RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 MINPP1Q9UNW1 487 aa18.81■□□□□ 0.6
VARS2-203ENST00000428017 XDHP47989 1333 aa18.8■□□□□ 0.6
VARS2-203ENST00000428017 MROH5Q6ZUA9 1318 aa18.8■□□□□ 0.6
VARS2-203ENST00000428017 EYA2O00167 538 aa18.8■□□□□ 0.6
VARS2-203ENST00000428017 KCNJ4P48050 445 aa18.8■□□□□ 0.6
VARS2-203ENST00000428017 G3BP1Q13283 466 aaKnown RBP eCLIP18.8■□□□□ 0.61e-6■■■□□ 15.2
VARS2-203ENST00000428017 OS9Q13438 667 aaPredicted RBP18.8■□□□□ 0.6
VARS2-203ENST00000428017 POLA2Q14181 598 aa18.8■□□□□ 0.6
VARS2-203ENST00000428017 TAOK3Q9H2K8 898 aa18.8■□□□□ 0.6
VARS2-203ENST00000428017 PA2G4Q9UQ80 394 aaKnown RBP18.8■□□□□ 0.6
VARS2-203ENST00000428017 SLX4Q8IY92 1834 aa18.79■□□□□ 0.6
VARS2-203ENST00000428017 C6orf229H3BNL8 230 aa18.79■□□□□ 0.6
VARS2-203ENST00000428017 CIAO1O76071 339 aa18.79■□□□□ 0.6
VARS2-203ENST00000428017 GPSM2P81274 684 aa18.79■□□□□ 0.6
VARS2-203ENST00000428017 CHRNDQ07001 517 aa18.79■□□□□ 0.6
VARS2-203ENST00000428017 METTL24Q5JXM2 366 aa18.79■□□□□ 0.6
VARS2-203ENST00000428017 SUPT20HQ8NEM7 779 aa18.79■□□□□ 0.6
VARS2-203ENST00000428017 PUS3Q9BZE2 481 aaKnown RBP18.79■□□□□ 0.6
VARS2-203ENST00000428017 GGA1Q9UJY5 639 aa18.79■□□□□ 0.6
VARS2-203ENST00000428017 BRCA1P38398 1863 aaKnown RBP18.78■□□□□ 0.6
VARS2-203ENST00000428017 SURF6O75683 361 aaKnown RBP18.78■□□□□ 0.6
VARS2-203ENST00000428017 IL15P40933 162 aaPredicted RBP18.78■□□□□ 0.6
VARS2-203ENST00000428017 FKBP4Q02790 459 aaKnown RBP eCLIP18.78■□□□□ 0.6
VARS2-203ENST00000428017 LRRC24Q50LG9 513 aa18.78■□□□□ 0.6
VARS2-203ENST00000428017 COL4A1P02462 1669 aa18.77■□□□□ 0.6
VARS2-203ENST00000428017 UFL1O94874 794 aa18.77■□□□□ 0.6
VARS2-203ENST00000428017 ATP2B4P23634 1241 aa18.77■□□□□ 0.6
VARS2-203ENST00000428017 HSP90AB4PQ58FF6 505 aa18.77■□□□□ 0.6
VARS2-203ENST00000428017 SLC51AQ86UW1 340 aa18.77■□□□□ 0.6
VARS2-203ENST00000428017 PSMD1Q99460 953 aa18.77■□□□□ 0.6
VARS2-203ENST00000428017 PODXL2Q9NZ53 605 aa18.77■□□□□ 0.6
VARS2-203ENST00000428017 RIPOR2Q9Y4F9 1068 aa18.77■□□□□ 0.6
VARS2-203ENST00000428017 NFKBIEO00221 500 aa18.76■□□□□ 0.59
VARS2-203ENST00000428017 HELBQ8NG08 1087 aaPredicted RBP18.76■□□□□ 0.59
VARS2-203ENST00000428017 EYA3Q99504 573 aa18.76■□□□□ 0.59
VARS2-203ENST00000428017 CEP126Q9P2H0 1117 aa18.76■□□□□ 0.59
VARS2-203ENST00000428017 LEMD3Q9Y2U8 911 aa18.76■□□□□ 0.59
VARS2-203ENST00000428017 PCDHB15Q9Y5E8 787 aa18.76■□□□□ 0.59
VARS2-203ENST00000428017 TAF5LO75529 589 aa18.75■□□□□ 0.59
VARS2-203ENST00000428017 RASSF7Q02833 373 aa18.75■□□□□ 0.59
VARS2-203ENST00000428017 SIRT2Q8IXJ6 389 aa18.75■□□□□ 0.59
VARS2-203ENST00000428017 TBC1D16Q8TBP0 767 aa18.75■□□□□ 0.59
VARS2-203ENST00000428017 LTBP3Q9NS15 1303 aa18.74■□□□□ 0.59
VARS2-203ENST00000428017 CACNA1SQ13698 1873 aa18.74■□□□□ 0.59
VARS2-203ENST00000428017 ATG9AQ7Z3C6 839 aa18.74■□□□□ 0.59
VARS2-203ENST00000428017 ERC1Q8IUD2 1116 aa18.74■□□□□ 0.59
VARS2-203ENST00000428017 RTFDC1Q9BY42 306 aaPredicted RBP18.74■□□□□ 0.59
VARS2-203ENST00000428017 ZNF277Q9NRM2 450 aaPredicted RBP18.74■□□□□ 0.59
VARS2-203ENST00000428017 ARFGEF1Q9Y6D6 1849 aa18.74■□□□□ 0.59
VARS2-203ENST00000428017 ZNF804BA4D1E1 1349 aa18.74■□□□□ 0.59
VARS2-203ENST00000428017 TAF1P21675 1872 aa18.73■□□□□ 0.59
VARS2-203ENST00000428017 PPIP5K2O43314 1243 aa18.73■□□□□ 0.59
VARS2-203ENST00000428017 LMNB1P20700 586 aa18.73■□□□□ 0.59
VARS2-203ENST00000428017 WASHC4Q2M389 1173 aa18.73■□□□□ 0.59
VARS2-203ENST00000428017 ZC3H12CQ9C0D7 883 aaKnown RBP18.73■□□□□ 0.59
VARS2-203ENST00000428017 POLLQ9UGP5 575 aa18.73■□□□□ 0.59
VARS2-203ENST00000428017 EXOC6BQ9Y2D4 811 aa18.73■□□□□ 0.59
VARS2-203ENST00000428017 NOP58Q9Y2X3 529 aaKnown RBP18.73■□□□□ 0.59
VARS2-203ENST00000428017 G3V3G9 751 aa18.72■□□□□ 0.59
VARS2-203ENST00000428017 PDE8BO95263 885 aa18.72■□□□□ 0.59
VARS2-203ENST00000428017 IARSP41252 1262 aaKnown RBP18.72■□□□□ 0.59
VARS2-203ENST00000428017 PUM3Q15397 648 aaKnown RBP18.72■□□□□ 0.59
VARS2-203ENST00000428017 DCAF8Q5TAQ9 597 aa18.72■□□□□ 0.59
VARS2-203ENST00000428017 LARGE2Q8N3Y3 721 aa18.72■□□□□ 0.59
VARS2-203ENST00000428017 VPS33BQ9H267 617 aa18.72■□□□□ 0.59
VARS2-203ENST00000428017 RWDD1Q9H446 243 aaPredicted RBP18.72■□□□□ 0.59
VARS2-203ENST00000428017 LRRC37AA6NMS7 1700 aa18.71■□□□□ 0.59
VARS2-203ENST00000428017 RIMBP2O15034 1052 aa18.71■□□□□ 0.59
VARS2-203ENST00000428017 TFCP2Q12800 502 aa18.71■□□□□ 0.59
VARS2-203ENST00000428017 UBE4AQ14139 1066 aa18.71■□□□□ 0.59
VARS2-203ENST00000428017 JDP2Q8WYK2 163 aa18.71■□□□□ 0.59
VARS2-203ENST00000428017 AKAP2Q9Y2D5 859 aa18.71■□□□□ 0.59
VARS2-203ENST00000428017 SNED1Q8TER0 1413 aa18.71■□□□□ 0.59
VARS2-203ENST00000428017 APBB1O00213 710 aa18.7■□□□□ 0.58
VARS2-203ENST00000428017 RAB11FIP3O75154 756 aa18.7■□□□□ 0.58
VARS2-203ENST00000428017 IFIT1P09914 478 aaKnown RBP18.7■□□□□ 0.58
VARS2-203ENST00000428017 SLC5A1P13866 664 aa18.7■□□□□ 0.58
VARS2-203ENST00000428017 AOC3Q16853 763 aa18.7■□□□□ 0.58
VARS2-203ENST00000428017 VGLL2Q8N8G2 317 aa18.7■□□□□ 0.58
VARS2-203ENST00000428017 GPR101Q96P66 508 aaPredicted RBP18.7■□□□□ 0.58
VARS2-203ENST00000428017 RNF181Q9P0P0 153 aa18.7■□□□□ 0.58
VARS2-203ENST00000428017 KIAA2012Q0VF49 1180 aa18.69■□□□□ 0.58
VARS2-203ENST00000428017 HDAC1Q13547 482 aaPredicted RBP18.69■□□□□ 0.58
VARS2-203ENST00000428017 ATP2B3Q16720 1220 aa18.69■□□□□ 0.58
VARS2-203ENST00000428017 C9orf131Q5VYM1 1079 aa18.69■□□□□ 0.58
VARS2-203ENST00000428017 NIM1KQ8IY84 436 aa18.69■□□□□ 0.58
VARS2-203ENST00000428017 LPIN2Q92539 896 aa18.69■□□□□ 0.58
VARS2-203ENST00000428017 ZBTB47Q9UFB7 747 aaPredicted RBP18.69■□□□□ 0.58
VARS2-203ENST00000428017 SPEF2Q9C093 1822 aa18.69■□□□□ 0.58
VARS2-203ENST00000428017 MED23Q9ULK4 1368 aa18.68■□□□□ 0.58
VARS2-203ENST00000428017 KIF1BPQ96EK5 621 aa18.68■□□□□ 0.58
VARS2-203ENST00000428017 WTIPA6NIX2 430 aaPredicted RBP18.67■□□□□ 0.58
VARS2-203ENST00000428017 SNAP23O00161 211 aa18.67■□□□□ 0.58
VARS2-203ENST00000428017 SASH1O94885 1247 aa18.67■□□□□ 0.58
VARS2-203ENST00000428017 CAVIN4Q5BKX8 364 aa18.67■□□□□ 0.58
VARS2-203ENST00000428017 ZNF804AQ7Z570 1209 aa18.67■□□□□ 0.58
VARS2-203ENST00000428017 VPS37DQ86XT2 251 aa18.67■□□□□ 0.58
VARS2-203ENST00000428017 RHPN1Q8TCX5 695 aa18.67■□□□□ 0.58
VARS2-203ENST00000428017 BCL11AQ9H165 835 aa18.67■□□□□ 0.58
VARS2-203ENST00000428017 DCTPP1Q9H773 170 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms