RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 OTUD6BQ8N6M0 293 aa13.35□□□□□ -0.27
RIMKLA-202ENST00000431473 TSNARE1Q96NA8 513 aa13.35□□□□□ -0.27
RIMKLA-202ENST00000431473 F13A1P00488 732 aa13.35□□□□□ -0.27
RIMKLA-202ENST00000431473 GSTA5Q7RTV2 222 aa13.35□□□□□ -0.27
RIMKLA-202ENST00000431473 PI4KAP2A4QPH2 592 aa13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 UBXN1Q04323 297 aa13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 PI4KAP1Q8N8J0 262 aa13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 RAPGEF3O95398 923 aa13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 IFIT1BQ5T764 474 aaKnown RBP13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 KRBA2Q6ZNG9 492 aa13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 DDX23Q9BUQ8 820 aaKnown RBP13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 ZBTB3Q9H5J0 574 aa13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 CHST3Q7LGC8 479 aa13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 MRPS27Q92552 414 aaKnown RBP13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 IRX3P78415 501 aaPredicted RBP13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 C16orf71Q8IYS4 520 aaPredicted RBP13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 KCNH5Q8NCM2 988 aa13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 RPGRIP1LQ68CZ1 1315 aa13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 HDAC1Q13547 482 aaPredicted RBP13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 WTAPQ15007 396 aa13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 EHMT1Q9H9B1 1298 aa13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 SYT10Q6XYQ8 523 aa13.34□□□□□ -0.27
RIMKLA-202ENST00000431473 AMOTQ4VCS5 1084 aa13.33□□□□□ -0.27
RIMKLA-202ENST00000431473 ESYT1Q9BSJ8 1104 aa13.33□□□□□ -0.27
RIMKLA-202ENST00000431473 EBAG9O00559 213 aa13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 ACTN2P35609 894 aa13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 RPGRQ92834 1020 aaKnown RBP13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 CCDC129Q6ZRS4 1044 aa13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 HEATR3Q7Z4Q2 680 aa13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 CWC25Q9NXE8 425 aaPredicted RBP13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 ZNF569Q5MCW4 686 aa13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 WDR78Q5VTH9 848 aa13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 PIK3R4Q99570 1358 aa13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 TBCAO75347 108 aaKnown RBP13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 IFNKQ9P0W0 207 aa13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 RBM8AQ9Y5S9 174 aaKnown RBP13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 ZBTB43O43298 467 aa13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 STX8Q9UNK0 236 aa13.33□□□□□ -0.28
RIMKLA-202ENST00000431473 ZBTB16Q05516 673 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 FAM160A1Q05DH4 1040 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 STXBP4Q6ZWJ1 553 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 SPAG5Q96R06 1193 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 ZGPATQ8N5A5 531 aaKnown RBP13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 ZNF526Q8TF50 670 aaPredicted RBP13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 CTTNBP2Q8WZ74 1663 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 GJC1P36383 396 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 CCDC174Q6PII3 467 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 CCDC63Q8NA47 563 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 MEIS3Q99687 375 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 CPLX4Q7Z7G2 160 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 CCDC172P0C7W6 258 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 SREK1Q8WXA9 508 aaKnown RBP13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 DHX58Q96C10 678 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 KIF5AQ12840 1032 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 PLVAPQ9BX97 442 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 ARL1P40616 181 aaPredicted RBP13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 CCDC50Q8IVM0 306 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 TTC21AQ8NDW8 1320 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 ABCC5O15440 1437 aa13.32□□□□□ -0.28
RIMKLA-202ENST00000431473 TACC1O75410 805 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 DAAM2Q86T65 1068 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 CCDC25Q86WR0 208 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 RTN1Q16799 776 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 LDHAL6AQ6ZMR3 332 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 KRT86O43790 486 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 PDE1AP54750 535 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 NBPF11Q86T75 865 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 CCDC114Q96M63 670 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 UTP14AQ9BVJ6 771 aaKnown RBP13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 CHPF2Q9P2E5 772 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 MRVI1Q9Y6F6 885 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 TSPY3P0CV98 308 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 TSPY8P0CW00 308 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 FBLN1P23142 703 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 ANXA1P04083 346 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 GRIPAP1Q4V328 841 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 FERMT1Q9BQL6 677 aa13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 STMN4Q9H169 189 aaPredicted RBP13.31□□□□□ -0.28
RIMKLA-202ENST00000431473 SNAPC4Q5SXM2 1469 aa13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 UBLCP1Q8WVY7 318 aaPredicted RBP13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 STX17P56962 302 aa13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 ASIC1P78348 528 aa13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 SNX21Q969T3 373 aa13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 HDXQ7Z353 690 aa13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 OGFRQ9NZT2 677 aa13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 RALGAPBQ86X10 1494 aa13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 PSMC4P43686 418 aa13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 PLCD3Q8N3E9 789 aa13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 FAM76AQ8TAV0 307 aa13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 SCAF11Q99590 1463 aaKnown RBP13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 SLF2Q8IX21 1173 aa13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 RHPN1Q8TCX5 695 aa13.3□□□□□ -0.28
RIMKLA-202ENST00000431473 SF3B2Q13435 895 aaKnown RBP13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 FEZ1Q99689 392 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 MCMDC2Q4G0Z9 681 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 DDX12PQ92771 950 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 PPP1R9BQ96SB3 815 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms