RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 COL4A5P29400 1685 aa31.54■■■□□ 2.64
HERPUD2-205ENST00000427455 MS4A1P11836 297 aa31.53■■■□□ 2.64
HERPUD2-205ENST00000427455 RLBP1P12271 317 aa31.53■■■□□ 2.64
HERPUD2-205ENST00000427455 JDP2Q8WYK2 163 aa31.53■■■□□ 2.64
HERPUD2-205ENST00000427455 MINPP1Q9UNW1 487 aa31.53■■■□□ 2.64
HERPUD2-205ENST00000427455 AOC3Q16853 763 aa31.52■■■□□ 2.64
HERPUD2-205ENST00000427455 LRRFIP2Q9Y608 721 aaKnown RBP31.52■■■□□ 2.64
HERPUD2-205ENST00000427455 KIAA2012Q0VF49 1180 aa31.51■■■□□ 2.63
HERPUD2-205ENST00000427455 TBC1D16Q8TBP0 767 aa31.51■■■□□ 2.63
HERPUD2-205ENST00000427455 POLLQ9UGP5 575 aa31.51■■■□□ 2.63
HERPUD2-205ENST00000427455 GGA1Q9UJY5 639 aa31.51■■■□□ 2.63
HERPUD2-205ENST00000427455 C6orf229H3BNL8 230 aa31.5■■■□□ 2.63
HERPUD2-205ENST00000427455 UFL1O94874 794 aa31.5■■■□□ 2.63
HERPUD2-205ENST00000427455 ITPRIPQ8IWB1 547 aa31.5■■■□□ 2.63
HERPUD2-205ENST00000427455 ZNF526Q8TF50 670 aaPredicted RBP31.5■■■□□ 2.63
HERPUD2-205ENST00000427455 KDM2BQ8NHM5 1336 aa31.49■■■□□ 2.63
HERPUD2-205ENST00000427455 NIM1KQ8IY84 436 aa31.49■■■□□ 2.63
HERPUD2-205ENST00000427455 ZNF594Q96JF6 807 aaPredicted RBP31.49■■■□□ 2.63
HERPUD2-205ENST00000427455 EYA3Q99504 573 aa31.49■■■□□ 2.63
HERPUD2-205ENST00000427455 GPBP1L1Q9HC44 474 aaPredicted RBP31.49■■■□□ 2.63
HERPUD2-205ENST00000427455 A0A1B0GUL6 1792 aa31.48■■■□□ 2.63
HERPUD2-205ENST00000427455 WASHC4Q2M389 1173 aa31.48■■■□□ 2.63
HERPUD2-205ENST00000427455 LDHAL6AQ6ZMR3 332 aa31.48■■■□□ 2.63
HERPUD2-205ENST00000427455 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.48■■■□□ 2.63
HERPUD2-205ENST00000427455 PANK1Q8TE04 598 aa31.48■■■□□ 2.63
HERPUD2-205ENST00000427455 ANKRD2Q9GZV1 360 aa31.48■■■□□ 2.63
HERPUD2-205ENST00000427455 GLTPD2A6NH11 291 aa31.47■■■□□ 2.63
HERPUD2-205ENST00000427455 FZD9O00144 591 aa31.47■■■□□ 2.63
HERPUD2-205ENST00000427455 ATP2B4P23634 1241 aa31.47■■■□□ 2.63
HERPUD2-205ENST00000427455 CHRNDQ07001 517 aa31.46■■■□□ 2.63
HERPUD2-205ENST00000427455 DPY19L2Q6NUT2 758 aa31.46■■■□□ 2.63
HERPUD2-205ENST00000427455 CNNM1Q9NRU3 951 aa31.46■■■□□ 2.63
HERPUD2-205ENST00000427455 PLIN1O60240 522 aa31.45■■■□□ 2.63
HERPUD2-205ENST00000427455 GNAI2P04899 355 aa31.45■■■□□ 2.63
HERPUD2-205ENST00000427455 GPR101Q96P66 508 aaPredicted RBP31.44■■■□□ 2.62
HERPUD2-205ENST00000427455 ZNF541Q9H0D2 1346 aa31.44■■■□□ 2.62
HERPUD2-205ENST00000427455 LEMD3Q9Y2U8 911 aa31.43■■■□□ 2.62
HERPUD2-205ENST00000427455 EIF6P56537 245 aaKnown RBP31.42■■■□□ 2.62
HERPUD2-205ENST00000427455 ZC3H12CQ9C0D7 883 aaKnown RBP31.42■■■□□ 2.62
HERPUD2-205ENST00000427455 ZNRF3Q9ULT6 936 aa31.42■■■□□ 2.62
HERPUD2-205ENST00000427455 MED23Q9ULK4 1368 aa31.42■■■□□ 2.62
HERPUD2-205ENST00000427455 WDR90Q96KV7 1748 aa31.41■■■□□ 2.62
HERPUD2-205ENST00000427455 RIMBP2O15034 1052 aa31.41■■■□□ 2.62
HERPUD2-205ENST00000427455 RFX5P48382 616 aaPredicted RBP31.41■■■□□ 2.62
HERPUD2-205ENST00000427455 ZBTB7BO15156 539 aaPredicted RBP31.4■■■□□ 2.62
HERPUD2-205ENST00000427455 MTX1Q13505 466 aa31.4■■■□□ 2.62
HERPUD2-205ENST00000427455 PUS3Q9BZE2 481 aaKnown RBP31.4■■■□□ 2.62
HERPUD2-205ENST00000427455 ZNF804BA4D1E1 1349 aa31.4■■■□□ 2.62
HERPUD2-205ENST00000427455 KCNJ4P48050 445 aa31.39■■■□□ 2.62
HERPUD2-205ENST00000427455 MVPQ14764 893 aaKnown RBP31.39■■■□□ 2.62
HERPUD2-205ENST00000427455 KLHDC4Q8TBB5 520 aa31.39■■■□□ 2.62
HERPUD2-205ENST00000427455 DDNO94850 711 aaPredicted RBP31.38■■■□□ 2.61
HERPUD2-205ENST00000427455 PTPN12Q05209 780 aaKnown RBP31.38■■■□□ 2.61
HERPUD2-205ENST00000427455 PDE3AQ14432 1141 aa31.38■■■□□ 2.61
HERPUD2-205ENST00000427455 NMRK2Q9NPI5 230 aa31.38■■■□□ 2.61
HERPUD2-205ENST00000427455 RIPOR2Q9Y4F9 1068 aa31.38■■■□□ 2.61
HERPUD2-205ENST00000427455 MROH5Q6ZUA9 1318 aa31.38■■■□□ 2.61
HERPUD2-205ENST00000427455 WTIPA6NIX2 430 aaPredicted RBP31.37■■■□□ 2.61
HERPUD2-205ENST00000427455 TAF5LO75529 589 aa31.37■■■□□ 2.61
HERPUD2-205ENST00000427455 GPC2Q8N158 579 aa31.37■■■□□ 2.61
HERPUD2-205ENST00000427455 HELBQ8NG08 1087 aaPredicted RBP31.37■■■□□ 2.61
HERPUD2-205ENST00000427455 DBNDD1Q9H9R9 158 aa31.37■■■□□ 2.61
HERPUD2-205ENST00000427455 SRGAP3O43295 1099 aa31.36■■■□□ 2.61
HERPUD2-205ENST00000427455 LRRC24Q50LG9 513 aa31.36■■■□□ 2.61
HERPUD2-205ENST00000427455 DDX19BQ9UMR2 479 aa31.36■■■□□ 2.61
HERPUD2-205ENST00000427455 ECE2O60344 883 aa31.35■■■□□ 2.61
HERPUD2-205ENST00000427455 FBXO3Q9UK99 471 aa31.35■■■□□ 2.61
HERPUD2-205ENST00000427455 COG6Q9Y2V7 657 aa31.35■■■□□ 2.61
HERPUD2-205ENST00000427455 YDJCA8MPS7 323 aa31.34■■■□□ 2.61
HERPUD2-205ENST00000427455 G3V3G9 751 aa31.34■■■□□ 2.61
HERPUD2-205ENST00000427455 EYA2O00167 538 aa31.34■■■□□ 2.61
HERPUD2-205ENST00000427455 DOK7Q18PE1 504 aa31.34■■■□□ 2.61
HERPUD2-205ENST00000427455 DCAF8Q5TAQ9 597 aa31.34■■■□□ 2.61
HERPUD2-205ENST00000427455 L3MBTL3Q96JM7 780 aaPredicted RBP31.34■■■□□ 2.61
HERPUD2-205ENST00000427455 CXCL9Q07325 125 aa31.33■■■□□ 2.61
HERPUD2-205ENST00000427455 METTL24Q5JXM2 366 aa31.33■■■□□ 2.61
HERPUD2-205ENST00000427455 C20orf194Q5TEA3 1177 aa31.33■■■□□ 2.61
HERPUD2-205ENST00000427455 C1orf115Q9H7X2 142 aa31.33■■■□□ 2.61
HERPUD2-205ENST00000427455 RRAGCQ9HB90 399 aa31.33■■■□□ 2.61
HERPUD2-205ENST00000427455 COPRSQ9NQ92 184 aa31.32■■■□□ 2.6
HERPUD2-205ENST00000427455 GJA3Q9Y6H8 435 aa31.32■■■□□ 2.6
HERPUD2-205ENST00000427455 KIF3CO14782 793 aa31.31■■■□□ 2.6
HERPUD2-205ENST00000427455 CIAO1O76071 339 aa31.31■■■□□ 2.6
HERPUD2-205ENST00000427455 RRP1P56182 461 aaKnown RBP31.31■■■□□ 2.6
HERPUD2-205ENST00000427455 CIAPIN1Q6FI81 312 aa31.31■■■□□ 2.6
HERPUD2-205ENST00000427455 C15orf52Q6ZUT6 534 aaKnown RBP31.31■■■□□ 2.6
HERPUD2-205ENST00000427455 CHMP4BQ9H444 224 aaKnown RBP31.31■■■□□ 2.6
HERPUD2-205ENST00000427455 SCN4AP35499 1836 aa31.31■■■□□ 2.6
HERPUD2-205ENST00000427455 IRS2Q9Y4H2 1338 aa31.3■■■□□ 2.6
HERPUD2-205ENST00000427455 SNAP23O00161 211 aa31.3■■■□□ 2.6
HERPUD2-205ENST00000427455 RAD17O75943 681 aa31.3■■■□□ 2.6
HERPUD2-205ENST00000427455 VEGFAP15692 232 aaPredicted RBP31.3■■■□□ 2.6
HERPUD2-205ENST00000427455 KLRK1P26718 216 aa31.3■■■□□ 2.6
HERPUD2-205ENST00000427455 TNIP1Q15025 636 aa31.3■■■□□ 2.6
HERPUD2-205ENST00000427455 SIL1Q9H173 461 aa31.3■■■□□ 2.6
HERPUD2-205ENST00000427455 PA2G4Q9UQ80 394 aaKnown RBP31.3■■■□□ 2.6
HERPUD2-205ENST00000427455 SCN9AQ15858 1988 aa31.29■■■□□ 2.6
HERPUD2-205ENST00000427455 PNMA6EA0A0J9YXQ4 647 aa31.29■■■□□ 2.6
HERPUD2-205ENST00000427455 UBE4AQ14139 1066 aa31.29■■■□□ 2.6
HERPUD2-205ENST00000427455 TXNRD3Q86VQ6 643 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms