RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 FOXO4P98177 505 aa13.84□□□□□ -0.19
CECR3-201ENST00000428828 LMBR1LQ6UX01 489 aa13.84□□□□□ -0.19
CECR3-201ENST00000428828 ANKRD44Q8N8A2 993 aa13.84□□□□□ -0.19
CECR3-201ENST00000428828 PNMA6EA0A0J9YXQ4 647 aa13.83□□□□□ -0.2
CECR3-201ENST00000428828 PDE8AO60658 829 aa13.83□□□□□ -0.2
CECR3-201ENST00000428828 SASS6Q6UVJ0 657 aa13.83□□□□□ -0.2
CECR3-201ENST00000428828 C3orf67Q6ZVT6 689 aa13.83□□□□□ -0.2
CECR3-201ENST00000428828 SRGAP3O43295 1099 aa13.82□□□□□ -0.2
CECR3-201ENST00000428828 NASPP49321 788 aaPredicted RBP13.82□□□□□ -0.2
CECR3-201ENST00000428828 CTSWP56202 376 aa13.82□□□□□ -0.2
CECR3-201ENST00000428828 PPP4R3BQ5MIZ7 849 aa13.82□□□□□ -0.2
CECR3-201ENST00000428828 CLEC17AQ6ZS10 378 aa13.82□□□□□ -0.2
CECR3-201ENST00000428828 NAP1L2Q9ULW6 460 aaPredicted RBP13.82□□□□□ -0.2
CECR3-201ENST00000428828 KIF13BQ9NQT8 1826 aa13.82□□□□□ -0.2
CECR3-201ENST00000428828 SIRT2Q8IXJ6 389 aa13.82□□□□□ -0.2
CECR3-201ENST00000428828 SNX21Q969T3 373 aa13.82□□□□□ -0.2
CECR3-201ENST00000428828 PLA2G12BQ9BX93 195 aa13.82□□□□□ -0.2
CECR3-201ENST00000428828 R3HCC1Q9Y3T6 440 aaKnown RBP13.82□□□□□ -0.2
CECR3-201ENST00000428828 COL4A1P02462 1669 aa13.81□□□□□ -0.2
CECR3-201ENST00000428828 IGHDP01880 384 aa13.81□□□□□ -0.2
CECR3-201ENST00000428828 POLD1P28340 1107 aa13.81□□□□□ -0.2
CECR3-201ENST00000428828 SMC5Q8IY18 1101 aa13.81□□□□□ -0.2
CECR3-201ENST00000428828 PDLIM2Q96JY6 352 aa13.81□□□□□ -0.2
CECR3-201ENST00000428828 HSP90B1P14625 803 aaKnown RBP13.8□□□□□ -0.2
CECR3-201ENST00000428828 ATP8B2P98198 1209 aa13.8□□□□□ -0.2
CECR3-201ENST00000428828 RABL6Q3YEC7 729 aaPredicted RBP13.8□□□□□ -0.2
CECR3-201ENST00000428828 RPAP2Q8IXW5 612 aaPredicted RBP13.8□□□□□ -0.2
CECR3-201ENST00000428828 TTLL11Q8NHH1 800 aa13.8□□□□□ -0.2
CECR3-201ENST00000428828 NLRP3Q96P20 1036 aa13.8□□□□□ -0.2
CECR3-201ENST00000428828 GREM2Q9H772 168 aa13.8□□□□□ -0.2
CECR3-201ENST00000428828 DLEC1Q9Y238 1755 aa13.8□□□□□ -0.2
CECR3-201ENST00000428828 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
CECR3-201ENST00000428828 KLHDC4Q8TBB5 520 aa13.8□□□□□ -0.2
CECR3-201ENST00000428828 ZHX1Q9UKY1 873 aaPredicted RBP13.8□□□□□ -0.2
CECR3-201ENST00000428828 CCDC152Q4G0S7 254 aa13.79□□□□□ -0.2
CECR3-201ENST00000428828 SLC10A5Q5PT55 438 aa13.79□□□□□ -0.2
CECR3-201ENST00000428828 PA2G4Q9UQ80 394 aaKnown RBP13.79□□□□□ -0.2
CECR3-201ENST00000428828 A0A1B0GUL6 1792 aa13.79□□□□□ -0.2
CECR3-201ENST00000428828 RIC1Q4ADV7 1423 aa13.78□□□□□ -0.2
CECR3-201ENST00000428828 APBB1O00213 710 aa13.78□□□□□ -0.2
CECR3-201ENST00000428828 HMMRO75330 724 aa13.78□□□□□ -0.2
CECR3-201ENST00000428828 ITGA6P23229 1130 aa13.78□□□□□ -0.2
CECR3-201ENST00000428828 RBM25P49756 843 aaKnown RBP13.78□□□□□ -0.2
CECR3-201ENST00000428828 MTX1Q13505 466 aa13.78□□□□□ -0.2
CECR3-201ENST00000428828 RAB3GAP1Q15042 981 aa13.78□□□□□ -0.2
CECR3-201ENST00000428828 CCDC57Q2TAC2 916 aa13.78□□□□□ -0.2
CECR3-201ENST00000428828 ZNF594Q96JF6 807 aaPredicted RBP13.78□□□□□ -0.2
CECR3-201ENST00000428828 SIL1Q9H173 461 aa13.78□□□□□ -0.2
CECR3-201ENST00000428828 SEC31BQ9NQW1 1179 aa13.78□□□□□ -0.2
CECR3-201ENST00000428828 PPP1R1BQ9UD71 204 aaPredicted RBP13.78□□□□□ -0.2
CECR3-201ENST00000428828 C10orf71Q711Q0 1435 aa13.78□□□□□ -0.2
CECR3-201ENST00000428828 CSF1RP07333 972 aa13.78□□□□□ -0.2
CECR3-201ENST00000428828 ZNF445P59923 1031 aa13.78□□□□□ -0.2
CECR3-201ENST00000428828 IFIT5Q13325 482 aaKnown RBP13.78□□□□□ -0.2
CECR3-201ENST00000428828 HSCBQ8IWL3 235 aa13.78□□□□□ -0.2
CECR3-201ENST00000428828 RWDD1Q9H446 243 aaPredicted RBP13.78□□□□□ -0.2
CECR3-201ENST00000428828 KIAA1551Q9HCM1 1747 aa13.77□□□□□ -0.2
CECR3-201ENST00000428828 POLA2Q14181 598 aa13.77□□□□□ -0.21
CECR3-201ENST00000428828 SSH3Q8TE77 659 aa13.77□□□□□ -0.21
CECR3-201ENST00000428828 RPGRQ92834 1020 aaKnown RBP13.77□□□□□ -0.21
CECR3-201ENST00000428828 BRIP1Q9BX63 1249 aa13.77□□□□□ -0.21
CECR3-201ENST00000428828 EXOC6BQ9Y2D4 811 aa13.77□□□□□ -0.21
CECR3-201ENST00000428828 ZKSCAN5Q9Y2L8 839 aa13.77□□□□□ -0.21
CECR3-201ENST00000428828 ANKRD18BA2A2Z9 1011 aa13.76□□□□□ -0.21
CECR3-201ENST00000428828 PTGER2P43116 358 aa13.76□□□□□ -0.21
CECR3-201ENST00000428828 HDAC1Q13547 482 aaPredicted RBP13.76□□□□□ -0.21
CECR3-201ENST00000428828 KLHL40Q2TBA0 621 aa13.76□□□□□ -0.21
CECR3-201ENST00000428828 SPON1Q9HCB6 807 aa13.76□□□□□ -0.21
CECR3-201ENST00000428828 SURF6O75683 361 aaKnown RBP13.76□□□□□ -0.21
CECR3-201ENST00000428828 PDE6BP35913 854 aa13.76□□□□□ -0.21
CECR3-201ENST00000428828 RFX5P48382 616 aaPredicted RBP13.76□□□□□ -0.21
CECR3-201ENST00000428828 SF3B3Q15393 1217 aaKnown RBP13.76□□□□□ -0.21
CECR3-201ENST00000428828 SGIP1Q9BQI5 828 aa13.76□□□□□ -0.21
CECR3-201ENST00000428828 C22orf23Q9BZE7 217 aa13.76□□□□□ -0.21
CECR3-201ENST00000428828 TMEM51Q9NW97 253 aa13.76□□□□□ -0.21
CECR3-201ENST00000428828 LRP5O75197 1615 aa13.76□□□□□ -0.21
CECR3-201ENST00000428828 GTF2F1P35269 517 aaKnown RBP eCLIP13.75□□□□□ -0.21
CECR3-201ENST00000428828 OS9Q13438 667 aaPredicted RBP13.75□□□□□ -0.21
CECR3-201ENST00000428828 DDX46Q7L014 1031 aaKnown RBP13.75□□□□□ -0.21
CECR3-201ENST00000428828 TNPO1Q92973 898 aaKnown RBP13.75□□□□□ -0.21
CECR3-201ENST00000428828 BRCA1P38398 1863 aaKnown RBP13.75□□□□□ -0.21
CECR3-201ENST00000428828 CHRNA5P30532 468 aa13.74□□□□□ -0.21
CECR3-201ENST00000428828 PTPN12Q05209 780 aaKnown RBP13.74□□□□□ -0.21
CECR3-201ENST00000428828 C2CD5Q86YS7 1000 aa13.74□□□□□ -0.21
CECR3-201ENST00000428828 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.74□□□□□ -0.21
CECR3-201ENST00000428828 SLX4Q8IY92 1834 aa13.74□□□□□ -0.21
CECR3-201ENST00000428828 CRY2Q49AN0 593 aa13.74□□□□□ -0.21
CECR3-201ENST00000428828 CELF1Q92879 486 aaKnown RBP13.74□□□□□ -0.21
CECR3-201ENST00000428828 PRIMPOLQ96LW4 560 aa13.74□□□□□ -0.21
CECR3-201ENST00000428828 PUS3Q9BZE2 481 aaKnown RBP13.74□□□□□ -0.21
CECR3-201ENST00000428828 RTL9Q8NET4 1388 aa13.73□□□□□ -0.21
CECR3-201ENST00000428828 GOLGA6L22H0YM25 854 aa13.73□□□□□ -0.21
CECR3-201ENST00000428828 ANKRD18AQ8IVF6 992 aa13.73□□□□□ -0.21
CECR3-201ENST00000428828 MYRIPQ8NFW9 859 aa13.73□□□□□ -0.21
CECR3-201ENST00000428828 ZNF622Q969S3 477 aaKnown RBP eCLIP13.73□□□□□ -0.21
CECR3-201ENST00000428828 RBM17Q96I25 401 aaKnown RBP13.73□□□□□ -0.21
CECR3-201ENST00000428828 CDC5LQ99459 802 aaKnown RBP13.73□□□□□ -0.21
CECR3-201ENST00000428828 WWC3Q9ULE0 1092 aa13.73□□□□□ -0.21
CECR3-201ENST00000428828 H0YIN7 160 aa13.72□□□□□ -0.21
CECR3-201ENST00000428828 SRGNP10124 158 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms