RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 MRS2Q9HD23 443 aa19.99■□□□□ 0.79
SEC13-210ENST00000428626 THSD7BQ9C0I4 1608 aa19.98■□□□□ 0.79
SEC13-210ENST00000428626 CAPN15O75808 1086 aa19.98■□□□□ 0.79
SEC13-210ENST00000428626 CCDC152Q4G0S7 254 aa19.98■□□□□ 0.79
SEC13-210ENST00000428626 CYP4F22Q6NT55 531 aa19.98■□□□□ 0.79
SEC13-210ENST00000428626 SAMD7Q7Z3H4 446 aa19.98■□□□□ 0.79
SEC13-210ENST00000428626 TLL2Q9Y6L7 1015 aa19.98■□□□□ 0.79
SEC13-210ENST00000428626 IL16Q14005 1332 aa19.98■□□□□ 0.79
SEC13-210ENST00000428626 UFL1O94874 794 aa19.97■□□□□ 0.79
SEC13-210ENST00000428626 DPF2Q92785 391 aa19.97■□□□□ 0.79
SEC13-210ENST00000428626 CAPNS2Q96L46 248 aa19.97■□□□□ 0.79
SEC13-210ENST00000428626 FANCIQ9NVI1 1328 aa19.97■□□□□ 0.79
SEC13-210ENST00000428626 POLR2AP24928 1970 aaKnown RBP19.96■□□□□ 0.79
SEC13-210ENST00000428626 NEURL1BA8MQ27 555 aa19.96■□□□□ 0.79
SEC13-210ENST00000428626 CELF2O95319 508 aaKnown RBP19.96■□□□□ 0.79
SEC13-210ENST00000428626 SLC4A2P04920 1241 aa19.96■□□□□ 0.79
SEC13-210ENST00000428626 CTSWP56202 376 aa19.96■□□□□ 0.79
SEC13-210ENST00000428626 TTLL11Q8NHH1 800 aa19.96■□□□□ 0.79
SEC13-210ENST00000428626 ZC3H15Q8WU90 426 aaKnown RBP19.96■□□□□ 0.79
SEC13-210ENST00000428626 EYA3Q99504 573 aa19.96■□□□□ 0.79
SEC13-210ENST00000428626 STK31Q9BXU1 1019 aa19.96■□□□□ 0.79
SEC13-210ENST00000428626 SALL2Q9Y467 1007 aaPredicted RBP19.96■□□□□ 0.79
SEC13-210ENST00000428626 MYH3P11055 1940 aa19.96■□□□□ 0.79
SEC13-210ENST00000428626 ZNF316A6NFI3 1004 aaPredicted RBP19.95■□□□□ 0.78
SEC13-210ENST00000428626 H7C1D1 291 aa19.95■□□□□ 0.78
SEC13-210ENST00000428626 HSP90B1P14625 803 aaKnown RBP19.95■□□□□ 0.78
SEC13-210ENST00000428626 TBC1D10BQ4KMP7 808 aaPredicted RBP19.95■□□□□ 0.78
SEC13-210ENST00000428626 NCBP3Q53F19 620 aaKnown RBP19.95■□□□□ 0.78
SEC13-210ENST00000428626 SAPCD2Q86UD0 394 aa19.95■□□□□ 0.78
SEC13-210ENST00000428626 CHMP4AQ9BY43 222 aa19.95■□□□□ 0.78
SEC13-210ENST00000428626 SPINK5Q9NQ38 1064 aaPredicted RBP19.95■□□□□ 0.78
SEC13-210ENST00000428626 ANKIB1Q9P2G1 1089 aa19.95■□□□□ 0.78
SEC13-210ENST00000428626 SPEF2Q9C093 1822 aa19.95■□□□□ 0.78
SEC13-210ENST00000428626 CTCFP49711 727 aaPredicted RBP19.94■□□□□ 0.78
SEC13-210ENST00000428626 GRM1Q13255 1194 aa19.94■□□□□ 0.78
SEC13-210ENST00000428626 ANKRD18AQ8IVF6 992 aa19.94■□□□□ 0.78
SEC13-210ENST00000428626 ZC3H12CQ9C0D7 883 aaKnown RBP19.94■□□□□ 0.78
SEC13-210ENST00000428626 GREM2Q9H772 168 aa19.94■□□□□ 0.78
SEC13-210ENST00000428626 GGA1Q9UJY5 639 aa19.94■□□□□ 0.78
SEC13-210ENST00000428626 H7C1W4 665 aa19.93■□□□□ 0.78
SEC13-210ENST00000428626 VAMP4O75379 141 aa19.93■□□□□ 0.78
SEC13-210ENST00000428626 VIL1P09327 827 aaKnown RBP19.93■□□□□ 0.78
SEC13-210ENST00000428626 HSPA8P11142 646 aaKnown RBP19.93■□□□□ 0.78
SEC13-210ENST00000428626 LBX1P52954 281 aa19.93■□□□□ 0.78
SEC13-210ENST00000428626 PAXIP1Q6ZW49 1069 aaPredicted RBP19.93■□□□□ 0.78
SEC13-210ENST00000428626 USP48Q86UV5 1035 aa19.93■□□□□ 0.78
SEC13-210ENST00000428626 AIDAQ96BJ3 306 aa19.93■□□□□ 0.78
SEC13-210ENST00000428626 PRDM10Q9NQV6 1147 aa19.93■□□□□ 0.78
SEC13-210ENST00000428626 PSME4Q14997 1843 aa19.92■□□□□ 0.78
SEC13-210ENST00000428626 AOC2O75106 756 aa19.92■□□□□ 0.78
SEC13-210ENST00000428626 RPS12P25398 132 aaKnown RBP19.92■□□□□ 0.78
SEC13-210ENST00000428626 CASP7P55210 303 aa19.92■□□□□ 0.78
SEC13-210ENST00000428626 FLIIQ13045 1269 aa19.92■□□□□ 0.78
SEC13-210ENST00000428626 CDC37L1Q7L3B6 337 aa19.92■□□□□ 0.78
SEC13-210ENST00000428626 UBE3BQ7Z3V4 1068 aa19.92■□□□□ 0.78
SEC13-210ENST00000428626 ZNF408Q9H9D4 720 aa19.92■□□□□ 0.78
SEC13-210ENST00000428626 ASTN2O75129 1339 aaPredicted RBP19.92■□□□□ 0.78
SEC13-210ENST00000428626 XDHP47989 1333 aa19.92■□□□□ 0.78
SEC13-210ENST00000428626 ANP32CO43423 234 aa19.91■□□□□ 0.78
SEC13-210ENST00000428626 ZEB1P37275 1124 aaPredicted RBP19.91■□□□□ 0.78
SEC13-210ENST00000428626 NEXNQ0ZGT2 675 aa19.91■□□□□ 0.78
SEC13-210ENST00000428626 RBM26Q5T8P6 1007 aaKnown RBP19.91■□□□□ 0.78
SEC13-210ENST00000428626 MINPP1Q9UNW1 487 aa19.91■□□□□ 0.78
SEC13-210ENST00000428626 ECE1P42892 770 aa19.9■□□□□ 0.78
SEC13-210ENST00000428626 MAP2K1Q02750 393 aaPredicted RBP19.9■□□□□ 0.78
SEC13-210ENST00000428626 EXOSC9Q06265 439 aaKnown RBP19.9■□□□□ 0.78
SEC13-210ENST00000428626 GCKRQ14397 625 aa19.9■□□□□ 0.78
SEC13-210ENST00000428626 ADM5C9JUS6 153 aa19.89■□□□□ 0.77
SEC13-210ENST00000428626 ZNF646O15015 1829 aaPredicted RBP19.89■□□□□ 0.77
SEC13-210ENST00000428626 CACNA1FO60840 1977 aa19.89■□□□□ 0.77
SEC13-210ENST00000428626 WDR63Q8IWG1 891 aa19.89■□□□□ 0.77
SEC13-210ENST00000428626 GMLQ99445 158 aa19.89■□□□□ 0.77
SEC13-210ENST00000428626 CDC5LQ99459 802 aaKnown RBP19.89■□□□□ 0.77
SEC13-210ENST00000428626 BSDC1Q9NW68 430 aaPredicted RBP19.89■□□□□ 0.77
SEC13-210ENST00000428626 ZNF609O15014 1411 aa19.88■□□□□ 0.77
SEC13-210ENST00000428626 ATP2B4P23634 1241 aa19.88■□□□□ 0.77
SEC13-210ENST00000428626 FKBP5Q13451 457 aaPredicted RBP19.88■□□□□ 0.77
SEC13-210ENST00000428626 KIF4BQ2VIQ3 1234 aa19.88■□□□□ 0.77
SEC13-210ENST00000428626 DNAAF4Q8WXU2 420 aa19.88■□□□□ 0.77
SEC13-210ENST00000428626 ZIC5Q96T25 663 aa19.88■□□□□ 0.77
SEC13-210ENST00000428626 PLA2G12BQ9BX93 195 aa19.88■□□□□ 0.77
SEC13-210ENST00000428626 RSBN1LQ6PCB5 846 aaPredicted RBP19.87■□□□□ 0.77
SEC13-210ENST00000428626 KRT26Q7Z3Y9 468 aa19.87■□□□□ 0.77
SEC13-210ENST00000428626 TXNRD3Q86VQ6 643 aa19.87■□□□□ 0.77
SEC13-210ENST00000428626 HHIPL1Q96JK4 782 aa19.87■□□□□ 0.77
SEC13-210ENST00000428626 F6X3S4 739 aa19.86■□□□□ 0.77
SEC13-210ENST00000428626 G3V3G9 751 aa19.86■□□□□ 0.77
SEC13-210ENST00000428626 ZNF280AP59817 542 aaPredicted RBP19.86■□□□□ 0.77
SEC13-210ENST00000428626 FAM161AQ3B820 660 aa19.86■□□□□ 0.77
SEC13-210ENST00000428626 DCAF8Q5TAQ9 597 aa19.86■□□□□ 0.77
SEC13-210ENST00000428626 MXD3Q9BW11 206 aa19.86■□□□□ 0.77
SEC13-210ENST00000428626 TSKSQ9UJT2 592 aa19.86■□□□□ 0.77
SEC13-210ENST00000428626 MED23Q9ULK4 1368 aa19.85■□□□□ 0.77
SEC13-210ENST00000428626 CSF1RP07333 972 aa19.85■□□□□ 0.77
SEC13-210ENST00000428626 KLRK1P26718 216 aa19.85■□□□□ 0.77
SEC13-210ENST00000428626 MAP2K2P36507 400 aa19.85■□□□□ 0.77
SEC13-210ENST00000428626 CCT4P50991 539 aaKnown RBP19.85■□□□□ 0.77
SEC13-210ENST00000428626 AGBL3Q8NEM8 1001 aa19.85■□□□□ 0.77
SEC13-210ENST00000428626 LINS1Q8NG48 757 aa19.85■□□□□ 0.77
SEC13-210ENST00000428626 GGA3Q9NZ52 723 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms