RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 EGFRP00533 1210 aa5.68□□□□□ -1.5
GYPB-201ENST00000429670 GRNP28799 593 aaKnown RBP5.68□□□□□ -1.5
GYPB-201ENST00000429670 FBLN7Q53RD9 439 aa5.68□□□□□ -1.5
GYPB-201ENST00000429670 ACAD11Q709F0 780 aa5.68□□□□□ -1.5
GYPB-201ENST00000429670 OGFOD1Q8N543 542 aa5.68□□□□□ -1.5
GYPB-201ENST00000429670 FBXL18Q96ME1 805 aa5.68□□□□□ -1.5
GYPB-201ENST00000429670 PIM2Q9P1W9 311 aa5.68□□□□□ -1.5
GYPB-201ENST00000429670 WDR64B1ANS9 1081 aa5.67□□□□□ -1.5
GYPB-201ENST00000429670 SART1O43290 800 aaKnown RBP5.67□□□□□ -1.5
GYPB-201ENST00000429670 MICAL2O94851 1124 aa5.67□□□□□ -1.5
GYPB-201ENST00000429670 FAM20CQ8IXL6 584 aa5.67□□□□□ -1.5
GYPB-201ENST00000429670 SIX5Q8N196 739 aa5.67□□□□□ -1.5
GYPB-201ENST00000429670 KRTAP4-11Q9BYQ6 195 aa5.67□□□□□ -1.5
GYPB-201ENST00000429670 ATG3Q9NT62 314 aa5.67□□□□□ -1.5
GYPB-201ENST00000429670 SUPT5HO00267 1087 aaKnown RBP5.66□□□□□ -1.5
GYPB-201ENST00000429670 SOX18P35713 384 aa5.66□□□□□ -1.5
GYPB-201ENST00000429670 BEND4Q6ZU67 534 aa5.66□□□□□ -1.5
GYPB-201ENST00000429670 CBLL1Q75N03 491 aa5.66□□□□□ -1.5
GYPB-201ENST00000429670 KCNF1Q9H3M0 494 aa5.66□□□□□ -1.5
GYPB-201ENST00000429670 LEMD3Q9Y2U8 911 aa5.66□□□□□ -1.5
GYPB-201ENST00000429670 USP17L3A6NCW0 530 aa5.65□□□□□ -1.5
GYPB-201ENST00000429670 USP17L4A6NCW7 530 aa5.65□□□□□ -1.5
GYPB-201ENST00000429670 LINC01387J3KSC0 135 aa5.65□□□□□ -1.5
GYPB-201ENST00000429670 HOXD8P13378 290 aaPredicted RBP5.65□□□□□ -1.5
GYPB-201ENST00000429670 DUOXA2Q1HG44 320 aa5.65□□□□□ -1.5
GYPB-201ENST00000429670 FAM117BQ6P1L5 589 aa5.65□□□□□ -1.5
GYPB-201ENST00000429670 USP17L2Q6R6M4 530 aa5.65□□□□□ -1.5
GYPB-201ENST00000429670 USP17L1Q7RTZ2 530 aa5.65□□□□□ -1.5
GYPB-201ENST00000429670 KLHL23Q8NBE8 558 aa5.65□□□□□ -1.5
GYPB-201ENST00000429670 GALNT11Q8NCW6 608 aa5.65□□□□□ -1.5
GYPB-201ENST00000429670 MKRN1Q9UHC7 482 aaKnown RBP5.65□□□□□ -1.5
GYPB-201ENST00000429670 HIF3AQ9Y2N7 669 aa5.65□□□□□ -1.5
GYPB-201ENST00000429670 A6NJR5 290 aa5.64□□□□□ -1.51
GYPB-201ENST00000429670 DBX1A6NMT0 343 aa5.64□□□□□ -1.51
GYPB-201ENST00000429670 XYLBO75191 536 aa5.64□□□□□ -1.51
GYPB-201ENST00000429670 BMP3P12645 472 aa5.64□□□□□ -1.51
GYPB-201ENST00000429670 ITGB5P18084 799 aa5.64□□□□□ -1.51
GYPB-201ENST00000429670 SEC13P55735 322 aa5.64□□□□□ -1.51
GYPB-201ENST00000429670 CPSF6Q16630 551 aaKnown RBP eCLIP5.64□□□□□ -1.51
GYPB-201ENST00000429670 C11orf91Q3C1V1 193 aa5.64□□□□□ -1.51
GYPB-201ENST00000429670 KIAA1211Q6ZU35 1233 aa5.64□□□□□ -1.51
GYPB-201ENST00000429670 TP53INP2Q8IXH6 220 aa5.64□□□□□ -1.51
GYPB-201ENST00000429670 KLK14Q9P0G3 267 aa5.64□□□□□ -1.51
GYPB-201ENST00000429670 TRIM33Q9UPN9 1127 aa5.64□□□□□ -1.51
GYPB-201ENST00000429670 RTCBQ9Y3I0 505 aaKnown RBP5.64□□□□□ -1.51
GYPB-201ENST00000429670 WISP1O95388 367 aa5.63□□□□□ -1.51
GYPB-201ENST00000429670 PRNPP04156 253 aa5.63□□□□□ -1.51
GYPB-201ENST00000429670 HOXA10P31260 410 aaPredicted RBP5.63□□□□□ -1.51
GYPB-201ENST00000429670 ANKRD34AQ69YU3 496 aa5.63□□□□□ -1.51
GYPB-201ENST00000429670 NSUN5Q96P11 429 aaKnown RBP5.63□□□□□ -1.51
GYPB-201ENST00000429670 HINFPQ9BQA5 517 aa5.63□□□□□ -1.51
GYPB-201ENST00000429670 CCDC39Q9UFE4 941 aa5.63□□□□□ -1.51
GYPB-201ENST00000429670 MMP20O60882 483 aa5.62□□□□□ -1.51
GYPB-201ENST00000429670 DKK1O94907 266 aa5.62□□□□□ -1.51
GYPB-201ENST00000429670 FOSL1P15407 271 aa5.62□□□□□ -1.51
GYPB-201ENST00000429670 IGFBP4P22692 258 aa5.62□□□□□ -1.51
GYPB-201ENST00000429670 CDC27P30260 824 aa5.62□□□□□ -1.51
GYPB-201ENST00000429670 DGKZQ13574 1117 aa5.62□□□□□ -1.51
GYPB-201ENST00000429670 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
GYPB-201ENST00000429670 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.62□□□□□ -1.51
GYPB-201ENST00000429670 VSIG10LQ86VR7 867 aa5.62□□□□□ -1.51
GYPB-201ENST00000429670 CMTR1Q8N1G2 835 aaKnown RBP5.62□□□□□ -1.51
GYPB-201ENST00000429670 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.62□□□□□ -1.512e-23■■■■■ 397.5
GYPB-201ENST00000429670 KCNK4Q9NYG8 393 aa5.62□□□□□ -1.51
GYPB-201ENST00000429670 FAM177BA6PVY3 158 aa5.61□□□□□ -1.51
GYPB-201ENST00000429670 OPLAHO14841 1288 aa5.61□□□□□ -1.51
GYPB-201ENST00000429670 RASA1P20936 1047 aa5.61□□□□□ -1.51
GYPB-201ENST00000429670 AGBL5Q8NDL9 886 aa5.61□□□□□ -1.51
GYPB-201ENST00000429670 ZNF594Q96JF6 807 aaPredicted RBP5.61□□□□□ -1.51
GYPB-201ENST00000429670 SPACA7Q96KW9 195 aa5.61□□□□□ -1.51
GYPB-201ENST00000429670 OSBPL1AQ9BXW6 950 aa5.61□□□□□ -1.51
GYPB-201ENST00000429670 KRTAP4-5Q9BYR2 181 aa5.61□□□□□ -1.51
GYPB-201ENST00000429670 FSCN2O14926 492 aa5.6□□□□□ -1.51
GYPB-201ENST00000429670 ATP9BO43861 1147 aa5.6□□□□□ -1.51
GYPB-201ENST00000429670 SMNDC1O75940 238 aaKnown RBP eCLIP5.6□□□□□ -1.51
GYPB-201ENST00000429670 MCM6Q14566 821 aa5.6□□□□□ -1.51
GYPB-201ENST00000429670 MSMPQ1L6U9 139 aa5.6□□□□□ -1.51
GYPB-201ENST00000429670 MFSD14AQ96MC6 490 aa5.6□□□□□ -1.51
GYPB-201ENST00000429670 VTI1AQ96AJ9 217 aa5.59□□□□□ -1.51
GYPB-201ENST00000429670 RNF208Q9H0X6 261 aa5.59□□□□□ -1.51
GYPB-201ENST00000429670 BSDC1Q9NW68 430 aaPredicted RBP5.59□□□□□ -1.51
GYPB-201ENST00000429670 BIN1O00499 593 aa5.58□□□□□ -1.52
GYPB-201ENST00000429670 PKN1Q16512 942 aa5.58□□□□□ -1.52
GYPB-201ENST00000429670 CEP135Q66GS9 1140 aa5.58□□□□□ -1.52
GYPB-201ENST00000429670 NLRP13Q86W25 1043 aa5.58□□□□□ -1.52
GYPB-201ENST00000429670 MYO19Q96H55 970 aa5.58□□□□□ -1.52
GYPB-201ENST00000429670 METTL22Q9BUU2 404 aaPredicted RBP5.58□□□□□ -1.52
GYPB-201ENST00000429670 LACRTQ9GZZ8 138 aa5.58□□□□□ -1.52
GYPB-201ENST00000429670 SEC31BQ9NQW1 1179 aa5.58□□□□□ -1.52
GYPB-201ENST00000429670 COG6Q9Y2V7 657 aa5.58□□□□□ -1.52
GYPB-201ENST00000429670 TM4SF5O14894 197 aa5.57□□□□□ -1.52
GYPB-201ENST00000429670 GAS2O43903 313 aaKnown RBP5.57□□□□□ -1.52
GYPB-201ENST00000429670 FARP2O94887 1054 aaPredicted RBP5.57□□□□□ -1.52
GYPB-201ENST00000429670 MAP4P27816 1152 aaKnown RBP5.57□□□□□ -1.52
GYPB-201ENST00000429670 HYAL2Q12891 473 aa5.57□□□□□ -1.52
GYPB-201ENST00000429670 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
GYPB-201ENST00000429670 FDX2Q6P4F2 183 aa5.57□□□□□ -1.52
GYPB-201ENST00000429670 TXNDC11Q6PKC3 985 aa5.57□□□□□ -1.52
GYPB-201ENST00000429670 SPOCD1Q6ZMY3 1216 aa5.57□□□□□ -1.52
GYPB-201ENST00000429670 RGL4Q8IZJ4 473 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms