RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 ADCK5Q3MIX3 580 aa23.72■■□□□ 1.39
CASC4-203ENST00000429162 CCDC158Q5M9N0 1113 aa23.72■■□□□ 1.39
CASC4-203ENST00000429162 RUFY3Q7L099 469 aa23.72■■□□□ 1.39
CASC4-203ENST00000429162 GORABQ5T7V8 394 aa23.72■■□□□ 1.39
CASC4-203ENST00000429162 TTC39AQ5SRH9 613 aa23.71■■□□□ 1.39
CASC4-203ENST00000429162 USPL1Q5W0Q7 1092 aa23.71■■□□□ 1.39
CASC4-203ENST00000429162 METTL24Q5JXM2 366 aa23.71■■□□□ 1.39
CASC4-203ENST00000429162 HELLSQ9NRZ9 838 aa23.71■■□□□ 1.39
CASC4-203ENST00000429162 ZDHHC9Q9Y397 364 aa23.71■■□□□ 1.39
CASC4-203ENST00000429162 U3KPZ7 1027 aaPredicted RBP23.71■■□□□ 1.39
CASC4-203ENST00000429162 BCORQ6W2J9 1755 aa23.7■■□□□ 1.38
CASC4-203ENST00000429162 PARP10Q53GL7 1025 aa23.7■■□□□ 1.38
CASC4-203ENST00000429162 LDHAL6AQ6ZMR3 332 aa23.7■■□□□ 1.38
CASC4-203ENST00000429162 XAGE2Q96GT9 111 aa23.7■■□□□ 1.38
CASC4-203ENST00000429162 ZSCAN31Q96LW9 406 aaPredicted RBP23.7■■□□□ 1.38
CASC4-203ENST00000429162 RIPOR2Q9Y4F9 1068 aa23.7■■□□□ 1.38
CASC4-203ENST00000429162 LAMB2P55268 1798 aa23.7■■□□□ 1.38
CASC4-203ENST00000429162 CAMTA2O94983 1202 aa23.69■■□□□ 1.38
CASC4-203ENST00000429162 CPA1P15085 419 aa23.69■■□□□ 1.38
CASC4-203ENST00000429162 KRT32Q14532 448 aa23.69■■□□□ 1.38
CASC4-203ENST00000429162 LRRFIP1Q32MZ4 808 aaKnown RBP23.69■■□□□ 1.38
CASC4-203ENST00000429162 TSGA10IPQ3SY00 556 aa23.69■■□□□ 1.38
CASC4-203ENST00000429162 CNNM1Q9NRU3 951 aa23.69■■□□□ 1.38
CASC4-203ENST00000429162 BRD1O95696 1058 aa23.69■■□□□ 1.38
CASC4-203ENST00000429162 ATP2B3Q16720 1220 aa23.69■■□□□ 1.38
CASC4-203ENST00000429162 FNBP4Q8N3X1 1017 aaPredicted RBP23.69■■□□□ 1.38
CASC4-203ENST00000429162 SH2B1Q9NRF2 756 aaPredicted RBP23.69■■□□□ 1.38
CASC4-203ENST00000429162 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.69■■□□□ 1.38
CASC4-203ENST00000429162 MYH14Q7Z406 1995 aaKnown RBP23.68■■□□□ 1.38
CASC4-203ENST00000429162 ADORA1P30542 326 aa23.68■■□□□ 1.38
CASC4-203ENST00000429162 SPATA31A6Q5VVP1 1343 aa23.68■■□□□ 1.38
CASC4-203ENST00000429162 KCNQ2O43526 872 aa23.67■■□□□ 1.38
CASC4-203ENST00000429162 ZMYM1Q5SVZ6 1142 aa23.67■■□□□ 1.38
CASC4-203ENST00000429162 MCTP1Q6DN14 999 aa23.67■■□□□ 1.38
CASC4-203ENST00000429162 BLOC1S2Q6QNY1 142 aa23.67■■□□□ 1.38
CASC4-203ENST00000429162 UTP14AQ9BVJ6 771 aaKnown RBP23.67■■□□□ 1.38
CASC4-203ENST00000429162 THSD7AQ9UPZ6 1657 aa23.67■■□□□ 1.38
CASC4-203ENST00000429162 HSP90B1P14625 803 aaKnown RBP23.67■■□□□ 1.38
CASC4-203ENST00000429162 GZF1Q9H116 711 aaPredicted RBP23.67■■□□□ 1.38
CASC4-203ENST00000429162 ANKRD1Q15327 319 aa23.66■■□□□ 1.38
CASC4-203ENST00000429162 SUSD4Q5VX71 490 aa23.66■■□□□ 1.38
CASC4-203ENST00000429162 CCDC129Q6ZRS4 1044 aa23.66■■□□□ 1.38
CASC4-203ENST00000429162 SEC62Q99442 399 aaKnown RBP23.66■■□□□ 1.38
CASC4-203ENST00000429162 ZNF652Q9Y2D9 606 aa23.66■■□□□ 1.38
CASC4-203ENST00000429162 DDX60Q8IY21 1712 aaKnown RBP23.66■■□□□ 1.38
CASC4-203ENST00000429162 RNF113AO15541 343 aaKnown RBP23.65■■□□□ 1.38
CASC4-203ENST00000429162 L1TD1Q5T7N2 865 aaKnown RBP23.65■■□□□ 1.38
CASC4-203ENST00000429162 ALDH8A1Q9H2A2 487 aaPredicted RBP23.65■■□□□ 1.38
CASC4-203ENST00000429162 RPS6KB1P23443 525 aa23.65■■□□□ 1.38
CASC4-203ENST00000429162 ARAP2Q8WZ64 1704 aa23.65■■□□□ 1.38
CASC4-203ENST00000429162 WDR33Q9C0J8 1336 aaKnown RBP23.65■■□□□ 1.38
CASC4-203ENST00000429162 CHGBP05060 677 aa23.64■■□□□ 1.37
CASC4-203ENST00000429162 VGLL2Q8N8G2 317 aa23.64■■□□□ 1.37
CASC4-203ENST00000429162 DSCC1Q9BVC3 393 aa23.64■■□□□ 1.37
CASC4-203ENST00000429162 FKBP4Q02790 459 aaKnown RBP eCLIP23.63■■□□□ 1.37
CASC4-203ENST00000429162 NHSQ6T4R5 1651 aa23.63■■□□□ 1.37
CASC4-203ENST00000429162 MROH5Q6ZUA9 1318 aa23.63■■□□□ 1.37
CASC4-203ENST00000429162 ZFYP08048 801 aaPredicted RBP23.63■■□□□ 1.37
CASC4-203ENST00000429162 KLHL40Q2TBA0 621 aa23.63■■□□□ 1.37
CASC4-203ENST00000429162 SMC3Q9UQE7 1217 aa23.63■■□□□ 1.37
CASC4-203ENST00000429162 RTL9Q8NET4 1388 aa23.62■■□□□ 1.37
CASC4-203ENST00000429162 ZNF512BQ96KM6 892 aaPredicted RBP23.62■■□□□ 1.37
CASC4-203ENST00000429162 USP21Q9UK80 565 aa23.62■■□□□ 1.37
CASC4-203ENST00000429162 NIP7Q9Y221 180 aaKnown RBP eCLIP23.62■■□□□ 1.37
CASC4-203ENST00000429162 MAST3O60307 1309 aa23.61■■□□□ 1.37
CASC4-203ENST00000429162 PDE8BO95263 885 aa23.61■■□□□ 1.37
CASC4-203ENST00000429162 LARGE1O95461 756 aa23.61■■□□□ 1.37
CASC4-203ENST00000429162 CERKQ8TCT0 537 aa23.61■■□□□ 1.37
CASC4-203ENST00000429162 SCN7AQ01118 1682 aa23.61■■□□□ 1.37
CASC4-203ENST00000429162 CNTNAP4Q9C0A0 1308 aa23.61■■□□□ 1.37
CASC4-203ENST00000429162 GOLGA6L3A6NEY3 463 aa23.61■■□□□ 1.37
CASC4-203ENST00000429162 NTSR2O95665 410 aa23.61■■□□□ 1.37
CASC4-203ENST00000429162 LINC00116Q8NCU8 138 aa23.61■■□□□ 1.37
CASC4-203ENST00000429162 LARP6Q9BRS8 491 aaKnown RBP23.61■■□□□ 1.37
CASC4-203ENST00000429162 LMBRD1Q9NUN5 540 aa23.61■■□□□ 1.37
CASC4-203ENST00000429162 TAF6LQ9Y6J9 622 aa23.61■■□□□ 1.37
CASC4-203ENST00000429162 DDX49Q9Y6V7 483 aaKnown RBP23.61■■□□□ 1.37
CASC4-203ENST00000429162 HCLS1P14317 486 aaPredicted RBP23.6■■□□□ 1.37
CASC4-203ENST00000429162 CCDC83Q8IWF9 413 aa23.6■■□□□ 1.37
CASC4-203ENST00000429162 ISY1Q9ULR0 285 aaKnown RBP23.6■■□□□ 1.37
CASC4-203ENST00000429162 PUM3Q15397 648 aaKnown RBP23.59■■□□□ 1.37
CASC4-203ENST00000429162 CCDC152Q4G0S7 254 aa23.59■■□□□ 1.37
CASC4-203ENST00000429162 FOXD4L5Q5VV16 416 aaPredicted RBP23.59■■□□□ 1.37
CASC4-203ENST00000429162 CLEC4GQ6UXB4 293 aa23.59■■□□□ 1.37
CASC4-203ENST00000429162 FOXD4L4Q8WXT5 416 aaPredicted RBP23.59■■□□□ 1.37
CASC4-203ENST00000429162 NEK1Q96PY6 1258 aa23.59■■□□□ 1.37
CASC4-203ENST00000429162 BTAF1O14981 1849 aa23.59■■□□□ 1.37
CASC4-203ENST00000429162 MYH7P12883 1935 aa23.59■■□□□ 1.37
CASC4-203ENST00000429162 FSD2A1L4K1 749 aa23.59■■□□□ 1.37
CASC4-203ENST00000429162 FAM177BA6PVY3 158 aa23.59■■□□□ 1.37
CASC4-203ENST00000429162 RGL2O15211 777 aa23.59■■□□□ 1.37
CASC4-203ENST00000429162 ZAP70P43403 619 aa23.59■■□□□ 1.37
CASC4-203ENST00000429162 SCARF1Q14162 830 aa23.59■■□□□ 1.37
CASC4-203ENST00000429162 CYP21A2P08686 494 aa23.58■■□□□ 1.37
CASC4-203ENST00000429162 ME3Q16798 604 aa23.58■■□□□ 1.37
CASC4-203ENST00000429162 TPCN1Q9ULQ1 816 aa23.58■■□□□ 1.37
CASC4-203ENST00000429162 LPIN2Q92539 896 aa23.57■■□□□ 1.36
CASC4-203ENST00000429162 M0R2C6 588 aa23.57■■□□□ 1.36
CASC4-203ENST00000429162 UQCRFS1P1P0C7P4 283 aa23.57■■□□□ 1.36
CASC4-203ENST00000429162 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.57■■□□□ 1.367e-14■■□□□ 14.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms