RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 SH3TC1Q8TE82 1336 aa13.59□□□□□ -0.23
LINC01238-203ENST00000429456 LAMA4Q16363 1823 aa13.59□□□□□ -0.23
LINC01238-203ENST00000429456 A0A087WZG4 1122 aa13.59□□□□□ -0.23
LINC01238-203ENST00000429456 GTF2F1P35269 517 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC01238-203ENST00000429456 BRF1Q92994 677 aa13.59□□□□□ -0.23
LINC01238-203ENST00000429456 PKD1L3Q7Z443 1732 aa13.58□□□□□ -0.23
LINC01238-203ENST00000429456 ATP5J2-PTCD1G3V325 749 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 CYP27B1O15528 508 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 PTCD1O75127 700 aaKnown RBP13.58□□□□□ -0.24
LINC01238-203ENST00000429456 PROSER2Q86WR7 435 aaPredicted RBP13.58□□□□□ -0.24
LINC01238-203ENST00000429456 CKAP2LQ8IYA6 745 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 KBTBD3Q8NAB2 608 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 PLBD2Q8NHP8 589 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 SMARCC2Q8TAQ2 1214 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 CBX8Q9HC52 389 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 PYCARDQ9ULZ3 195 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 GLI3P10071 1580 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 LAMB4A4D0S4 1761 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 ANO6Q4KMQ2 910 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 DDX46Q7L014 1031 aaKnown RBP13.58□□□□□ -0.24
LINC01238-203ENST00000429456 LUZP1Q86V48 1076 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 SPC24Q8NBT2 197 aa13.58□□□□□ -0.24
LINC01238-203ENST00000429456 ZSCAN16Q9H4T2 348 aaPredicted RBP13.58□□□□□ -0.24
LINC01238-203ENST00000429456 PALLDQ8WX93 1383 aa13.57□□□□□ -0.24
LINC01238-203ENST00000429456 PFKFB2O60825 505 aa13.57□□□□□ -0.24
LINC01238-203ENST00000429456 NR1I2O75469 434 aa13.57□□□□□ -0.24
LINC01238-203ENST00000429456 HSP90B1P14625 803 aaKnown RBP13.57□□□□□ -0.24
LINC01238-203ENST00000429456 SCRN1Q12765 414 aa13.57□□□□□ -0.24
LINC01238-203ENST00000429456 STOX1Q6ZVD7 989 aa13.57□□□□□ -0.24
LINC01238-203ENST00000429456 LLPHQ9BRT6 129 aaKnown RBP13.57□□□□□ -0.24
LINC01238-203ENST00000429456 C19orf44Q9H6X5 657 aa13.57□□□□□ -0.24
LINC01238-203ENST00000429456 MYH15Q9Y2K3 1946 aa13.57□□□□□ -0.24
LINC01238-203ENST00000429456 ADAMTSL3P82987 1691 aa13.57□□□□□ -0.24
LINC01238-203ENST00000429456 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
LINC01238-203ENST00000429456 FOXO4P98177 505 aa13.56□□□□□ -0.24
LINC01238-203ENST00000429456 LMBR1LQ6UX01 489 aa13.56□□□□□ -0.24
LINC01238-203ENST00000429456 HELLSQ9NRZ9 838 aa13.56□□□□□ -0.24
LINC01238-203ENST00000429456 H3BQV1 296 aa13.56□□□□□ -0.24
LINC01238-203ENST00000429456 H7C1W4 665 aa13.56□□□□□ -0.24
LINC01238-203ENST00000429456 IFFO2Q5TF58 517 aa13.56□□□□□ -0.24
LINC01238-203ENST00000429456 ATG9AQ7Z3C6 839 aa13.56□□□□□ -0.24
LINC01238-203ENST00000429456 TICAM2Q86XR7 235 aa13.56□□□□□ -0.24
LINC01238-203ENST00000429456 PIAS4Q8N2W9 510 aaPredicted RBP13.56□□□□□ -0.24
LINC01238-203ENST00000429456 TDRD7Q8NHU6 1098 aaKnown RBP13.56□□□□□ -0.24
LINC01238-203ENST00000429456 BICD2Q8TD16 824 aa13.56□□□□□ -0.24
LINC01238-203ENST00000429456 CSB-PGBD3P0DP91 1061 aa13.55□□□□□ -0.24
LINC01238-203ENST00000429456 DHX32Q7L7V1 743 aaKnown RBP13.55□□□□□ -0.24
LINC01238-203ENST00000429456 DDX11Q96FC9 970 aa13.55□□□□□ -0.24
LINC01238-203ENST00000429456 DSCC1Q9BVC3 393 aa13.55□□□□□ -0.24
LINC01238-203ENST00000429456 GPR108Q9NPR9 543 aa13.55□□□□□ -0.24
LINC01238-203ENST00000429456 CFAP45Q9UL16 551 aa13.55□□□□□ -0.24
LINC01238-203ENST00000429456 TMEM94Q12767 1356 aa13.55□□□□□ -0.24
LINC01238-203ENST00000429456 ADD1P35611 737 aaKnown RBP13.55□□□□□ -0.24
LINC01238-203ENST00000429456 CABP4P57796 275 aa13.55□□□□□ -0.24
LINC01238-203ENST00000429456 EXOSC10Q01780 885 aaKnown RBP13.55□□□□□ -0.24
LINC01238-203ENST00000429456 NAA16Q6N069 864 aaPredicted RBP13.55□□□□□ -0.24
LINC01238-203ENST00000429456 PLA2G4DQ86XP0 818 aa13.55□□□□□ -0.24
LINC01238-203ENST00000429456 NSUN7Q8NE18 718 aaKnown RBP13.55□□□□□ -0.24
LINC01238-203ENST00000429456 LRRC2Q9BYS8 371 aa13.55□□□□□ -0.24
LINC01238-203ENST00000429456 AGXT2Q9BYV1 514 aa13.55□□□□□ -0.24
LINC01238-203ENST00000429456 ZMYND15Q9H091 742 aa13.55□□□□□ -0.24
LINC01238-203ENST00000429456 PTGS1P23219 599 aa13.54□□□□□ -0.24
LINC01238-203ENST00000429456 ZMYM1Q5SVZ6 1142 aa13.54□□□□□ -0.24
LINC01238-203ENST00000429456 PAG1Q9NWQ8 432 aa13.54□□□□□ -0.24
LINC01238-203ENST00000429456 PARP4Q9UKK3 1724 aaKnown RBP13.54□□□□□ -0.24
LINC01238-203ENST00000429456 NUP188Q5SRE5 1749 aa13.54□□□□□ -0.24
LINC01238-203ENST00000429456 NBPF26B4DH59 902 aa13.54□□□□□ -0.24
LINC01238-203ENST00000429456 CTDNEP1O95476 244 aa13.54□□□□□ -0.24
LINC01238-203ENST00000429456 ZNF75DP51815 510 aa13.54□□□□□ -0.24
LINC01238-203ENST00000429456 NBPF14Q5TI25 921 aa13.54□□□□□ -0.24
LINC01238-203ENST00000429456 NBPF10Q6P3W6 841 aaKnown RBP13.54□□□□□ -0.24
LINC01238-203ENST00000429456 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.54□□□□□ -0.24
LINC01238-203ENST00000429456 NBPF15Q8N660 670 aa13.54□□□□□ -0.24
LINC01238-203ENST00000429456 TJP1Q07157 1748 aa13.53□□□□□ -0.24
LINC01238-203ENST00000429456 A0A0U1RQG5 324 aaPredicted RBP13.53□□□□□ -0.24
LINC01238-203ENST00000429456 GOLIM4O00461 696 aa13.53□□□□□ -0.24
LINC01238-203ENST00000429456 CAVIN2O95810 425 aa13.53□□□□□ -0.24
LINC01238-203ENST00000429456 ZNF165P49910 485 aa13.53□□□□□ -0.24
LINC01238-203ENST00000429456 RCOR1Q9UKL0 485 aa13.53□□□□□ -0.24
LINC01238-203ENST00000429456 IL15P40933 162 aaPredicted RBP13.52□□□□□ -0.24
LINC01238-203ENST00000429456 APOBRQ0VD83 1088 aa13.52□□□□□ -0.24
LINC01238-203ENST00000429456 SLFNL1Q499Z3 407 aa13.52□□□□□ -0.24
LINC01238-203ENST00000429456 CCDC186Q7Z3E2 898 aa13.52□□□□□ -0.24
LINC01238-203ENST00000429456 ZNF710Q8N1W2 664 aa13.52□□□□□ -0.24
LINC01238-203ENST00000429456 NEUROD6Q96NK8 337 aa13.52□□□□□ -0.24
LINC01238-203ENST00000429456 DNAJC25Q9H1X3 360 aa13.52□□□□□ -0.24
LINC01238-203ENST00000429456 CCDC9Q9Y3X0 531 aaKnown RBP13.52□□□□□ -0.24
LINC01238-203ENST00000429456 SPEF2Q9C093 1822 aa13.52□□□□□ -0.25
LINC01238-203ENST00000429456 PTPDC1A2A3K4 754 aa13.52□□□□□ -0.25
LINC01238-203ENST00000429456 TIMM10P62072 90 aa13.52□□□□□ -0.25
LINC01238-203ENST00000429456 DDX17Q92841 729 aaKnown RBP13.52□□□□□ -0.25
LINC01238-203ENST00000429456 TRIM5Q9C035 493 aa13.52□□□□□ -0.25
LINC01238-203ENST00000429456 CWC25Q9NXE8 425 aaPredicted RBP13.52□□□□□ -0.25
LINC01238-203ENST00000429456 KIF3AQ9Y496 699 aa13.52□□□□□ -0.25
LINC01238-203ENST00000429456 SALL1Q9NSC2 1324 aa13.52□□□□□ -0.25
LINC01238-203ENST00000429456 E7EWF7 191 aa13.51□□□□□ -0.25
LINC01238-203ENST00000429456 HSPD1P10809 573 aaKnown RBP13.51□□□□□ -0.25
LINC01238-203ENST00000429456 CHRNA2Q15822 529 aa13.51□□□□□ -0.25
LINC01238-203ENST00000429456 TTLL7Q6ZT98 887 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms