RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 CCDC30Q5VVM6 783 aa18.38■□□□□ 0.53
SMARCE1-205ENST00000431889 USP48Q86UV5 1035 aa18.38■□□□□ 0.53
SMARCE1-205ENST00000431889 METTL22Q9BUU2 404 aaPredicted RBP18.38■□□□□ 0.53
SMARCE1-205ENST00000431889 ANKIB1Q9P2G1 1089 aa18.38■□□□□ 0.53
SMARCE1-205ENST00000431889 RTL9Q8NET4 1388 aa18.38■□□□□ 0.53
SMARCE1-205ENST00000431889 PI4KAP2A4QPH2 592 aa18.38■□□□□ 0.53
SMARCE1-205ENST00000431889 H7C1D1 291 aa18.38■□□□□ 0.53
SMARCE1-205ENST00000431889 UFL1O94874 794 aa18.38■□□□□ 0.53
SMARCE1-205ENST00000431889 CWF19L2Q2TBE0 894 aaKnown RBP18.38■□□□□ 0.53
SMARCE1-205ENST00000431889 TMC4Q7Z404 712 aa18.38■□□□□ 0.53
SMARCE1-205ENST00000431889 PI4KAP1Q8N8J0 262 aa18.38■□□□□ 0.53
SMARCE1-205ENST00000431889 TLL2Q9Y6L7 1015 aa18.38■□□□□ 0.53
SMARCE1-205ENST00000431889 ASTN2O75129 1339 aaPredicted RBP18.37■□□□□ 0.53
SMARCE1-205ENST00000431889 HSPA8P11142 646 aaKnown RBP18.37■□□□□ 0.53
SMARCE1-205ENST00000431889 CCDC191Q8NCU4 936 aa18.37■□□□□ 0.53
SMARCE1-205ENST00000431889 PDE8AO60658 829 aa18.36■□□□□ 0.53
SMARCE1-205ENST00000431889 PCCAP05165 728 aaPredicted RBP18.36■□□□□ 0.53
SMARCE1-205ENST00000431889 IGKV5-2P06315 115 aa18.36■□□□□ 0.53
SMARCE1-205ENST00000431889 ADM5C9JUS6 153 aa18.35■□□□□ 0.53
SMARCE1-205ENST00000431889 G3V3G9 751 aa18.35■□□□□ 0.53
SMARCE1-205ENST00000431889 CCDC152Q4G0S7 254 aa18.35■□□□□ 0.53
SMARCE1-205ENST00000431889 DCAF8Q5TAQ9 597 aa18.35■□□□□ 0.53
SMARCE1-205ENST00000431889 WWC1Q8IX03 1113 aa18.35■□□□□ 0.53
SMARCE1-205ENST00000431889 ZC3H12CQ9C0D7 883 aaKnown RBP18.35■□□□□ 0.53
SMARCE1-205ENST00000431889 SCAF8Q9UPN6 1271 aaKnown RBP18.35■□□□□ 0.53
SMARCE1-205ENST00000431889 DDX58O95786 925 aaKnown RBP18.34■□□□□ 0.53
SMARCE1-205ENST00000431889 SAPCD2Q86UD0 394 aa18.34■□□□□ 0.53
SMARCE1-205ENST00000431889 EYA3Q99504 573 aa18.34■□□□□ 0.53
SMARCE1-205ENST00000431889 TWISTNBQ3B726 338 aaPredicted RBP18.34■□□□□ 0.53
SMARCE1-205ENST00000431889 KSR2Q6VAB6 950 aa18.34■□□□□ 0.53
SMARCE1-205ENST00000431889 MRS2Q9HD23 443 aa18.34■□□□□ 0.53
SMARCE1-205ENST00000431889 PGAP2Q9UHJ9 254 aa18.34■□□□□ 0.53
SMARCE1-205ENST00000431889 GGA1Q9UJY5 639 aa18.34■□□□□ 0.53
SMARCE1-205ENST00000431889 SLC4A2P04920 1241 aa18.33■□□□□ 0.52
SMARCE1-205ENST00000431889 MAP2K1Q02750 393 aaPredicted RBP18.33■□□□□ 0.52
SMARCE1-205ENST00000431889 CDC37L1Q7L3B6 337 aa18.33■□□□□ 0.52
SMARCE1-205ENST00000431889 ANKRD18AQ8IVF6 992 aa18.33■□□□□ 0.52
SMARCE1-205ENST00000431889 ZIC5Q96T25 663 aa18.33■□□□□ 0.52
SMARCE1-205ENST00000431889 GREM2Q9H772 168 aa18.33■□□□□ 0.52
SMARCE1-205ENST00000431889 PRDM10Q9NQV6 1147 aa18.33■□□□□ 0.52
SMARCE1-205ENST00000431889 CDHR2Q9BYE9 1310 aa18.32■□□□□ 0.52
SMARCE1-205ENST00000431889 MYH3P11055 1940 aa18.32■□□□□ 0.52
SMARCE1-205ENST00000431889 ECE1P42892 770 aa18.32■□□□□ 0.52
SMARCE1-205ENST00000431889 CTSWP56202 376 aa18.32■□□□□ 0.52
SMARCE1-205ENST00000431889 MXD3Q9BW11 206 aa18.32■□□□□ 0.52
SMARCE1-205ENST00000431889 STK31Q9BXU1 1019 aa18.32■□□□□ 0.52
SMARCE1-205ENST00000431889 THSD7BQ9C0I4 1608 aa18.32■□□□□ 0.52
SMARCE1-205ENST00000431889 UBE3BQ7Z3V4 1068 aa18.31■□□□□ 0.52
SMARCE1-205ENST00000431889 KRT26Q7Z3Y9 468 aa18.31■□□□□ 0.52
SMARCE1-205ENST00000431889 NEURL1BA8MQ27 555 aa18.3■□□□□ 0.52
SMARCE1-205ENST00000431889 KIF4BQ2VIQ3 1234 aa18.3■□□□□ 0.52
SMARCE1-205ENST00000431889 ZC3H15Q8WU90 426 aaKnown RBP18.3■□□□□ 0.52
SMARCE1-205ENST00000431889 DPF2Q92785 391 aa18.3■□□□□ 0.52
SMARCE1-205ENST00000431889 FBXW7Q969H0 707 aa18.3■□□□□ 0.52
SMARCE1-205ENST00000431889 PODXL2Q9NZ53 605 aa18.3■□□□□ 0.52
SMARCE1-205ENST00000431889 TTLL11Q8NHH1 800 aa18.3■□□□□ 0.52
SMARCE1-205ENST00000431889 BEGAINQ9BUH8 593 aa18.3■□□□□ 0.52
SMARCE1-205ENST00000431889 FANCIQ9NVI1 1328 aa18.29■□□□□ 0.52
SMARCE1-205ENST00000431889 VIL1P09327 827 aaKnown RBP18.29■□□□□ 0.52
SMARCE1-205ENST00000431889 HUNKP57058 714 aa18.29■□□□□ 0.52
SMARCE1-205ENST00000431889 NEXNQ0ZGT2 675 aa18.29■□□□□ 0.52
SMARCE1-205ENST00000431889 GGA3Q9NZ52 723 aa18.29■□□□□ 0.52
SMARCE1-205ENST00000431889 DCPSQ96C86 337 aaKnown RBP18.28■□□□□ 0.52
SMARCE1-205ENST00000431889 XDHP47989 1333 aa18.27■□□□□ 0.52
SMARCE1-205ENST00000431889 FKBP5Q13451 457 aaPredicted RBP18.27■□□□□ 0.52
SMARCE1-205ENST00000431889 SPINK5Q9NQ38 1064 aaPredicted RBP18.27■□□□□ 0.52
SMARCE1-205ENST00000431889 MINPP1Q9UNW1 487 aa18.27■□□□□ 0.52
SMARCE1-205ENST00000431889 CASP8AP2Q9UKL3 1982 aa18.27■□□□□ 0.51
SMARCE1-205ENST00000431889 HSP90B1P14625 803 aaKnown RBP18.26■□□□□ 0.51
SMARCE1-205ENST00000431889 RPS12P25398 132 aaKnown RBP18.26■□□□□ 0.51
SMARCE1-205ENST00000431889 KLRK1P26718 216 aa18.26■□□□□ 0.51
SMARCE1-205ENST00000431889 EXOSC9Q06265 439 aaKnown RBP18.26■□□□□ 0.51
SMARCE1-205ENST00000431889 FLIIQ13045 1269 aa18.26■□□□□ 0.51
SMARCE1-205ENST00000431889 CCDC27Q2M243 656 aa18.26■□□□□ 0.51
SMARCE1-205ENST00000431889 RSBN1LQ6PCB5 846 aaPredicted RBP18.26■□□□□ 0.51
SMARCE1-205ENST00000431889 TXNRD3Q86VQ6 643 aa18.26■□□□□ 0.51
SMARCE1-205ENST00000431889 CDC5LQ99459 802 aaKnown RBP18.26■□□□□ 0.51
SMARCE1-205ENST00000431889 PSME4Q14997 1843 aa18.26■□□□□ 0.51
SMARCE1-205ENST00000431889 F6X3S4 739 aa18.25■□□□□ 0.51
SMARCE1-205ENST00000431889 ATP2B4P23634 1241 aa18.25■□□□□ 0.51
SMARCE1-205ENST00000431889 SCARF1Q14162 830 aa18.25■□□□□ 0.51
SMARCE1-205ENST00000431889 FAM161AQ3B820 660 aa18.25■□□□□ 0.51
SMARCE1-205ENST00000431889 ANGEL2Q5VTE6 544 aaKnown RBP18.25■□□□□ 0.51
SMARCE1-205ENST00000431889 PRAMEF18Q5VWM3 479 aa18.25■□□□□ 0.51
SMARCE1-205ENST00000431889 H7C1W4 665 aa18.25■□□□□ 0.51
SMARCE1-205ENST00000431889 SNAP23O00161 211 aa18.25■□□□□ 0.51
SMARCE1-205ENST00000431889 ANP32CO43423 234 aa18.25■□□□□ 0.51
SMARCE1-205ENST00000431889 GCKRQ14397 625 aa18.25■□□□□ 0.51
SMARCE1-205ENST00000431889 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
SMARCE1-205ENST00000431889 GBA2Q9HCG7 927 aaPredicted RBP18.25■□□□□ 0.51
SMARCE1-205ENST00000431889 MAP2K2P36507 400 aa18.24■□□□□ 0.51
SMARCE1-205ENST00000431889 ABHD8Q96I13 439 aa18.24■□□□□ 0.51
SMARCE1-205ENST00000431889 USP17L3A6NCW0 530 aa18.23■□□□□ 0.51
SMARCE1-205ENST00000431889 USP17L4A6NCW7 530 aa18.23■□□□□ 0.51
SMARCE1-205ENST00000431889 VAMP4O75379 141 aa18.23■□□□□ 0.51
SMARCE1-205ENST00000431889 ITGA6P23229 1130 aa18.23■□□□□ 0.51
SMARCE1-205ENST00000431889 CCT4P50991 539 aaKnown RBP18.23■□□□□ 0.51
SMARCE1-205ENST00000431889 MOB2Q70IA6 237 aa18.23■□□□□ 0.51
SMARCE1-205ENST00000431889 USP17L1Q7RTZ2 530 aa18.23■□□□□ 0.51
SMARCE1-205ENST00000431889 SULF1Q8IWU6 871 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms