RNA–Protein interactions for RNA: ENST00000429339.5

RAE1-205, Transcript of ribonucleic acid export 1, humanhuman

TSL 5

Gene RAE1, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-205ENST00000429339 VIL1P09327 827 aaKnown RBP13.56□□□□□ -0.24
RAE1-205ENST00000429339 TM4SF4P48230 202 aa13.56□□□□□ -0.24
RAE1-205ENST00000429339 ZNF280AP59817 542 aaPredicted RBP13.56□□□□□ -0.24
RAE1-205ENST00000429339 DCPSQ96C86 337 aaKnown RBP13.56□□□□□ -0.24
RAE1-205ENST00000429339 UTP14AQ9BVJ6 771 aaKnown RBP13.56□□□□□ -0.24
RAE1-205ENST00000429339 ZNF609O15014 1411 aa13.56□□□□□ -0.24
RAE1-205ENST00000429339 SCARF1Q14162 830 aa13.55□□□□□ -0.24
RAE1-205ENST00000429339 PKN2Q16513 984 aaKnown RBP13.55□□□□□ -0.24
RAE1-205ENST00000429339 KIF6Q6ZMV9 814 aa13.55□□□□□ -0.24
RAE1-205ENST00000429339 SSC5DA1L4H1 1573 aa13.54□□□□□ -0.24
RAE1-205ENST00000429339 WASHC4Q2M389 1173 aa13.54□□□□□ -0.24
RAE1-205ENST00000429339 NOM1Q5C9Z4 860 aaKnown RBP13.54□□□□□ -0.24
RAE1-205ENST00000429339 OTOP1Q7RTM1 612 aa13.54□□□□□ -0.24
RAE1-205ENST00000429339 TBC1D16Q8TBP0 767 aa13.54□□□□□ -0.24
RAE1-205ENST00000429339 GCC1Q96CN9 775 aa13.54□□□□□ -0.24
RAE1-205ENST00000429339 OTUD5Q96G74 571 aa13.54□□□□□ -0.24
RAE1-205ENST00000429339 MXD3Q9BW11 206 aa13.54□□□□□ -0.24
RAE1-205ENST00000429339 CFHR5Q9BXR6 569 aa13.54□□□□□ -0.24
RAE1-205ENST00000429339 HDAC9Q9UKV0 1011 aa13.54□□□□□ -0.24
RAE1-205ENST00000429339 NBPF9Q3BBW0 867 aa13.53□□□□□ -0.24
RAE1-205ENST00000429339 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
RAE1-205ENST00000429339 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
RAE1-205ENST00000429339 NSFL1CQ9UNZ2 370 aaKnown RBP13.53□□□□□ -0.24
RAE1-205ENST00000429339 UNC80Q8N2C7 3258 aa13.52□□□□□ -0.24
RAE1-205ENST00000429339 RPS12P25398 132 aaKnown RBP13.52□□□□□ -0.25
RAE1-205ENST00000429339 PTPN12Q05209 780 aaKnown RBP13.52□□□□□ -0.25
RAE1-205ENST00000429339 KRT24Q2M2I5 525 aa13.52□□□□□ -0.25
RAE1-205ENST00000429339 SULF1Q8IWU6 871 aa13.52□□□□□ -0.25
RAE1-205ENST00000429339 TIMELESSQ9UNS1 1208 aa13.52□□□□□ -0.25
RAE1-205ENST00000429339 IGF2BP3O00425 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
RAE1-205ENST00000429339 FKTNO75072 461 aa13.51□□□□□ -0.25
RAE1-205ENST00000429339 PLEKHF1Q96S99 279 aa13.51□□□□□ -0.25
RAE1-205ENST00000429339 AOX1Q06278 1338 aa13.5□□□□□ -0.25
RAE1-205ENST00000429339 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
RAE1-205ENST00000429339 U2AF1L5P0DN76 240 aaPredicted RBP13.5□□□□□ -0.25
RAE1-205ENST00000429339 U2AF1Q01081 240 aaKnown RBP eCLIP13.5□□□□□ -0.25
RAE1-205ENST00000429339 DDX46Q7L014 1031 aaKnown RBP13.5□□□□□ -0.25
RAE1-205ENST00000429339 XAGE3Q8WTP9 111 aa13.5□□□□□ -0.25
RAE1-205ENST00000429339 RTF1Q92541 710 aaKnown RBP13.5□□□□□ -0.25
RAE1-205ENST00000429339 SEC31BQ9NQW1 1179 aa13.5□□□□□ -0.25
RAE1-205ENST00000429339 OTOFQ9HC10 1997 aa13.5□□□□□ -0.25
RAE1-205ENST00000429339 C6orf229H3BNL8 230 aa13.49□□□□□ -0.25
RAE1-205ENST00000429339 GJA5P36382 358 aa13.49□□□□□ -0.25
RAE1-205ENST00000429339 SF3B3Q15393 1217 aaKnown RBP13.49□□□□□ -0.25
RAE1-205ENST00000429339 COPS6Q7L5N1 327 aa13.49□□□□□ -0.25
RAE1-205ENST00000429339 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
RAE1-205ENST00000429339 ARMC5Q96C12 935 aa13.49□□□□□ -0.25
RAE1-205ENST00000429339 FAM89AQ96GI7 184 aa13.49□□□□□ -0.25
RAE1-205ENST00000429339 TRMT112Q9UI30 125 aaKnown RBP13.49□□□□□ -0.25
RAE1-205ENST00000429339 TRIM17Q9Y577 477 aa13.49□□□□□ -0.25
RAE1-205ENST00000429339 SPEF2Q9C093 1822 aa13.48□□□□□ -0.25
RAE1-205ENST00000429339 SH3TC1Q8TE82 1336 aa13.48□□□□□ -0.25
RAE1-205ENST00000429339 H0YGN5 161 aa13.48□□□□□ -0.25
RAE1-205ENST00000429339 PPP2R1AP30153 589 aa13.48□□□□□ -0.25
RAE1-205ENST00000429339 FKBP1BP68106 108 aa13.48□□□□□ -0.25
RAE1-205ENST00000429339 TCIRG1Q13488 830 aa13.48□□□□□ -0.25
RAE1-205ENST00000429339 LDLRAD1Q5T700 205 aa13.48□□□□□ -0.25
RAE1-205ENST00000429339 RSBN1LQ6PCB5 846 aaPredicted RBP13.48□□□□□ -0.25
RAE1-205ENST00000429339 CLMNQ96JQ2 1002 aa13.48□□□□□ -0.25
RAE1-205ENST00000429339 MYOZ2Q9NPC6 264 aa13.48□□□□□ -0.25
RAE1-205ENST00000429339 VCANP13611 3396 aa13.48□□□□□ -0.25
RAE1-205ENST00000429339 ERBB4Q15303 1308 aa13.47□□□□□ -0.25
RAE1-205ENST00000429339 EIF2S2P20042 333 aaKnown RBP13.47□□□□□ -0.25
RAE1-205ENST00000429339 PRKG1Q13976 671 aa13.47□□□□□ -0.25
RAE1-205ENST00000429339 RTL5Q5HYW3 569 aaPredicted RBP13.47□□□□□ -0.25
RAE1-205ENST00000429339 SPRYD7Q5W111 196 aa13.47□□□□□ -0.25
RAE1-205ENST00000429339 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
RAE1-205ENST00000429339 CD99L2Q8TCZ2 262 aa13.47□□□□□ -0.25
RAE1-205ENST00000429339 ISCA1Q9BUE6 129 aa13.47□□□□□ -0.25
RAE1-205ENST00000429339 PRO3102Q9H379 93 aa13.47□□□□□ -0.25
RAE1-205ENST00000429339 PTPN22Q9Y2R2 807 aa13.47□□□□□ -0.25
RAE1-205ENST00000429339 PCDHAC2Q9Y5I4 1007 aa13.47□□□□□ -0.25
RAE1-205ENST00000429339 PITPNM2Q9BZ72 1349 aa13.46□□□□□ -0.25
RAE1-205ENST00000429339 SPTBN5Q9NRC6 3674 aaKnown RBP13.46□□□□□ -0.25
RAE1-205ENST00000429339 DLL1O00548 723 aa13.46□□□□□ -0.25
RAE1-205ENST00000429339 AIMP1Q12904 312 aaKnown RBP13.46□□□□□ -0.25
RAE1-205ENST00000429339 PTPN18Q99952 460 aa13.46□□□□□ -0.25
RAE1-205ENST00000429339 ATP5J2-PTCD1G3V325 749 aa13.45□□□□□ -0.26
RAE1-205ENST00000429339 WNT10BO00744 389 aa13.45□□□□□ -0.26
RAE1-205ENST00000429339 SASH1O94885 1247 aa13.45□□□□□ -0.26
RAE1-205ENST00000429339 ZBED3Q96IU2 234 aaPredicted RBP13.45□□□□□ -0.26
RAE1-205ENST00000429339 PODXL2Q9NZ53 605 aa13.45□□□□□ -0.26
RAE1-205ENST00000429339 RBM27Q9P2N5 1060 aaKnown RBP13.45□□□□□ -0.26
RAE1-205ENST00000429339 SOX1O00570 391 aaPredicted RBP13.44□□□□□ -0.26
RAE1-205ENST00000429339 TXNRD3Q86VQ6 643 aa13.44□□□□□ -0.26
RAE1-205ENST00000429339 IFNL1Q8IU54 200 aa13.44□□□□□ -0.26
RAE1-205ENST00000429339 AGBL3Q8NEM8 1001 aa13.44□□□□□ -0.26
RAE1-205ENST00000429339 ZNF333Q96JL9 665 aa13.44□□□□□ -0.26
RAE1-205ENST00000429339 UFL1O94874 794 aa13.43□□□□□ -0.26
RAE1-205ENST00000429339 USP17L8P0C7I0 530 aa13.43□□□□□ -0.26
RAE1-205ENST00000429339 CRHR2Q13324 411 aa13.43□□□□□ -0.26
RAE1-205ENST00000429339 DACT2Q5SW24 774 aa13.43□□□□□ -0.26
RAE1-205ENST00000429339 JARID2Q92833 1246 aaPredicted RBP13.43□□□□□ -0.26
RAE1-205ENST00000429339 SHISA4Q96DD7 197 aa13.43□□□□□ -0.26
RAE1-205ENST00000429339 TMX4Q9H1E5 349 aaPredicted RBP13.43□□□□□ -0.26
RAE1-205ENST00000429339 KLRK1P26718 216 aa13.42□□□□□ -0.26
RAE1-205ENST00000429339 RPS8P62241 208 aaKnown RBP13.42□□□□□ -0.26
RAE1-205ENST00000429339 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
RAE1-205ENST00000429339 TMC4Q7Z404 712 aa13.42□□□□□ -0.26
RAE1-205ENST00000429339 ALPK3Q96L96 1907 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms