RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 GPRC5DQ9NZD1 345 aa12.97□□□□□ -0.33
COMMD1-202ENST00000427417 POLLQ9UGP5 575 aa12.97□□□□□ -0.33
COMMD1-202ENST00000427417 CNTNAP1P78357 1384 aa12.96□□□□□ -0.33
COMMD1-202ENST00000427417 RTL9Q8NET4 1388 aa12.96□□□□□ -0.33
COMMD1-202ENST00000427417 CACNA1FO60840 1977 aa12.96□□□□□ -0.33
COMMD1-202ENST00000427417 TMEM88BA6NKF7 163 aa12.96□□□□□ -0.33
COMMD1-202ENST00000427417 G3V3G9 751 aa12.96□□□□□ -0.33
COMMD1-202ENST00000427417 DCAF8Q5TAQ9 597 aa12.96□□□□□ -0.33
COMMD1-202ENST00000427417 COL13A1Q5TAT6 717 aaPredicted RBP12.96□□□□□ -0.33
COMMD1-202ENST00000427417 UBE3BQ7Z3V4 1068 aa12.96□□□□□ -0.33
COMMD1-202ENST00000427417 TTLL11Q8NHH1 800 aa12.96□□□□□ -0.33
COMMD1-202ENST00000427417 DBNDD1Q9H9R9 158 aa12.96□□□□□ -0.33
COMMD1-202ENST00000427417 GGA1Q9UJY5 639 aa12.96□□□□□ -0.33
COMMD1-202ENST00000427417 XDHP47989 1333 aa12.95□□□□□ -0.34
COMMD1-202ENST00000427417 ZNF521Q96K83 1311 aa12.95□□□□□ -0.34
COMMD1-202ENST00000427417 TRAF5O00463 557 aa12.95□□□□□ -0.34
COMMD1-202ENST00000427417 ECE2O60344 883 aa12.95□□□□□ -0.34
COMMD1-202ENST00000427417 UFL1O94874 794 aa12.95□□□□□ -0.34
COMMD1-202ENST00000427417 TRPM4Q8TD43 1214 aa12.95□□□□□ -0.34
COMMD1-202ENST00000427417 PLA2G12BQ9BX93 195 aa12.95□□□□□ -0.34
COMMD1-202ENST00000427417 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
COMMD1-202ENST00000427417 E9PSI1 815 aa12.94□□□□□ -0.34
COMMD1-202ENST00000427417 H7C1D1 291 aa12.94□□□□□ -0.34
COMMD1-202ENST00000427417 ATP2B4P23634 1241 aa12.94□□□□□ -0.34
COMMD1-202ENST00000427417 RPS12P25398 132 aaKnown RBP12.94□□□□□ -0.34
COMMD1-202ENST00000427417 IGHMBP2P38935 993 aaKnown RBP12.94□□□□□ -0.34
COMMD1-202ENST00000427417 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
COMMD1-202ENST00000427417 GREM2Q9H772 168 aa12.94□□□□□ -0.34
COMMD1-202ENST00000427417 KCNQ5Q9NR82 932 aa12.94□□□□□ -0.34
COMMD1-202ENST00000427417 BSDC1Q9NW68 430 aaPredicted RBP12.94□□□□□ -0.34
COMMD1-202ENST00000427417 SPEF2Q9C093 1822 aa12.94□□□□□ -0.34
COMMD1-202ENST00000427417 SCN9AQ15858 1988 aa12.93□□□□□ -0.34
COMMD1-202ENST00000427417 PSMD14O00487 310 aa12.93□□□□□ -0.34
COMMD1-202ENST00000427417 VEGFBP49765 207 aa12.93□□□□□ -0.34
COMMD1-202ENST00000427417 ZC3H15Q8WU90 426 aaKnown RBP12.93□□□□□ -0.34
COMMD1-202ENST00000427417 DPF2Q92785 391 aa12.93□□□□□ -0.34
COMMD1-202ENST00000427417 CNOT7Q9UIV1 285 aaKnown RBP12.93□□□□□ -0.34
COMMD1-202ENST00000427417 CCER2I3L3R5 266 aa12.92□□□□□ -0.34
COMMD1-202ENST00000427417 ITGA6P23229 1130 aa12.92□□□□□ -0.34
COMMD1-202ENST00000427417 HIRAP54198 1017 aaPredicted RBP12.92□□□□□ -0.34
COMMD1-202ENST00000427417 CASP7P55210 303 aa12.92□□□□□ -0.34
COMMD1-202ENST00000427417 BEND3Q5T5X7 828 aa12.92□□□□□ -0.34
COMMD1-202ENST00000427417 MPHOSPH8Q99549 860 aa12.92□□□□□ -0.34
COMMD1-202ENST00000427417 ABT1Q9ULW3 272 aaKnown RBP12.92□□□□□ -0.34
COMMD1-202ENST00000427417 MYH3P11055 1940 aa12.92□□□□□ -0.34
COMMD1-202ENST00000427417 TRPM7Q96QT4 1865 aa12.91□□□□□ -0.34
COMMD1-202ENST00000427417 WTIPA6NIX2 430 aaPredicted RBP12.91□□□□□ -0.34
COMMD1-202ENST00000427417 F6X3S4 739 aa12.91□□□□□ -0.34
COMMD1-202ENST00000427417 CSF1RP07333 972 aa12.91□□□□□ -0.34
COMMD1-202ENST00000427417 MICALL2Q8IY33 904 aa12.91□□□□□ -0.34
COMMD1-202ENST00000427417 GLIS2Q9BZE0 524 aaPredicted RBP12.91□□□□□ -0.34
COMMD1-202ENST00000427417 ANKRD2Q9GZV1 360 aa12.91□□□□□ -0.34
COMMD1-202ENST00000427417 MINPP1Q9UNW1 487 aa12.91□□□□□ -0.34
COMMD1-202ENST00000427417 ANKRD18BA2A2Z9 1011 aa12.9□□□□□ -0.34
COMMD1-202ENST00000427417 ALDH1L1O75891 902 aa12.9□□□□□ -0.34
COMMD1-202ENST00000427417 EGFRP00533 1210 aa12.9□□□□□ -0.34
COMMD1-202ENST00000427417 VIL1P09327 827 aaKnown RBP12.9□□□□□ -0.34
COMMD1-202ENST00000427417 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
COMMD1-202ENST00000427417 CST9Q5W186 159 aa12.9□□□□□ -0.34
COMMD1-202ENST00000427417 SLC4A10Q6U841 1118 aa12.9□□□□□ -0.34
COMMD1-202ENST00000427417 DLK2Q6UY11 383 aa12.9□□□□□ -0.34
COMMD1-202ENST00000427417 SAMD7Q7Z3H4 446 aa12.9□□□□□ -0.34
COMMD1-202ENST00000427417 PODNQ7Z5L7 613 aa12.9□□□□□ -0.34
COMMD1-202ENST00000427417 PGAP2Q9UHJ9 254 aa12.9□□□□□ -0.34
COMMD1-202ENST00000427417 LEMD3Q9Y2U8 911 aa12.9□□□□□ -0.34
COMMD1-202ENST00000427417 MED23Q9ULK4 1368 aa12.9□□□□□ -0.34
COMMD1-202ENST00000427417 RASSF10A6NK89 507 aa12.89□□□□□ -0.35
COMMD1-202ENST00000427417 GRM8O00222 908 aa12.89□□□□□ -0.35
COMMD1-202ENST00000427417 FOXN1O15353 648 aa12.89□□□□□ -0.35
COMMD1-202ENST00000427417 CCT4P50991 539 aaKnown RBP12.89□□□□□ -0.35
COMMD1-202ENST00000427417 GRM1Q13255 1194 aa12.89□□□□□ -0.35
COMMD1-202ENST00000427417 IFIT5Q13325 482 aaKnown RBP12.89□□□□□ -0.35
COMMD1-202ENST00000427417 DEFB115Q30KQ5 88 aa12.89□□□□□ -0.35
COMMD1-202ENST00000427417 TBC1D10BQ4KMP7 808 aaPredicted RBP12.89□□□□□ -0.35
COMMD1-202ENST00000427417 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
COMMD1-202ENST00000427417 CDC37L1Q7L3B6 337 aa12.89□□□□□ -0.35
COMMD1-202ENST00000427417 SRCIN1Q9C0H9 1055 aa12.89□□□□□ -0.35
COMMD1-202ENST00000427417 C9orf78Q9NZ63 289 aaPredicted RBP12.89□□□□□ -0.35
COMMD1-202ENST00000427417 PTPRCP08575 1304 aa12.88□□□□□ -0.35
COMMD1-202ENST00000427417 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
COMMD1-202ENST00000427417 RBM26Q5T8P6 1007 aaKnown RBP12.88□□□□□ -0.35
COMMD1-202ENST00000427417 AGBL3Q8NEM8 1001 aa12.88□□□□□ -0.35
COMMD1-202ENST00000427417 ZNF408Q9H9D4 720 aa12.88□□□□□ -0.35
COMMD1-202ENST00000427417 CHMP3Q9Y3E7 222 aa12.88□□□□□ -0.35
COMMD1-202ENST00000427417 ZNF609O15014 1411 aa12.88□□□□□ -0.35
COMMD1-202ENST00000427417 POLR2AP24928 1970 aaKnown RBP12.87□□□□□ -0.35
COMMD1-202ENST00000427417 USP17L3A6NCW0 530 aa12.87□□□□□ -0.35
COMMD1-202ENST00000427417 USP17L4A6NCW7 530 aa12.87□□□□□ -0.35
COMMD1-202ENST00000427417 CAPN15O75808 1086 aa12.87□□□□□ -0.35
COMMD1-202ENST00000427417 CELF2O95319 508 aaKnown RBP12.87□□□□□ -0.35
COMMD1-202ENST00000427417 KCNJ4P48050 445 aa12.87□□□□□ -0.35
COMMD1-202ENST00000427417 FOXO4P98177 505 aa12.87□□□□□ -0.35
COMMD1-202ENST00000427417 CCDC57Q2TAC2 916 aa12.87□□□□□ -0.35
COMMD1-202ENST00000427417 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
COMMD1-202ENST00000427417 CYP4F22Q6NT55 531 aa12.87□□□□□ -0.35
COMMD1-202ENST00000427417 RSBN1LQ6PCB5 846 aaPredicted RBP12.87□□□□□ -0.35
COMMD1-202ENST00000427417 USP17L1Q7RTZ2 530 aa12.87□□□□□ -0.35
COMMD1-202ENST00000427417 TNS4Q8IZW8 715 aa12.87□□□□□ -0.35
COMMD1-202ENST00000427417 COA1Q9GZY4 146 aa12.87□□□□□ -0.35
COMMD1-202ENST00000427417 ZNF804BA4D1E1 1349 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms