RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 GPR25O00155 361 aa15.36■□□□□ 0.05
ALMS1P1-201ENST00000428767 EIF2S2P20042 333 aaKnown RBP15.36■□□□□ 0.05
ALMS1P1-201ENST00000428767 POLLQ9UGP5 575 aa15.36■□□□□ 0.05
ALMS1P1-201ENST00000428767 ERBB4Q15303 1308 aa15.36■□□□□ 0.05
ALMS1P1-201ENST00000428767 UBE2Q2LH0YL09 131 aa15.35■□□□□ 0.05
ALMS1P1-201ENST00000428767 GPSM2P81274 684 aa15.35■□□□□ 0.05
ALMS1P1-201ENST00000428767 SCARF1Q14162 830 aa15.35■□□□□ 0.05
ALMS1P1-201ENST00000428767 TMC4Q7Z404 712 aa15.35■□□□□ 0.05
ALMS1P1-201ENST00000428767 LRP10Q7Z4F1 713 aa15.35■□□□□ 0.05
ALMS1P1-201ENST00000428767 CELF1Q92879 486 aaKnown RBP15.35■□□□□ 0.05
ALMS1P1-201ENST00000428767 SH3TC1Q8TE82 1336 aa15.35■□□□□ 0.05
ALMS1P1-201ENST00000428767 CLSPNQ9HAW4 1339 aa15.35■□□□□ 0.05
ALMS1P1-201ENST00000428767 POTEFA5A3E0 1075 aa15.34■□□□□ 0.05
ALMS1P1-201ENST00000428767 FXR1P51114 621 aaKnown RBP eCLIP15.34■□□□□ 0.05
ALMS1P1-201ENST00000428767 AIMP1Q12904 312 aaKnown RBP15.34■□□□□ 0.05
ALMS1P1-201ENST00000428767 R3HDMLQ9H3Y0 253 aa15.34■□□□□ 0.05
ALMS1P1-201ENST00000428767 FKTNO75072 461 aa15.33■□□□□ 0.04
ALMS1P1-201ENST00000428767 FKBP1BP68106 108 aa15.33■□□□□ 0.04
ALMS1P1-201ENST00000428767 TTLL12Q14166 644 aaPredicted RBP15.33■□□□□ 0.04
ALMS1P1-201ENST00000428767 PDIA6Q15084 440 aa15.33■□□□□ 0.04
ALMS1P1-201ENST00000428767 PRAMEF18Q5VWM3 479 aa15.33■□□□□ 0.04
ALMS1P1-201ENST00000428767 NECTIN2Q92692 538 aa15.33■□□□□ 0.04
ALMS1P1-201ENST00000428767 EYA3Q99504 573 aa15.33■□□□□ 0.04
ALMS1P1-201ENST00000428767 SZT2Q5T011 3432 aa15.33■□□□□ 0.04
ALMS1P1-201ENST00000428767 VIL1P09327 827 aaKnown RBP15.32■□□□□ 0.04
ALMS1P1-201ENST00000428767 HSP90AB3PQ58FF7 597 aa15.32■□□□□ 0.04
ALMS1P1-201ENST00000428767 G3V3G9 751 aa15.31■□□□□ 0.04
ALMS1P1-201ENST00000428767 DCAF8Q5TAQ9 597 aa15.31■□□□□ 0.04
ALMS1P1-201ENST00000428767 COPS6Q7L5N1 327 aa15.31■□□□□ 0.04
ALMS1P1-201ENST00000428767 TBC1D16Q8TBP0 767 aa15.31■□□□□ 0.04
ALMS1P1-201ENST00000428767 XAGE3Q8WTP9 111 aa15.31■□□□□ 0.04
ALMS1P1-201ENST00000428767 PPP2R1AP30153 589 aa15.3■□□□□ 0.04
ALMS1P1-201ENST00000428767 TM4SF4P48230 202 aa15.3■□□□□ 0.04
ALMS1P1-201ENST00000428767 ZNF280AP59817 542 aaPredicted RBP15.3■□□□□ 0.04
ALMS1P1-201ENST00000428767 TCIRG1Q13488 830 aa15.3■□□□□ 0.04
ALMS1P1-201ENST00000428767 TRIOBPQ9H2D6 2365 aa15.3■□□□□ 0.04
ALMS1P1-201ENST00000428767 TSPYL4Q9UJ04 414 aa15.3■□□□□ 0.04
ALMS1P1-201ENST00000428767 TRIM17Q9Y577 477 aa15.3■□□□□ 0.04
ALMS1P1-201ENST00000428767 CEP290O15078 2479 aa15.29■□□□□ 0.04
ALMS1P1-201ENST00000428767 NEFMP07197 916 aa15.29■□□□□ 0.04
ALMS1P1-201ENST00000428767 NOM1Q5C9Z4 860 aaKnown RBP15.29■□□□□ 0.04
ALMS1P1-201ENST00000428767 RTL5Q5HYW3 569 aaPredicted RBP15.29■□□□□ 0.04
ALMS1P1-201ENST00000428767 RSBN1LQ6PCB5 846 aaPredicted RBP15.29■□□□□ 0.04
ALMS1P1-201ENST00000428767 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.29■□□□□ 0.04
ALMS1P1-201ENST00000428767 PITPNM2Q9BZ72 1349 aa15.28■□□□□ 0.04
ALMS1P1-201ENST00000428767 UFL1O94874 794 aa15.28■□□□□ 0.04
ALMS1P1-201ENST00000428767 SREBF2Q12772 1141 aa15.28■□□□□ 0.04
ALMS1P1-201ENST00000428767 FAM89AQ96GI7 184 aa15.28■□□□□ 0.04
ALMS1P1-201ENST00000428767 ZC3H12CQ9C0D7 883 aaKnown RBP15.28■□□□□ 0.04
ALMS1P1-201ENST00000428767 MYOZ2Q9NPC6 264 aa15.28■□□□□ 0.04
ALMS1P1-201ENST00000428767 ZNF646O15015 1829 aaPredicted RBP15.28■□□□□ 0.04
ALMS1P1-201ENST00000428767 SPEF2Q9C093 1822 aa15.28■□□□□ 0.04
ALMS1P1-201ENST00000428767 PRKG1Q13976 671 aa15.27■□□□□ 0.04
ALMS1P1-201ENST00000428767 NFE2L2Q16236 605 aa15.27■□□□□ 0.04
ALMS1P1-201ENST00000428767 AGBL3Q8NEM8 1001 aa15.27■□□□□ 0.04
ALMS1P1-201ENST00000428767 ZNF609O15014 1411 aa15.26■□□□□ 0.03
ALMS1P1-201ENST00000428767 USP17L8P0C7I0 530 aa15.26■□□□□ 0.03
ALMS1P1-201ENST00000428767 SF3B3Q15393 1217 aaKnown RBP15.26■□□□□ 0.03
ALMS1P1-201ENST00000428767 NBPF9Q3BBW0 867 aa15.26■□□□□ 0.03
ALMS1P1-201ENST00000428767 OTOP1Q7RTM1 612 aa15.26■□□□□ 0.03
ALMS1P1-201ENST00000428767 ANKIB1Q9P2G1 1089 aa15.26■□□□□ 0.03
ALMS1P1-201ENST00000428767 ATP5J2-PTCD1G3V325 749 aa15.25■□□□□ 0.03
ALMS1P1-201ENST00000428767 EN2P19622 333 aaPredicted RBP15.25■□□□□ 0.03
ALMS1P1-201ENST00000428767 PTPN12Q05209 780 aaKnown RBP15.25■□□□□ 0.03
ALMS1P1-201ENST00000428767 GMLQ99445 158 aa15.25■□□□□ 0.03
ALMS1P1-201ENST00000428767 GGA1Q9UJY5 639 aa15.25■□□□□ 0.03
ALMS1P1-201ENST00000428767 COLQQ9Y215 455 aaPredicted RBP15.25■□□□□ 0.03
ALMS1P1-201ENST00000428767 LAMB1P07942 1786 aa15.24■□□□□ 0.03
ALMS1P1-201ENST00000428767 NF2P35240 595 aa15.24■□□□□ 0.03
ALMS1P1-201ENST00000428767 RPS8P62241 208 aaKnown RBP15.24■□□□□ 0.03
ALMS1P1-201ENST00000428767 INTS3Q68E01 1043 aaKnown RBP15.24■□□□□ 0.03
ALMS1P1-201ENST00000428767 CFHR5Q9BXR6 569 aa15.24■□□□□ 0.03
ALMS1P1-201ENST00000428767 SEC31BQ9NQW1 1179 aa15.24■□□□□ 0.03
ALMS1P1-201ENST00000428767 PLEKHF1Q96S99 279 aa15.23■□□□□ 0.03
ALMS1P1-201ENST00000428767 PODXL2Q9NZ53 605 aa15.23■□□□□ 0.03
ALMS1P1-201ENST00000428767 FZD1Q9UP38 647 aa15.23■□□□□ 0.03
ALMS1P1-201ENST00000428767 MAPK8IP3Q9UPT6 1336 aa15.22■□□□□ 0.03
ALMS1P1-201ENST00000428767 SASH1O94885 1247 aa15.22■□□□□ 0.03
ALMS1P1-201ENST00000428767 ZEB1P37275 1124 aaPredicted RBP15.22■□□□□ 0.03
ALMS1P1-201ENST00000428767 CD99L2Q8TCZ2 262 aa15.22■□□□□ 0.03
ALMS1P1-201ENST00000428767 FBXW7Q969H0 707 aa15.22■□□□□ 0.03
ALMS1P1-201ENST00000428767 MXD3Q9BW11 206 aa15.22■□□□□ 0.03
ALMS1P1-201ENST00000428767 USP17L3A6NCW0 530 aa15.21■□□□□ 0.03
ALMS1P1-201ENST00000428767 USP17L4A6NCW7 530 aa15.21■□□□□ 0.03
ALMS1P1-201ENST00000428767 IRS4O14654 1257 aaPredicted RBP15.21■□□□□ 0.03
ALMS1P1-201ENST00000428767 KRT24Q2M2I5 525 aa15.21■□□□□ 0.03
ALMS1P1-201ENST00000428767 SPRYD7Q5W111 196 aa15.21■□□□□ 0.03
ALMS1P1-201ENST00000428767 USP17L1Q7RTZ2 530 aa15.21■□□□□ 0.03
ALMS1P1-201ENST00000428767 ARMC9Q7Z3E5 817 aa15.21■□□□□ 0.03
ALMS1P1-201ENST00000428767 ISCA1Q9BUE6 129 aa15.21■□□□□ 0.03
ALMS1P1-201ENST00000428767 CHPF2Q9P2E5 772 aa15.21■□□□□ 0.03
ALMS1P1-201ENST00000428767 ALDH1A1P00352 501 aa15.2■□□□□ 0.02
ALMS1P1-201ENST00000428767 ANGEL1Q9UNK9 670 aaKnown RBP15.2■□□□□ 0.02
ALMS1P1-201ENST00000428767 PTPN22Q9Y2R2 807 aa15.2■□□□□ 0.02
ALMS1P1-201ENST00000428767 RANBP2P49792 3224 aaKnown RBP15.2■□□□□ 0.02
ALMS1P1-201ENST00000428767 COL6A3P12111 3177 aa15.2■□□□□ 0.02
ALMS1P1-201ENST00000428767 IGF2BP3O00425 579 aaKnown RBP eCLIP15.19■□□□□ 0.02
ALMS1P1-201ENST00000428767 WNT10BO00744 389 aa15.19■□□□□ 0.02
ALMS1P1-201ENST00000428767 IFNL1Q8IU54 200 aa15.19■□□□□ 0.02
ALMS1P1-201ENST00000428767 PLBD2Q8NHP8 589 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms