RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TIGD1Q96MW7 591 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 ARHGEF10LQ9HCE6 1279 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 TMCO5BA8MYB1 307 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 CRCPO75575 148 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 DUSP27Q5VZP5 1158 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 BANK1Q8NDB2 785 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 NSMCE1Q8WV22 266 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 C8orf76Q96K31 380 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 GTPBP4Q9BZE4 634 aaKnown RBP6.53□□□□□ -1.36
HERC4-206ENST00000427635 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.53□□□□□ -1.36
HERC4-206ENST00000427635 KIF21BO75037 1637 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 CNGA1P29973 690 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 TERF1P54274 439 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 SPC24Q8NBT2 197 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 MAK16Q9BXY0 300 aaKnown RBP6.53□□□□□ -1.36
HERC4-206ENST00000427635 CLIP2Q9UDT6 1046 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 CSADQ9Y600 493 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 APBA3O96018 575 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 C6orf163Q5TEZ5 329 aa6.53□□□□□ -1.36
HERC4-206ENST00000427635 SMCR8Q8TEV9 937 aaPredicted RBP6.53□□□□□ -1.36
HERC4-206ENST00000427635 FAM193BQ96PV7 902 aaPredicted RBP6.53□□□□□ -1.36
HERC4-206ENST00000427635 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.53□□□□□ -1.36
HERC4-206ENST00000427635 TMA7Q9Y2S6 64 aaKnown RBP6.53□□□□□ -1.36
HERC4-206ENST00000427635 V9GYY5 206 aaPredicted RBP6.53□□□□□ -1.36
HERC4-206ENST00000427635 SNAPC4Q5SXM2 1469 aa6.52□□□□□ -1.36
HERC4-206ENST00000427635 YEATS4O95619 227 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 SNRPA1P09661 255 aaKnown RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 PABPC4Q13310 644 aaKnown RBP eCLIP6.52□□□□□ -1.37
HERC4-206ENST00000427635 NBPF20Q3BBV1 942 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 DCPSQ96C86 337 aaKnown RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 NAA15Q9BXJ9 866 aaKnown RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 CGNQ9P2M7 1197 aaKnown RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 C9orf84Q5VXU9 1444 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 IDEP14735 1019 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 CYP7A1P22680 504 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 SH3BGRP55822 239 aaPredicted RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 MAP7D1Q3KQU3 841 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 MAP9Q49MG5 647 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 ZNF569Q5MCW4 686 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 IFIT1BQ5T764 474 aaKnown RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 UTP14CQ5TAP6 766 aaKnown RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 KLHL10Q6JEL2 608 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 CAVIN1Q6NZI2 390 aaKnown RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 ZBTB33Q86T24 672 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 LARGE2Q8N3Y3 721 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 GABPB2Q8TAK5 448 aaPredicted RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 KRT23Q9C075 422 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 HECW1Q76N89 1606 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 MAST3O60307 1309 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 ZBED9Q6R2W3 1325 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 DYTNA2CJ06 578 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 ZEB2O60315 1214 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 ZBED4O75132 1171 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 PAFAH1B1P43034 410 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 KIF5AQ12840 1032 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 PRPF4BQ13523 1007 aaKnown RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 DDX11Q96FC9 970 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 BOLA2Q9H3K6 86 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 GABBR1Q9UBS5 961 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 NAA16Q6N069 864 aaPredicted RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 TSHZ1Q6ZSZ6 1077 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 RRP36Q96EU6 259 aaKnown RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 NUP88Q99567 741 aaPredicted RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.52□□□□□ -1.37
HERC4-206ENST00000427635 PALM3A6NDB9 673 aaPredicted RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 DKC1O60832 514 aaKnown RBP eCLIP6.52□□□□□ -1.37
HERC4-206ENST00000427635 CFAP100Q494V2 611 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 HEATR3Q7Z4Q2 680 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 WDR63Q8IWG1 891 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 IQCGQ9H095 443 aaKnown RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 GBP3Q9H0R5 595 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 DBF4Q9UBU7 674 aaPredicted RBP6.52□□□□□ -1.37
HERC4-206ENST00000427635 STX8Q9UNK0 236 aa6.52□□□□□ -1.37
HERC4-206ENST00000427635 PRPF40AO75400 957 aaKnown RBP6.51□□□□□ -1.37
HERC4-206ENST00000427635 GMNNO75496 209 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 CHRM1P11229 460 aaPredicted RBP6.51□□□□□ -1.37
HERC4-206ENST00000427635 CALML3P27482 149 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 NUP62CLQ9H1M0 184 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 AS3MTQ9HBK9 375 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 IL1RAPL2Q9NP60 686 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 ZBTB21Q9ULJ3 1066 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 FAM169AQ9Y6X4 670 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 CASQ1P31415 396 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 PRPHP41219 470 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 NASPP49321 788 aaPredicted RBP6.51□□□□□ -1.37
HERC4-206ENST00000427635 CHRNA2Q15822 529 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 FAM47CQ5HY64 1035 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 CCDC83Q8IWF9 413 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 ANAPC4Q9UJX5 808 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 NBPF7P0C2Y1 421 aaPredicted RBP6.51□□□□□ -1.37
HERC4-206ENST00000427635 UBA7P41226 1012 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 CEBPAP49715 358 aaPredicted RBP6.51□□□□□ -1.37
HERC4-206ENST00000427635 RMND1Q9NWS8 449 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 TXNDC16Q9P2K2 825 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 VGLL3A8MV65 326 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 GNPATO15228 680 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 KIF5CO60282 957 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 PPP2R1AP30153 589 aa6.51□□□□□ -1.37
HERC4-206ENST00000427635 PSMC4P43686 418 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms