RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 KCNQ2O43526 872 aa20.69■□□□□ 0.9
PRDM5-203ENST00000428209 BRD1O95696 1058 aa20.69■□□□□ 0.9
PRDM5-203ENST00000428209 TTC39AQ5SRH9 613 aa20.69■□□□□ 0.9
PRDM5-203ENST00000428209 RIPOR2Q9Y4F9 1068 aa20.69■□□□□ 0.9
PRDM5-203ENST00000428209 ADORA1P30542 326 aa20.68■□□□□ 0.9
PRDM5-203ENST00000428209 METTL24Q5JXM2 366 aa20.68■□□□□ 0.9
PRDM5-203ENST00000428209 USPL1Q5W0Q7 1092 aa20.68■□□□□ 0.9
PRDM5-203ENST00000428209 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.68■□□□□ 0.9
PRDM5-203ENST00000428209 CNNM1Q9NRU3 951 aa20.68■□□□□ 0.9
PRDM5-203ENST00000428209 RPAP1Q9BWH6 1393 aaPredicted RBP20.68■□□□□ 0.9
PRDM5-203ENST00000428209 SH3TC1Q8TE82 1336 aa20.68■□□□□ 0.9
PRDM5-203ENST00000428209 HSPA1LP34931 641 aa20.67■□□□□ 0.9
PRDM5-203ENST00000428209 TICAM2Q86XR7 235 aa20.67■□□□□ 0.9
PRDM5-203ENST00000428209 SMARCC1Q92922 1105 aaPredicted RBP20.67■□□□□ 0.9
PRDM5-203ENST00000428209 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.67■□□□□ 0.9
PRDM5-203ENST00000428209 FKBP4Q02790 459 aaKnown RBP eCLIP20.67■□□□□ 0.9
PRDM5-203ENST00000428209 BLOC1S2Q6QNY1 142 aa20.67■□□□□ 0.9
PRDM5-203ENST00000428209 ZSCAN31Q96LW9 406 aaPredicted RBP20.67■□□□□ 0.9
PRDM5-203ENST00000428209 MYH3P11055 1940 aa20.66■□□□□ 0.9
PRDM5-203ENST00000428209 TSGA10IPQ3SY00 556 aa20.66■□□□□ 0.9
PRDM5-203ENST00000428209 HELLSQ9NRZ9 838 aa20.66■□□□□ 0.9
PRDM5-203ENST00000428209 TAF6LQ9Y6J9 622 aa20.66■□□□□ 0.9
PRDM5-203ENST00000428209 DDX49Q9Y6V7 483 aaKnown RBP20.66■□□□□ 0.9
PRDM5-203ENST00000428209 U3KPZ7 1027 aaPredicted RBP20.66■□□□□ 0.9
PRDM5-203ENST00000428209 GOLGA6L3A6NEY3 463 aa20.65■□□□□ 0.9
PRDM5-203ENST00000428209 LARGE1O95461 756 aa20.65■□□□□ 0.9
PRDM5-203ENST00000428209 VPS72Q15906 364 aa20.65■□□□□ 0.9
PRDM5-203ENST00000428209 ATP2B3Q16720 1220 aa20.65■□□□□ 0.9
PRDM5-203ENST00000428209 SLFNL1Q499Z3 407 aa20.65■□□□□ 0.9
PRDM5-203ENST00000428209 L1TD1Q5T7N2 865 aaKnown RBP20.65■□□□□ 0.9
PRDM5-203ENST00000428209 SUSD4Q5VX71 490 aa20.65■□□□□ 0.9
PRDM5-203ENST00000428209 SH2B1Q9NRF2 756 aaPredicted RBP20.65■□□□□ 0.9
PRDM5-203ENST00000428209 FAM177BA6PVY3 158 aa20.65■□□□□ 0.9
PRDM5-203ENST00000428209 LMBRD1Q9NUN5 540 aa20.65■□□□□ 0.9
PRDM5-203ENST00000428209 CAMTA2O94983 1202 aa20.64■□□□□ 0.89
PRDM5-203ENST00000428209 KRT32Q14532 448 aa20.64■□□□□ 0.89
PRDM5-203ENST00000428209 RIC1Q4ADV7 1423 aa20.64■□□□□ 0.89
PRDM5-203ENST00000428209 RNF113AO15541 343 aaKnown RBP20.64■□□□□ 0.89
PRDM5-203ENST00000428209 KLHL40Q2TBA0 621 aa20.64■□□□□ 0.89
PRDM5-203ENST00000428209 ZMYM1Q5SVZ6 1142 aa20.64■□□□□ 0.89
PRDM5-203ENST00000428209 CCDC83Q8IWF9 413 aa20.64■□□□□ 0.89
PRDM5-203ENST00000428209 UTP14AQ9BVJ6 771 aaKnown RBP20.64■□□□□ 0.89
PRDM5-203ENST00000428209 SMC3Q9UQE7 1217 aa20.64■□□□□ 0.89
PRDM5-203ENST00000428209 BCL9LQ86UU0 1499 aa20.63■□□□□ 0.89
PRDM5-203ENST00000428209 PRPF40AO75400 957 aaKnown RBP20.63■□□□□ 0.89
PRDM5-203ENST00000428209 RPS6KB1P23443 525 aa20.63■□□□□ 0.89
PRDM5-203ENST00000428209 COL9A3Q14050 684 aaPredicted RBP20.63■□□□□ 0.89
PRDM5-203ENST00000428209 AK7Q96M32 723 aa20.63■□□□□ 0.89
PRDM5-203ENST00000428209 MYH14Q7Z406 1995 aaKnown RBP20.63■□□□□ 0.89
PRDM5-203ENST00000428209 SPATA31A6Q5VVP1 1343 aa20.63■□□□□ 0.89
PRDM5-203ENST00000428209 WDR33Q9C0J8 1336 aaKnown RBP20.63■□□□□ 0.89
PRDM5-203ENST00000428209 HCLS1P14317 486 aaPredicted RBP20.62■□□□□ 0.89
PRDM5-203ENST00000428209 CHAMP1Q96JM3 812 aa20.62■□□□□ 0.89
PRDM5-203ENST00000428209 SPEF2Q9C093 1822 aa20.62■□□□□ 0.89
PRDM5-203ENST00000428209 FSD2A1L4K1 749 aa20.62■□□□□ 0.89
PRDM5-203ENST00000428209 ANKRD1Q15327 319 aa20.62■□□□□ 0.89
PRDM5-203ENST00000428209 ME3Q16798 604 aa20.62■□□□□ 0.89
PRDM5-203ENST00000428209 LRRFIP1Q32MZ4 808 aaKnown RBP20.62■□□□□ 0.89
PRDM5-203ENST00000428209 PARP10Q53GL7 1025 aa20.62■□□□□ 0.89
PRDM5-203ENST00000428209 TCEANC2Q96MN5 208 aa20.62■□□□□ 0.89
PRDM5-203ENST00000428209 SCARF1Q14162 830 aa20.61■□□□□ 0.89
PRDM5-203ENST00000428209 TPCN1Q9ULQ1 816 aa20.61■□□□□ 0.89
PRDM5-203ENST00000428209 CYP21A2P08686 494 aa20.61■□□□□ 0.89
PRDM5-203ENST00000428209 NEK1Q96PY6 1258 aa20.61■□□□□ 0.89
PRDM5-203ENST00000428209 NIP7Q9Y221 180 aaKnown RBP eCLIP20.61■□□□□ 0.89
PRDM5-203ENST00000428209 PDE8BO95263 885 aa20.6■□□□□ 0.89
PRDM5-203ENST00000428209 ZAP70P43403 619 aa20.6■□□□□ 0.89
PRDM5-203ENST00000428209 VGLL2Q8N8G2 317 aa20.6■□□□□ 0.89
PRDM5-203ENST00000428209 DSCC1Q9BVC3 393 aa20.6■□□□□ 0.89
PRDM5-203ENST00000428209 ALDH8A1Q9H2A2 487 aaPredicted RBP20.6■□□□□ 0.89
PRDM5-203ENST00000428209 NCLP19338 710 aaKnown RBP20.6■□□□□ 0.89
PRDM5-203ENST00000428209 RREB1Q92766 1687 aa20.6■□□□□ 0.89
PRDM5-203ENST00000428209 FNBP4Q8N3X1 1017 aaPredicted RBP20.59■□□□□ 0.89
PRDM5-203ENST00000428209 NECAB1Q8N987 351 aa20.59■□□□□ 0.89
PRDM5-203ENST00000428209 MAST3O60307 1309 aa20.59■□□□□ 0.89
PRDM5-203ENST00000428209 CICQ96RK0 1608 aaPredicted RBP20.58■□□□□ 0.89
PRDM5-203ENST00000428209 HSPD1P10809 573 aaKnown RBP20.58■□□□□ 0.89
PRDM5-203ENST00000428209 SYT1P21579 422 aa20.58■□□□□ 0.89
PRDM5-203ENST00000428209 GJB2P29033 226 aa20.58■□□□□ 0.89
PRDM5-203ENST00000428209 PI16Q6UXB8 463 aa20.58■□□□□ 0.89
PRDM5-203ENST00000428209 ZNF652Q9Y2D9 606 aa20.58■□□□□ 0.89
PRDM5-203ENST00000428209 ABCC12Q96J65 1359 aa20.58■□□□□ 0.88
PRDM5-203ENST00000428209 STX6O43752 255 aa20.58■□□□□ 0.88
PRDM5-203ENST00000428209 ZFYP08048 801 aaPredicted RBP20.58■□□□□ 0.88
PRDM5-203ENST00000428209 TOB2Q14106 344 aaPredicted RBP20.58■□□□□ 0.88
PRDM5-203ENST00000428209 OSBP2Q969R2 916 aa20.58■□□□□ 0.88
PRDM5-203ENST00000428209 BRPF3Q9ULD4 1205 aa20.58■□□□□ 0.88
PRDM5-203ENST00000428209 M0R2C6 588 aa20.57■□□□□ 0.88
PRDM5-203ENST00000428209 ST3GAL1Q11201 340 aa20.57■□□□□ 0.88
PRDM5-203ENST00000428209 WASHC4Q2M389 1173 aa20.57■□□□□ 0.88
PRDM5-203ENST00000428209 FOXD4L6Q3SYB3 417 aaPredicted RBP20.57■□□□□ 0.88
PRDM5-203ENST00000428209 FOXD4L3Q6VB84 417 aaPredicted RBP20.57■□□□□ 0.88
PRDM5-203ENST00000428209 LINC00116Q8NCU8 138 aa20.57■□□□□ 0.88
PRDM5-203ENST00000428209 FBXO41Q8TF61 875 aa20.57■□□□□ 0.88
PRDM5-203ENST00000428209 USP21Q9UK80 565 aa20.57■□□□□ 0.88
PRDM5-203ENST00000428209 MROH5Q6ZUA9 1318 aa20.57■□□□□ 0.88
PRDM5-203ENST00000428209 HSP90B1P14625 803 aaKnown RBP20.56■□□□□ 0.88
PRDM5-203ENST00000428209 MCAMP43121 646 aa20.56■□□□□ 0.88
PRDM5-203ENST00000428209 KCNQ4P56696 695 aa20.56■□□□□ 0.88
PRDM5-203ENST00000428209 HELBQ8NG08 1087 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms