RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 NCLP19338 710 aaKnown RBP13.59□□□□□ -0.23
SMPD4-205ENST00000431183 CASP7P55210 303 aa13.59□□□□□ -0.23
SMPD4-205ENST00000431183 ANKRD18AQ8IVF6 992 aa13.59□□□□□ -0.23
SMPD4-205ENST00000431183 USP26Q9BXU7 913 aa13.59□□□□□ -0.23
SMPD4-205ENST00000431183 ZNF589Q86UQ0 364 aaPredicted RBP13.59□□□□□ -0.23
SMPD4-205ENST00000431183 CASTP20810 708 aaKnown RBP13.58□□□□□ -0.23
SMPD4-205ENST00000431183 LRP2BPQ9P2M1 347 aa13.58□□□□□ -0.23
SMPD4-205ENST00000431183 COL16A1Q07092 1604 aaPredicted RBP13.58□□□□□ -0.23
SMPD4-205ENST00000431183 NHSL1Q5SYE7 1610 aa13.58□□□□□ -0.24
SMPD4-205ENST00000431183 HSP90B1P14625 803 aaKnown RBP13.58□□□□□ -0.24
SMPD4-205ENST00000431183 ZNF772Q68DY9 489 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-205ENST00000431183 PDGFDQ9GZP0 370 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-205ENST00000431183 PAG1Q9NWQ8 432 aa13.58□□□□□ -0.24
SMPD4-205ENST00000431183 SLIT2O94813 1529 aa13.58□□□□□ -0.24
SMPD4-205ENST00000431183 C6orf229H3BNL8 230 aa13.58□□□□□ -0.24
SMPD4-205ENST00000431183 NFIXQ14938 502 aa13.58□□□□□ -0.24
SMPD4-205ENST00000431183 RRP12Q5JTH9 1297 aaKnown RBP13.58□□□□□ -0.24
SMPD4-205ENST00000431183 RAI14Q9P0K7 980 aa13.58□□□□□ -0.24
SMPD4-205ENST00000431183 DISP2A7MBM2 1401 aa13.58□□□□□ -0.24
SMPD4-205ENST00000431183 F8W031 263 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-205ENST00000431183 G3V3G9 751 aa13.57□□□□□ -0.24
SMPD4-205ENST00000431183 DCAF8Q5TAQ9 597 aa13.57□□□□□ -0.24
SMPD4-205ENST00000431183 RPGRQ92834 1020 aaKnown RBP13.57□□□□□ -0.24
SMPD4-205ENST00000431183 RPS6KA4O75676 772 aa13.57□□□□□ -0.24
SMPD4-205ENST00000431183 RUFY2Q8WXA3 655 aa13.57□□□□□ -0.24
SMPD4-205ENST00000431183 EVI5LQ96CN4 794 aa13.57□□□□□ -0.24
SMPD4-205ENST00000431183 ZMYND15Q9H091 742 aa13.57□□□□□ -0.24
SMPD4-205ENST00000431183 EZH2Q15910 746 aaKnown RBP13.57□□□□□ -0.24
SMPD4-205ENST00000431183 VPS53Q5VIR6 699 aa13.57□□□□□ -0.24
SMPD4-205ENST00000431183 RASEFQ8IZ41 740 aa13.57□□□□□ -0.24
SMPD4-205ENST00000431183 MTX1Q13505 466 aa13.56□□□□□ -0.24
SMPD4-205ENST00000431183 SLC9C2Q5TAH2 1124 aa13.56□□□□□ -0.24
SMPD4-205ENST00000431183 ZNF34Q8IZ26 560 aa13.56□□□□□ -0.24
SMPD4-205ENST00000431183 ST18O60284 1047 aa13.56□□□□□ -0.24
SMPD4-205ENST00000431183 CHRNDQ07001 517 aa13.56□□□□□ -0.24
SMPD4-205ENST00000431183 TTLL5Q6EMB2 1281 aa13.56□□□□□ -0.24
SMPD4-205ENST00000431183 TAF6LQ9Y6J9 622 aa13.56□□□□□ -0.24
SMPD4-205ENST00000431183 A0A0G2JLW4 131 aa13.56□□□□□ -0.24
SMPD4-205ENST00000431183 KLRK1P26718 216 aa13.56□□□□□ -0.24
SMPD4-205ENST00000431183 ZGPATQ8N5A5 531 aaKnown RBP13.55□□□□□ -0.24
SMPD4-205ENST00000431183 AHDC1Q5TGY3 1603 aaPredicted RBP13.55□□□□□ -0.24
SMPD4-205ENST00000431183 COL9A3Q14050 684 aaPredicted RBP13.54□□□□□ -0.24
SMPD4-205ENST00000431183 FAM43AQ8N2R8 423 aa13.54□□□□□ -0.24
SMPD4-205ENST00000431183 NECAB1Q8N987 351 aa13.54□□□□□ -0.24
SMPD4-205ENST00000431183 AKAP2Q9Y2D5 859 aa13.54□□□□□ -0.24
SMPD4-205ENST00000431183 RBM8AQ9Y5S9 174 aaKnown RBP13.54□□□□□ -0.24
SMPD4-205ENST00000431183 ZKSCAN1P17029 563 aaPredicted RBP13.54□□□□□ -0.24
SMPD4-205ENST00000431183 RABL6Q3YEC7 729 aaPredicted RBP13.54□□□□□ -0.24
SMPD4-205ENST00000431183 BCL2L12Q9HB09 334 aa13.54□□□□□ -0.24
SMPD4-205ENST00000431183 ERVV-1B6SEH8 477 aa13.54□□□□□ -0.24
SMPD4-205ENST00000431183 SERPINB2P05120 415 aa13.54□□□□□ -0.24
SMPD4-205ENST00000431183 ADCK5Q3MIX3 580 aa13.54□□□□□ -0.24
SMPD4-205ENST00000431183 CDC5LQ99459 802 aaKnown RBP13.54□□□□□ -0.24
SMPD4-205ENST00000431183 NARFQ9UHQ1 456 aa13.54□□□□□ -0.24
SMPD4-205ENST00000431183 COL14A1Q05707 1796 aaKnown RBP13.54□□□□□ -0.24
SMPD4-205ENST00000431183 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-205ENST00000431183 NTSR2O95665 410 aa13.53□□□□□ -0.24
SMPD4-205ENST00000431183 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
SMPD4-205ENST00000431183 CCDC102BQ68D86 513 aa13.53□□□□□ -0.24
SMPD4-205ENST00000431183 MMP10P09238 476 aa13.53□□□□□ -0.24
SMPD4-205ENST00000431183 KCPQ6ZWJ8 1503 aa13.53□□□□□ -0.24
SMPD4-205ENST00000431183 C5P01031 1676 aa13.53□□□□□ -0.24
SMPD4-205ENST00000431183 PDE8BO95263 885 aa13.53□□□□□ -0.24
SMPD4-205ENST00000431183 SLC5A1P13866 664 aa13.53□□□□□ -0.24
SMPD4-205ENST00000431183 RPS8P62241 208 aaKnown RBP13.53□□□□□ -0.24
SMPD4-205ENST00000431183 ZNF827Q17R98 1081 aa13.53□□□□□ -0.24
SMPD4-205ENST00000431183 PROM2Q8N271 834 aa13.53□□□□□ -0.24
SMPD4-205ENST00000431183 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
SMPD4-205ENST00000431183 SGSM2O43147 1006 aa13.52□□□□□ -0.24
SMPD4-205ENST00000431183 STAP2Q9UGK3 403 aa13.52□□□□□ -0.24
SMPD4-205ENST00000431183 SCN11AQ9UI33 1791 aa13.52□□□□□ -0.24
SMPD4-205ENST00000431183 MAGEB6Q8N7X4 407 aa13.52□□□□□ -0.25
SMPD4-205ENST00000431183 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
SMPD4-205ENST00000431183 TTC41PQ6P2S7 1318 aa13.52□□□□□ -0.25
SMPD4-205ENST00000431183 MINDY4BA8MYZ0 360 aa13.52□□□□□ -0.25
SMPD4-205ENST00000431183 MCAMP43121 646 aa13.52□□□□□ -0.25
SMPD4-205ENST00000431183 UTYO14607 1347 aa13.51□□□□□ -0.25
SMPD4-205ENST00000431183 MRC1P22897 1456 aa13.51□□□□□ -0.25
SMPD4-205ENST00000431183 NAP1L5Q96NT1 182 aaPredicted RBP13.51□□□□□ -0.25
SMPD4-205ENST00000431183 INCENPQ9NQS7 918 aa13.51□□□□□ -0.25
SMPD4-205ENST00000431183 ZBTB7AO95365 584 aa13.51□□□□□ -0.25
SMPD4-205ENST00000431183 CCDC82Q8N4S0 544 aa13.51□□□□□ -0.25
SMPD4-205ENST00000431183 OSBPL3Q9H4L5 887 aa13.51□□□□□ -0.25
SMPD4-205ENST00000431183 LRRC37A3O60309 1634 aa13.51□□□□□ -0.25
SMPD4-205ENST00000431183 ABCC12Q96J65 1359 aa13.51□□□□□ -0.25
SMPD4-205ENST00000431183 K7ELQ4 463 aaPredicted RBP13.5□□□□□ -0.25
SMPD4-205ENST00000431183 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
SMPD4-205ENST00000431183 PSDA5PKW4 1024 aaPredicted RBP13.5□□□□□ -0.25
SMPD4-205ENST00000431183 PKP1Q13835 747 aa13.5□□□□□ -0.25
SMPD4-205ENST00000431183 COL23A1Q86Y22 540 aaPredicted RBP13.5□□□□□ -0.25
SMPD4-205ENST00000431183 CCDC83Q8IWF9 413 aa13.5□□□□□ -0.25
SMPD4-205ENST00000431183 CCDC144CPQ8IYA2 1237 aa13.5□□□□□ -0.25
SMPD4-205ENST00000431183 DDX11Q96FC9 970 aa13.5□□□□□ -0.25
SMPD4-205ENST00000431183 ISY1Q9ULR0 285 aaKnown RBP13.5□□□□□ -0.25
SMPD4-205ENST00000431183 ATP5JP18859 108 aa13.5□□□□□ -0.25
SMPD4-205ENST00000431183 TXNRD3Q86VQ6 643 aa13.5□□□□□ -0.25
SMPD4-205ENST00000431183 AIDAQ96BJ3 306 aa13.5□□□□□ -0.25
SMPD4-205ENST00000431183 KDM3BQ7LBC6 1761 aa13.49□□□□□ -0.25
SMPD4-205ENST00000431183 TRIM28Q13263 835 aaKnown RBP13.49□□□□□ -0.25
SMPD4-205ENST00000431183 RABEP1Q15276 862 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms