RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 SPDYE4A6NLX3 237 aa19.87■□□□□ 0.77
SMARCA4-203ENST00000429416 TBC1D9Q6ZT07 1266 aa19.87■□□□□ 0.77
SMARCA4-203ENST00000429416 DACH1Q9UI36 760 aa19.87■□□□□ 0.77
SMARCA4-203ENST00000429416 INSRP06213 1382 aa19.86■□□□□ 0.77
SMARCA4-203ENST00000429416 USP19O94966 1318 aa19.86■□□□□ 0.77
SMARCA4-203ENST00000429416 IL17REQ8NFR9 667 aa19.86■□□□□ 0.77
SMARCA4-203ENST00000429416 GSE1Q14687 1217 aa19.86■□□□□ 0.77
SMARCA4-203ENST00000429416 LIMCH1Q9UPQ0 1083 aa19.86■□□□□ 0.77
SMARCA4-203ENST00000429416 CRKLP46109 303 aaKnown RBP19.86■□□□□ 0.77
SMARCA4-203ENST00000429416 PICK1Q9NRD5 415 aa19.86■□□□□ 0.77
SMARCA4-203ENST00000429416 HMGN5P82970 282 aaKnown RBP19.86■□□□□ 0.77
SMARCA4-203ENST00000429416 LETM1O95202 739 aaPredicted RBP19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 TTC6Q86TZ1 520 aa19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 TCEANC2Q96MN5 208 aa19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 KLF18A0A0U1RQI7 1052 aa19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 CEP85Q6P2H3 762 aa19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 CNNM2Q9H8M5 875 aa19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 ORC3Q9UBD5 711 aaPredicted RBP19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 PCDHB15Q9Y5E8 787 aa19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 SBNO2Q9Y2G9 1366 aa19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 RPS8P62241 208 aaKnown RBP19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 H7C1D1 291 aa19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 CCDC178Q5BJE1 867 aa19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 CCDC39Q9UFE4 941 aa19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 PRR36Q9H6K5 1346 aa19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 SDSP20132 328 aa19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 CKAP2LQ8IYA6 745 aa19.85■□□□□ 0.77
SMARCA4-203ENST00000429416 ADGBQ8N7X0 1667 aa19.84■□□□□ 0.77
SMARCA4-203ENST00000429416 KDM5CP41229 1560 aa19.84■□□□□ 0.77
SMARCA4-203ENST00000429416 TCIRG1Q13488 830 aa19.84■□□□□ 0.77
SMARCA4-203ENST00000429416 BRF1Q92994 677 aa19.84■□□□□ 0.77
SMARCA4-203ENST00000429416 PREX2Q70Z35 1606 aa19.84■□□□□ 0.77
SMARCA4-203ENST00000429416 RNF113AO15541 343 aaKnown RBP19.84■□□□□ 0.77
SMARCA4-203ENST00000429416 SEPT11Q9NVA2 429 aaKnown RBP19.84■□□□□ 0.77
SMARCA4-203ENST00000429416 HMG20BQ9P0W2 317 aa19.84■□□□□ 0.77
SMARCA4-203ENST00000429416 TTLL7Q6ZT98 887 aa19.84■□□□□ 0.77
SMARCA4-203ENST00000429416 HEATR3Q7Z4Q2 680 aa19.83■□□□□ 0.77
SMARCA4-203ENST00000429416 TRAK2O60296 914 aa19.83■□□□□ 0.77
SMARCA4-203ENST00000429416 GNAT2P19087 354 aa19.83■□□□□ 0.77
SMARCA4-203ENST00000429416 BMP2KLQ5H9B9 411 aa19.83■□□□□ 0.77
SMARCA4-203ENST00000429416 ZBTB43O43298 467 aa19.83■□□□□ 0.76
SMARCA4-203ENST00000429416 GCKRQ14397 625 aa19.83■□□□□ 0.76
SMARCA4-203ENST00000429416 SMARCE1Q969G3 411 aa19.83■□□□□ 0.76
SMARCA4-203ENST00000429416 GIGYF1O75420 1035 aaPredicted RBP19.82■□□□□ 0.76
SMARCA4-203ENST00000429416 NMIQ13287 307 aaPredicted RBP19.82■□□□□ 0.76
SMARCA4-203ENST00000429416 ZNF526Q8TF50 670 aaPredicted RBP19.82■□□□□ 0.76
SMARCA4-203ENST00000429416 TRIM35Q9UPQ4 493 aa19.82■□□□□ 0.76
SMARCA4-203ENST00000429416 MBD4O95243 580 aa19.82■□□□□ 0.76
SMARCA4-203ENST00000429416 TRAF1Q13077 416 aa19.82■□□□□ 0.76
SMARCA4-203ENST00000429416 ZNHIT6Q9NWK9 470 aaKnown RBP19.82■□□□□ 0.76
SMARCA4-203ENST00000429416 SPATA31A3Q5VYP0 1347 aa19.82■□□□□ 0.76
SMARCA4-203ENST00000429416 TCP10Q12799 353 aa19.82■□□□□ 0.76
SMARCA4-203ENST00000429416 NFKBIBQ15653 356 aa19.82■□□□□ 0.76
SMARCA4-203ENST00000429416 NUCB1Q02818 461 aa19.82■□□□□ 0.76
SMARCA4-203ENST00000429416 DLGAP5Q15398 846 aa19.81■□□□□ 0.76
SMARCA4-203ENST00000429416 FBXO3Q9UK99 471 aa19.81■□□□□ 0.76
SMARCA4-203ENST00000429416 RBM8AQ9Y5S9 174 aaKnown RBP19.81■□□□□ 0.76
SMARCA4-203ENST00000429416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.81■□□□□ 0.76
SMARCA4-203ENST00000429416 HDAC1Q13547 482 aaPredicted RBP19.81■□□□□ 0.76
SMARCA4-203ENST00000429416 ZYXQ15942 572 aaKnown RBP19.81■□□□□ 0.76
SMARCA4-203ENST00000429416 ERBB3P21860 1342 aa19.81■□□□□ 0.76
SMARCA4-203ENST00000429416 RLBP1P12271 317 aa19.81■□□□□ 0.76
SMARCA4-203ENST00000429416 SMARCC2Q8TAQ2 1214 aa19.81■□□□□ 0.76
SMARCA4-203ENST00000429416 WDR66Q8TBY9 1149 aa19.81■□□□□ 0.76
SMARCA4-203ENST00000429416 XAGE2Q96GT9 111 aa19.81■□□□□ 0.76
SMARCA4-203ENST00000429416 TMTC2Q8N394 836 aa19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 CNKSR1Q969H4 720 aa19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 SUCLG2Q96I99 432 aa19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 DEF6Q9H4E7 631 aa19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 ABCC3O15438 1527 aa19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 PPP1R12BO60237 982 aaPredicted RBP19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 GTF2IP78347 998 aa19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 MAST3O60307 1309 aa19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 CCDC192P0DO97 292 aa19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 TRIM21P19474 475 aaKnown RBP19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 TSPY26PQ9H489 355 aa19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 ADGRL3Q9HAR2 1447 aa19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 TCP11L1Q9NUJ3 509 aa19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 ZBTB1Q9Y2K1 713 aa19.8■□□□□ 0.76
SMARCA4-203ENST00000429416 PRDM15P57071 1507 aaPredicted RBP19.79■□□□□ 0.76
SMARCA4-203ENST00000429416 RTN1Q16799 776 aa19.79■□□□□ 0.76
SMARCA4-203ENST00000429416 PDIA4P13667 645 aaKnown RBP19.79■□□□□ 0.76
SMARCA4-203ENST00000429416 DBNDD2Q9BQY9 259 aa19.79■□□□□ 0.76
SMARCA4-203ENST00000429416 NBPF7P0C2Y1 421 aaPredicted RBP19.79■□□□□ 0.76
SMARCA4-203ENST00000429416 USP6P35125 1406 aa19.79■□□□□ 0.76
SMARCA4-203ENST00000429416 HSPA1LP34931 641 aa19.78■□□□□ 0.76
SMARCA4-203ENST00000429416 GNAQP50148 359 aa19.78■□□□□ 0.76
SMARCA4-203ENST00000429416 RBM6P78332 1123 aaKnown RBP19.78■□□□□ 0.76
SMARCA4-203ENST00000429416 TMOD4Q9NZQ9 345 aa19.78■□□□□ 0.76
SMARCA4-203ENST00000429416 IDEP14735 1019 aa19.78■□□□□ 0.76
SMARCA4-203ENST00000429416 DOK7Q18PE1 504 aa19.78■□□□□ 0.76
SMARCA4-203ENST00000429416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.78■□□□□ 0.762e-6■■■□□ 14.7
SMARCA4-203ENST00000429416 PLXNC1O60486 1568 aa19.78■□□□□ 0.76
SMARCA4-203ENST00000429416 NOM1Q5C9Z4 860 aaKnown RBP19.78■□□□□ 0.76
SMARCA4-203ENST00000429416 KLHL10Q6JEL2 608 aa19.78■□□□□ 0.76
SMARCA4-203ENST00000429416 CHST3Q7LGC8 479 aa19.78■□□□□ 0.76
SMARCA4-203ENST00000429416 LPIN2Q92539 896 aa19.78■□□□□ 0.76
SMARCA4-203ENST00000429416 NAPAP54920 295 aa19.78■□□□□ 0.76
SMARCA4-203ENST00000429416 MAP3K4Q9Y6R4 1608 aa19.78■□□□□ 0.76
SMARCA4-203ENST00000429416 CCDC173Q0VFZ6 552 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 253.5 ms