RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 BBOX1O75936 387 aa15.4■□□□□ 0.06
TRIM39-207ENST00000428404 PLEKHM2Q8IWE5 1019 aa15.4■□□□□ 0.06
TRIM39-207ENST00000428404 CLASRPQ8N2M8 674 aaKnown RBP15.4■□□□□ 0.06
TRIM39-207ENST00000428404 MASTLQ96GX5 879 aa15.4■□□□□ 0.06
TRIM39-207ENST00000428404 MINPP1Q9UNW1 487 aa15.4■□□□□ 0.06
TRIM39-207ENST00000428404 H0YIN7 160 aa15.39■□□□□ 0.05
TRIM39-207ENST00000428404 PDE8BO95263 885 aa15.39■□□□□ 0.05
TRIM39-207ENST00000428404 TNNI3KQ59H18 835 aa15.39■□□□□ 0.05
TRIM39-207ENST00000428404 METTL24Q5JXM2 366 aa15.39■□□□□ 0.05
TRIM39-207ENST00000428404 STYK1Q6J9G0 422 aa15.39■□□□□ 0.05
TRIM39-207ENST00000428404 C2CD5Q86YS7 1000 aa15.39■□□□□ 0.05
TRIM39-207ENST00000428404 STAP2Q9UGK3 403 aa15.39■□□□□ 0.05
TRIM39-207ENST00000428404 FPGT-TNNI3KV9GXZ4 949 aa15.39■□□□□ 0.05
TRIM39-207ENST00000428404 ALDH1B1P30837 517 aa15.38■□□□□ 0.05
TRIM39-207ENST00000428404 RGS3P49796 1198 aa15.38■□□□□ 0.05
TRIM39-207ENST00000428404 CHRNDQ07001 517 aa15.38■□□□□ 0.05
TRIM39-207ENST00000428404 OSBPL3Q9H4L5 887 aa15.38■□□□□ 0.05
TRIM39-207ENST00000428404 TAF1P21675 1872 aa15.37■□□□□ 0.05
TRIM39-207ENST00000428404 FGFR2P21802 821 aa15.37■□□□□ 0.05
TRIM39-207ENST00000428404 PDE1AP54750 535 aa15.37■□□□□ 0.05
TRIM39-207ENST00000428404 TMC4Q7Z404 712 aa15.37■□□□□ 0.05
TRIM39-207ENST00000428404 AACSQ86V21 672 aa15.37■□□□□ 0.05
TRIM39-207ENST00000428404 AKAP2Q9Y2D5 859 aa15.37■□□□□ 0.05
TRIM39-207ENST00000428404 IFIT2P09913 472 aaKnown RBP15.36■□□□□ 0.05
TRIM39-207ENST00000428404 KCNA3P22001 575 aa15.36■□□□□ 0.05
TRIM39-207ENST00000428404 CHRNA5P30532 468 aa15.36■□□□□ 0.05
TRIM39-207ENST00000428404 TIMM10P62072 90 aa15.36■□□□□ 0.05
TRIM39-207ENST00000428404 HELBQ8NG08 1087 aaPredicted RBP15.36■□□□□ 0.05
TRIM39-207ENST00000428404 CCDC8Q9H0W5 538 aaPredicted RBP15.36■□□□□ 0.05
TRIM39-207ENST00000428404 SPON1Q9HCB6 807 aa15.36■□□□□ 0.05
TRIM39-207ENST00000428404 DBNLQ9UJU6 430 aaKnown RBP15.36■□□□□ 0.05
TRIM39-207ENST00000428404 CD2APQ9Y5K6 639 aa15.36■□□□□ 0.05
TRIM39-207ENST00000428404 A0A1B0GUL7 405 aa15.35■□□□□ 0.05
TRIM39-207ENST00000428404 SOCS7O14512 581 aa15.35■□□□□ 0.05
TRIM39-207ENST00000428404 TAF5LO75529 589 aa15.35■□□□□ 0.05
TRIM39-207ENST00000428404 MX1P20591 662 aa15.35■□□□□ 0.05
TRIM39-207ENST00000428404 TGFB2P61812 414 aa15.35■□□□□ 0.05
TRIM39-207ENST00000428404 PUM3Q15397 648 aaKnown RBP15.35■□□□□ 0.05
TRIM39-207ENST00000428404 ATP2B3Q16720 1220 aa15.35■□□□□ 0.05
TRIM39-207ENST00000428404 SP8Q8IXZ3 490 aa15.35■□□□□ 0.05
TRIM39-207ENST00000428404 ANKRD2Q9GZV1 360 aa15.35■□□□□ 0.05
TRIM39-207ENST00000428404 TLR7Q9NYK1 1049 aaKnown RBP15.35■□□□□ 0.05
TRIM39-207ENST00000428404 KIF13BQ9NQT8 1826 aa15.35■□□□□ 0.05
TRIM39-207ENST00000428404 AOX1Q06278 1338 aa15.35■□□□□ 0.05
TRIM39-207ENST00000428404 ZNF609O15014 1411 aa15.34■□□□□ 0.05
TRIM39-207ENST00000428404 COL11A2P13942 1736 aaPredicted RBP15.34■□□□□ 0.05
TRIM39-207ENST00000428404 UBE4AQ14139 1066 aa15.34■□□□□ 0.05
TRIM39-207ENST00000428404 LPIN2Q92539 896 aa15.34■□□□□ 0.05
TRIM39-207ENST00000428404 CNKSR1Q969H4 720 aa15.34■□□□□ 0.05
TRIM39-207ENST00000428404 ZNF622Q969S3 477 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRIM39-207ENST00000428404 BCL11AQ9H165 835 aa15.34■□□□□ 0.05
TRIM39-207ENST00000428404 ATP6V0A2Q9Y487 856 aa15.34■□□□□ 0.05
TRIM39-207ENST00000428404 TTC41PQ6P2S7 1318 aa15.34■□□□□ 0.05
TRIM39-207ENST00000428404 A0A0G2JLW4 131 aa15.33■□□□□ 0.04
TRIM39-207ENST00000428404 SNAP23O00161 211 aa15.33■□□□□ 0.04
TRIM39-207ENST00000428404 PPEF1O14829 653 aaPredicted RBP15.33■□□□□ 0.04
TRIM39-207ENST00000428404 DPEP1P16444 411 aa15.33■□□□□ 0.04
TRIM39-207ENST00000428404 SLC51AQ86UW1 340 aa15.33■□□□□ 0.04
TRIM39-207ENST00000428404 PI4K2BQ8TCG2 481 aa15.33■□□□□ 0.04
TRIM39-207ENST00000428404 C7orf43Q8WVR3 580 aa15.33■□□□□ 0.04
TRIM39-207ENST00000428404 DBNDD2Q9BQY9 259 aa15.33■□□□□ 0.04
TRIM39-207ENST00000428404 ECHDC1Q9NTX5 307 aa15.33■□□□□ 0.04
TRIM39-207ENST00000428404 PODXL2Q9NZ53 605 aa15.33■□□□□ 0.04
TRIM39-207ENST00000428404 WTIPA6NIX2 430 aaPredicted RBP15.32■□□□□ 0.04
TRIM39-207ENST00000428404 ADORA1P30542 326 aa15.32■□□□□ 0.04
TRIM39-207ENST00000428404 PRPF40BQ6NWY9 871 aaKnown RBP15.32■□□□□ 0.04
TRIM39-207ENST00000428404 XAGE2Q96GT9 111 aa15.32■□□□□ 0.04
TRIM39-207ENST00000428404 NEUROD6Q96NK8 337 aa15.32■□□□□ 0.04
TRIM39-207ENST00000428404 SPEF2Q9C093 1822 aa15.31■□□□□ 0.04
TRIM39-207ENST00000428404 SLC5A1P13866 664 aa15.31■□□□□ 0.04
TRIM39-207ENST00000428404 ATP5JP18859 108 aa15.31■□□□□ 0.04
TRIM39-207ENST00000428404 GPSM2P81274 684 aa15.31■□□□□ 0.04
TRIM39-207ENST00000428404 BMP2KLQ5H9B9 411 aa15.31■□□□□ 0.04
TRIM39-207ENST00000428404 TTC22Q5TAA0 569 aa15.31■□□□□ 0.04
TRIM39-207ENST00000428404 TSHZ3Q63HK5 1081 aa15.31■□□□□ 0.04
TRIM39-207ENST00000428404 GPATCH3Q96I76 525 aa15.31■□□□□ 0.04
TRIM39-207ENST00000428404 LEMD3Q9Y2U8 911 aa15.31■□□□□ 0.04
TRIM39-207ENST00000428404 XDHP47989 1333 aa15.31■□□□□ 0.04
TRIM39-207ENST00000428404 IRS2Q9Y4H2 1338 aa15.31■□□□□ 0.04
TRIM39-207ENST00000428404 GLRX3O76003 335 aaKnown RBP15.3■□□□□ 0.04
TRIM39-207ENST00000428404 IFIT1P09914 478 aaKnown RBP15.3■□□□□ 0.04
TRIM39-207ENST00000428404 GSPT1P15170 499 aaKnown RBP15.3■□□□□ 0.04
TRIM39-207ENST00000428404 C15orf52Q6ZUT6 534 aaKnown RBP15.3■□□□□ 0.04
TRIM39-207ENST00000428404 TTLL6Q8N841 843 aa15.3■□□□□ 0.04
TRIM39-207ENST00000428404 ZNF512BQ96KM6 892 aaPredicted RBP15.3■□□□□ 0.04
TRIM39-207ENST00000428404 LRRC37AA6NMS7 1700 aa15.29■□□□□ 0.04
TRIM39-207ENST00000428404 KIAA1551Q9HCM1 1747 aa15.29■□□□□ 0.04
TRIM39-207ENST00000428404 ZNF804BA4D1E1 1349 aa15.29■□□□□ 0.04
TRIM39-207ENST00000428404 ERC2O15083 957 aa15.29■□□□□ 0.04
TRIM39-207ENST00000428404 ATP2B4P23634 1241 aa15.29■□□□□ 0.04
TRIM39-207ENST00000428404 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.29■□□□□ 0.04
TRIM39-207ENST00000428404 ANKIB1Q9P2G1 1089 aa15.29■□□□□ 0.04
TRIM39-207ENST00000428404 A0A1B0GUL6 1792 aa15.29■□□□□ 0.04
TRIM39-207ENST00000428404 ZBTB22O15209 634 aa15.28■□□□□ 0.04
TRIM39-207ENST00000428404 CC2D2BQ6DHV5 1058 aa15.28■□□□□ 0.04
TRIM39-207ENST00000428404 OLFM4Q6UX06 510 aa15.28■□□□□ 0.04
TRIM39-207ENST00000428404 FBXO33Q7Z6M2 555 aa15.28■□□□□ 0.04
TRIM39-207ENST00000428404 PIM2Q9P1W9 311 aa15.28■□□□□ 0.04
TRIM39-207ENST00000428404 POLLQ9UGP5 575 aa15.28■□□□□ 0.04
TRIM39-207ENST00000428404 NSFL1CQ9UNZ2 370 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms