012 SFI1A8K8P3 1242 aa7.82□□□□□ -1.16
NIPAL3-205ENST00000432012 ZBBXA8MT70 800 aa7.82□□□□□ -1.16
NIPAL3-205ENST00000432012 SWI5Q1ZZU3 235 aa7.82□□□□□ -1.16
NIPAL3-205ENST00000432012 ZFYVE27Q5T4F4 411 aa7.82□□□□□ -1.16
NIPAL3-205ENST00000432012 PLPP7Q8NBV4 271 aa7.82□□□□□ -1.16
NIPAL3-205ENST00000432012 CPDO75976 1380 aa7.82□□□□□ -1.16
NIPAL3-205ENST00000432012 CICQ96RK0 1608 aaPredicted RBP7.82□□□□□ -1.16
NIPAL3-205ENST00000432012 LMO7Q8WWI1 1683 aa7.81□□□□□ -1.16
NIPAL3-205ENST00000432012 SH3BP5O60239 455 aa7.81□□□□□ -1.16
NIPAL3-205ENST00000432012 HOXB3P14651 431 aaPredicted RBP7.81□□□□□ -1.16
NIPAL3-205ENST00000432012 ZNF394Q53GI3 561 aa7.81□□□□□ -1.16
NIPAL3-205ENST00000432012 CCDC146Q8IYE0 955 aa7.81□□□□□ -1.16
NIPAL3-205ENST00000432012 PARP2Q9UGN5 583 aa7.81□□□□□ -1.16
NIPAL3-205ENST00000432012 FMNL1O95466 1100 aaPredicted RBP7.81□□□□□ -1.16
NIPAL3-205ENST00000432012 RGL4Q8IZJ4 473 aa7.81□□□□□ -1.16
NIPAL3-205ENST00000432012 NFATC2IPQ8NCF5 419 aa7.81□□□□□ -1.16
NIPAL3-205ENST00000432012 USP19O94966 1318 aa7.81□□□□□ -1.16
NIPAL3-205ENST00000432012 NHSQ6T4R5 1651 aa7.81□□□□□ -1.16
NIPAL3-205ENST00000432012 RGS19P49795 217 aa7.8□□□□□ -1.16
NIPAL3-205ENST00000432012 WAPLQ7Z5K2 1190 aa7.8□□□□□ -1.16
NIPAL3-205ENST00000432012 WNK3Q9BYP7 1800 aa7.8□□□□□ -1.16
NIPAL3-205ENST00000432012 KTN1Q86UP2 1357 aaKnown RBP7.8□□□□□ -1.16
NIPAL3-205ENST00000432012 MAPK8P45983 427 aa7.8□□□□□ -1.16
NIPAL3-205ENST00000432012 RRP1P56182 461 aaKnown RBP7.8□□□□□ -1.16
NIPAL3-205ENST00000432012 RAVER1Q8IY67 606 aaKnown RBP7.8□□□□□ -1.16
NIPAL3-205ENST00000432012 DUSP9Q99956 384 aaKnown RBP7.8□□□□□ -1.16
NIPAL3-205ENST00000432012 MAP10Q9P2G4 905 aa7.8□□□□□ -1.16
NIPAL3-205ENST00000432012 ATP5J2-PTCD1G3V325 749 aa7.8□□□□□ -1.16
NIPAL3-205ENST00000432012 TCERG1O14776 1098 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms