RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 XAGE3Q8WTP9 111 aa10.23□□□□□ -0.77
CTNND1-208ENST00000428599 URI1O94763 535 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-208ENST00000428599 KIAA0753Q2KHM9 967 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 MTHFSDQ2M296 383 aaKnown RBP10.22□□□□□ -0.77
CTNND1-208ENST00000428599 CCDC183Q5T5S1 534 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 KIF18AQ8NI77 898 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 SMARCC1Q92922 1105 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-208ENST00000428599 BIN2Q9UBW5 565 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-208ENST00000428599 NBPF14Q5TI25 921 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 CFAP57Q96MR6 1250 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 IQCGQ9H095 443 aaKnown RBP10.22□□□□□ -0.77
CTNND1-208ENST00000428599 MMRN2Q9H8L6 949 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 RMND1Q9NWS8 449 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 TARBP1Q13395 1621 aaKnown RBP10.22□□□□□ -0.77
CTNND1-208ENST00000428599 ZFYVE16Q7Z3T8 1539 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 GOLIM4O00461 696 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 NBPF7P0C2Y1 421 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-208ENST00000428599 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 EVI5LQ96CN4 794 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 TESK2Q96S53 571 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 PZPP20742 1482 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 KAT6BQ8WYB5 2073 aa10.22□□□□□ -0.77
CTNND1-208ENST00000428599 COPS6Q7L5N1 327 aa10.21□□□□□ -0.77
CTNND1-208ENST00000428599 RFX1P22670 979 aa10.21□□□□□ -0.77
CTNND1-208ENST00000428599 RNF187Q5TA31 235 aaPredicted RBP10.21□□□□□ -0.77
CTNND1-208ENST00000428599 NEO1Q92859 1461 aa10.21□□□□□ -0.77
CTNND1-208ENST00000428599 METAP2P50579 478 aaKnown RBP eCLIP10.21□□□□□ -0.77
CTNND1-208ENST00000428599 APBB1IPQ7Z5R6 666 aaPredicted RBP10.21□□□□□ -0.77
CTNND1-208ENST00000428599 BTG4Q9NY30 223 aa10.21□□□□□ -0.77
CTNND1-208ENST00000428599 LMOD1P29536 600 aaPredicted RBP10.21□□□□□ -0.78
CTNND1-208ENST00000428599 PLS1Q14651 629 aa10.21□□□□□ -0.78
CTNND1-208ENST00000428599 NFATC2IPQ8NCF5 419 aa10.21□□□□□ -0.78
CTNND1-208ENST00000428599 NCOA7Q8NI08 942 aa10.21□□□□□ -0.78
CTNND1-208ENST00000428599 CLIP2Q9UDT6 1046 aa10.21□□□□□ -0.78
CTNND1-208ENST00000428599 CFAP65Q6ZU64 1925 aaKnown RBP10.21□□□□□ -0.78
CTNND1-208ENST00000428599 HOXC9P31274 260 aa10.21□□□□□ -0.78
CTNND1-208ENST00000428599 SETDB2Q96T68 719 aa10.21□□□□□ -0.78
CTNND1-208ENST00000428599 ARHGEF12Q9NZN5 1544 aa10.21□□□□□ -0.78
CTNND1-208ENST00000428599 ZWINTO95229 277 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 MAATS1Q7Z4T9 603 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 FSIP1Q8NA03 581 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 EHBP1Q8NDI1 1231 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 SMARCC2Q8TAQ2 1214 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 USP16Q9Y5T5 823 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 A0A1W2PRG0 241 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 SYCE3A1L190 88 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 CCT2P78371 535 aaKnown RBP10.2□□□□□ -0.78
CTNND1-208ENST00000428599 BMS1Q14692 1282 aaKnown RBP10.2□□□□□ -0.78
CTNND1-208ENST00000428599 CCDC155Q8N6L0 562 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 EYA1Q99502 592 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 PRPHP41219 470 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 ZNF804AQ7Z570 1209 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 CEP112Q8N8E3 955 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 MSANTD4Q8NCY6 345 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 JDP2Q8WYK2 163 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 ORAI2Q96SN7 254 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 ZMYND15Q9H091 742 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 ADGRL2O95490 1459 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 SLC4A8Q2Y0W8 1093 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 TCHPQ9BT92 498 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 SNRKQ9NRH2 765 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 NEMFO60524 1076 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 CKAP4Q07065 602 aaKnown RBP10.2□□□□□ -0.78
CTNND1-208ENST00000428599 CCDC144CPQ8IYA2 1237 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 KIAA1524Q8TCG1 905 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 LIMCH1Q9UPQ0 1083 aa10.2□□□□□ -0.78
CTNND1-208ENST00000428599 GOLGA6L9A6NEM1 432 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 SNX16P57768 344 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 CARD14Q9BXL6 1004 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 KRT23Q9C075 422 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 FAM107BQ9H098 131 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 ECHDC1Q9NTX5 307 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 STX8Q9UNK0 236 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 ZFYVE9O95405 1425 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 MAP3K19Q56UN5 1328 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 ERICH4A6NGS2 130 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 GSDMDP57764 484 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 IP6K1Q92551 441 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 SIRT1Q96EB6 747 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 TRIM47Q96LD4 638 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 SLC26A6Q9BXS9 759 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 C6orf50Q9HD87 102 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 RASAL2Q9UJF2 1139 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 CFAP74Q9C0B2 1584 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 SH3BP5O60239 455 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 BMP15O95972 392 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 DDX19AQ9NUU7 478 aaKnown RBP10.19□□□□□ -0.78
CTNND1-208ENST00000428599 POLR3AO14802 1390 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-208ENST00000428599 MAP3K5Q99683 1374 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 GNAQP50148 359 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 C8orf58Q8NAV2 365 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.19□□□□□ -0.784e-9■□□□□ 9.9
CTNND1-208ENST00000428599 MRVI1Q9Y6F6 885 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 STX1AQ16623 288 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 SPAG5Q96R06 1193 aa10.19□□□□□ -0.78
CTNND1-208ENST00000428599 NIP7Q9Y221 180 aaKnown RBP eCLIP10.19□□□□□ -0.78
CTNND1-208ENST00000428599 SKAP1Q86WV1 359 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 VEZTQ9HBM0 779 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 ODF2LQ9ULJ1 636 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 PARP3Q9Y6F1 533 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms