RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 XDHP47989 1333 aa29.32■■■□□ 2.28
GLI3-202ENST00000428534 ANKRD44Q8N8A2 993 aa29.32■■■□□ 2.28
GLI3-202ENST00000428534 JDP2Q8WYK2 163 aa29.32■■■□□ 2.28
GLI3-202ENST00000428534 WDR90Q96KV7 1748 aa29.31■■■□□ 2.28
GLI3-202ENST00000428534 APLP1P51693 650 aa29.31■■■□□ 2.28
GLI3-202ENST00000428534 ZNF277Q9NRM2 450 aaPredicted RBP29.31■■■□□ 2.28
GLI3-202ENST00000428534 MINPP1Q9UNW1 487 aa29.31■■■□□ 2.28
GLI3-202ENST00000428534 LRRFIP2Q9Y608 721 aaKnown RBP29.31■■■□□ 2.28
GLI3-202ENST00000428534 LRRC37AA6NMS7 1700 aa29.31■■■□□ 2.28
GLI3-202ENST00000428534 RLBP1P12271 317 aa29.3■■■□□ 2.28
GLI3-202ENST00000428534 GPSM2P81274 684 aa29.3■■■□□ 2.28
GLI3-202ENST00000428534 LDHAL6AQ6ZMR3 332 aa29.3■■■□□ 2.28
GLI3-202ENST00000428534 GGA1Q9UJY5 639 aa29.3■■■□□ 2.28
GLI3-202ENST00000428534 DDX19BQ9UMR2 479 aa29.3■■■□□ 2.28
GLI3-202ENST00000428534 TAF1P21675 1872 aa29.29■■■□□ 2.28
GLI3-202ENST00000428534 ATP2B4P23634 1241 aa29.29■■■□□ 2.28
GLI3-202ENST00000428534 IFFO2Q5TF58 517 aa29.29■■■□□ 2.28
GLI3-202ENST00000428534 CNNM1Q9NRU3 951 aa29.29■■■□□ 2.28
GLI3-202ENST00000428534 TIAM2Q8IVF5 1701 aa29.28■■■□□ 2.28
GLI3-202ENST00000428534 C6orf229H3BNL8 230 aa29.28■■■□□ 2.28
GLI3-202ENST00000428534 ZBTB7BO15156 539 aaPredicted RBP29.28■■■□□ 2.28
GLI3-202ENST00000428534 MVPQ14764 893 aaKnown RBP29.28■■■□□ 2.28
GLI3-202ENST00000428534 LARGE2Q8N3Y3 721 aa29.28■■■□□ 2.28
GLI3-202ENST00000428534 PANK1Q8TE04 598 aa29.28■■■□□ 2.28
GLI3-202ENST00000428534 KDM2BQ8NHM5 1336 aa29.27■■■□□ 2.28
GLI3-202ENST00000428534 PPIP5K2O43314 1243 aa29.27■■■□□ 2.28
GLI3-202ENST00000428534 PLIN1O60240 522 aa29.27■■■□□ 2.28
GLI3-202ENST00000428534 PRELPP51888 382 aa29.27■■■□□ 2.28
GLI3-202ENST00000428534 WASHC4Q2M389 1173 aa29.27■■■□□ 2.28
GLI3-202ENST00000428534 DPY19L2Q6NUT2 758 aa29.27■■■□□ 2.28
GLI3-202ENST00000428534 RBM46Q8TBY0 533 aaKnown RBP29.27■■■□□ 2.28
GLI3-202ENST00000428534 FBXO3Q9UK99 471 aa29.27■■■□□ 2.28
GLI3-202ENST00000428534 LEMD3Q9Y2U8 911 aa29.27■■■□□ 2.28
GLI3-202ENST00000428534 KIAA2012Q0VF49 1180 aa29.26■■■□□ 2.27
GLI3-202ENST00000428534 TBC1D16Q8TBP0 767 aa29.26■■■□□ 2.27
GLI3-202ENST00000428534 MTX1Q13505 466 aa29.25■■■□□ 2.27
GLI3-202ENST00000428534 NIM1KQ8IY84 436 aa29.25■■■□□ 2.27
GLI3-202ENST00000428534 C16orf71Q8IYS4 520 aaPredicted RBP29.25■■■□□ 2.27
GLI3-202ENST00000428534 ZC3H12CQ9C0D7 883 aaKnown RBP29.25■■■□□ 2.27
GLI3-202ENST00000428534 UFL1O94874 794 aa29.24■■■□□ 2.27
GLI3-202ENST00000428534 DNAJC5GQ8N7S2 189 aa29.24■■■□□ 2.27
GLI3-202ENST00000428534 RRAGCQ9HB90 399 aa29.24■■■□□ 2.27
GLI3-202ENST00000428534 MROH5Q6ZUA9 1318 aa29.23■■■□□ 2.27
GLI3-202ENST00000428534 CHRNDQ07001 517 aa29.23■■■□□ 2.27
GLI3-202ENST00000428534 ZNF594Q96JF6 807 aaPredicted RBP29.23■■■□□ 2.27
GLI3-202ENST00000428534 POLLQ9UGP5 575 aa29.23■■■□□ 2.27
GLI3-202ENST00000428534 COL4A1P02462 1669 aa29.22■■■□□ 2.27
GLI3-202ENST00000428534 KCNJ4P48050 445 aa29.22■■■□□ 2.27
GLI3-202ENST00000428534 AOC3Q16853 763 aa29.22■■■□□ 2.27
GLI3-202ENST00000428534 DICER1Q9UPY3 1922 aaKnown RBP29.22■■■□□ 2.27
GLI3-202ENST00000428534 RRP1P56182 461 aaKnown RBP29.21■■■□□ 2.27
GLI3-202ENST00000428534 EIF6P56537 245 aaKnown RBP29.21■■■□□ 2.27
GLI3-202ENST00000428534 COG6Q9Y2V7 657 aa29.21■■■□□ 2.27
GLI3-202ENST00000428534 G3V3G9 751 aa29.2■■■□□ 2.26
GLI3-202ENST00000428534 SRGAP3O43295 1099 aa29.2■■■□□ 2.26
GLI3-202ENST00000428534 DCAF8Q5TAQ9 597 aa29.2■■■□□ 2.26
GLI3-202ENST00000428534 SLC51AQ86UW1 340 aa29.2■■■□□ 2.26
GLI3-202ENST00000428534 GLTPD2A6NH11 291 aa29.19■■■□□ 2.26
GLI3-202ENST00000428534 FZD9O00144 591 aa29.19■■■□□ 2.26
GLI3-202ENST00000428534 RFX5P48382 616 aaPredicted RBP29.19■■■□□ 2.26
GLI3-202ENST00000428534 HTRA3P83110 453 aa29.19■■■□□ 2.26
GLI3-202ENST00000428534 PTPN12Q05209 780 aaKnown RBP29.19■■■□□ 2.26
GLI3-202ENST00000428534 ZNRF3Q9ULT6 936 aa29.19■■■□□ 2.26
GLI3-202ENST00000428534 RIPOR2Q9Y4F9 1068 aa29.19■■■□□ 2.26
GLI3-202ENST00000428534 ZNF804BA4D1E1 1349 aa29.19■■■□□ 2.26
GLI3-202ENST00000428534 PCNTO95613 3336 aa29.18■■■□□ 2.26
GLI3-202ENST00000428534 COPRSQ9NQ92 184 aa29.18■■■□□ 2.26
GLI3-202ENST00000428534 EYA2O00167 538 aa29.17■■■□□ 2.26
GLI3-202ENST00000428534 CIAO1O76071 339 aa29.17■■■□□ 2.26
GLI3-202ENST00000428534 FSTL1Q12841 308 aa29.17■■■□□ 2.26
GLI3-202ENST00000428534 DUOX1Q9NRD9 1551 aa29.17■■■□□ 2.26
GLI3-202ENST00000428534 MED23Q9ULK4 1368 aa29.16■■■□□ 2.26
GLI3-202ENST00000428534 RIMBP2O15034 1052 aa29.16■■■□□ 2.26
GLI3-202ENST00000428534 ATP8B2P98198 1209 aa29.16■■■□□ 2.26
GLI3-202ENST00000428534 UBE4AQ14139 1066 aa29.16■■■□□ 2.26
GLI3-202ENST00000428534 LTBP1Q14766 1721 aa29.16■■■□□ 2.26
GLI3-202ENST00000428534 SPEF2Q9C093 1822 aa29.15■■■□□ 2.26
GLI3-202ENST00000428534 METTL24Q5JXM2 366 aa29.15■■■□□ 2.26
GLI3-202ENST00000428534 IL15P40933 162 aaPredicted RBP29.14■■■□□ 2.26
GLI3-202ENST00000428534 PUS3Q9BZE2 481 aaKnown RBP29.14■■■□□ 2.26
GLI3-202ENST00000428534 LRRC24Q50LG9 513 aa29.13■■■□□ 2.25
GLI3-202ENST00000428534 C15orf52Q6ZUT6 534 aaKnown RBP29.13■■■□□ 2.25
GLI3-202ENST00000428534 ZBTB40Q9NUA8 1239 aa29.13■■■□□ 2.25
GLI3-202ENST00000428534 TAF5LO75529 589 aa29.12■■■□□ 2.25
GLI3-202ENST00000428534 PDE8BO95263 885 aa29.12■■■□□ 2.25
GLI3-202ENST00000428534 TNIP1Q15025 636 aa29.12■■■□□ 2.25
GLI3-202ENST00000428534 C20orf194Q5TEA3 1177 aa29.12■■■□□ 2.25
GLI3-202ENST00000428534 PODNQ7Z5L7 613 aa29.12■■■□□ 2.25
GLI3-202ENST00000428534 RPAP2Q8IXW5 612 aaPredicted RBP29.12■■■□□ 2.25
GLI3-202ENST00000428534 GPC2Q8N158 579 aa29.12■■■□□ 2.25
GLI3-202ENST00000428534 HELBQ8NG08 1087 aaPredicted RBP29.12■■■□□ 2.25
GLI3-202ENST00000428534 KLHDC4Q8TBB5 520 aa29.12■■■□□ 2.25
GLI3-202ENST00000428534 COA1Q9GZY4 146 aa29.11■■■□□ 2.25
GLI3-202ENST00000428534 ECE2O60344 883 aa29.1■■■□□ 2.25
GLI3-202ENST00000428534 SSH3Q8TE77 659 aa29.1■■■□□ 2.25
GLI3-202ENST00000428534 C1orf115Q9H7X2 142 aa29.1■■■□□ 2.25
GLI3-202ENST00000428534 CEP126Q9P2H0 1117 aa29.1■■■□□ 2.25
GLI3-202ENST00000428534 HMMRO75330 724 aa29.09■■■□□ 2.25
GLI3-202ENST00000428534 G3BP1Q13283 466 aaKnown RBP eCLIP29.09■■■□□ 2.25
GLI3-202ENST00000428534 POLA2Q14181 598 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms