RNA–Protein interactions for RNA: ENST00000427369.6

LRTOMT-206, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,299 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-206ENST00000427369 TMCO3Q6UWJ1 677 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 FMNL2Q96PY5 1086 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 NEK1Q96PY6 1258 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 FAM160A1Q05DH4 1040 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 SCRN1Q12765 414 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 MTX1Q13505 466 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 ENGASEQ8NFI3 743 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 UBXN4Q92575 508 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 SDF4Q9BRK5 362 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 TRIM34Q9BYJ4 488 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 SIL1Q9H173 461 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 HMG20BQ9P0W2 317 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 IMPACTQ9P2X3 320 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 DNAI1Q9UI46 699 aa14.53□□□□□ -0.08
LRTOMT-206ENST00000427369 LRRC37A3O60309 1634 aa14.52□□□□□ -0.08
LRTOMT-206ENST00000427369 NRXN3Q9Y4C0 1643 aa14.52□□□□□ -0.08
LRTOMT-206ENST00000427369 FMN2Q9NZ56 1722 aa14.52□□□□□ -0.09
LRTOMT-206ENST00000427369 KCNQ3O43525 872 aa14.52□□□□□ -0.09
LRTOMT-206ENST00000427369 TAF5LO75529 589 aa14.52□□□□□ -0.09
LRTOMT-206ENST00000427369 SEC31AO94979 1220 aaKnown RBP14.52□□□□□ -0.09
LRTOMT-206ENST00000427369 GUCY1B3Q02153 619 aa14.52□□□□□ -0.09
LRTOMT-206ENST00000427369 USHBP1Q8N6Y0 703 aa14.52□□□□□ -0.09
LRTOMT-206ENST00000427369 SNRKQ9NRH2 765 aa14.52□□□□□ -0.09
LRTOMT-206ENST00000427369 NALCNQ8IZF0 1738 aa14.52□□□□□ -0.09
LRTOMT-206ENST00000427369 ROBO2Q9HCK4 1378 aa14.52□□□□□ -0.09
LRTOMT-206ENST00000427369 MED23Q9ULK4 1368 aa14.52□□□□□ -0.09
LRTOMT-206ENST00000427369 PSDA5PKW4 1024 aaPredicted RBP14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 G3BP1Q13283 466 aaKnown RBP eCLIP14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 CWF19L2Q2TBE0 894 aaKnown RBP14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 TEX35Q5T0J7 233 aa14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 NUTM2GQ5VZR2 741 aa14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 CCDC150Q8NCX0 1101 aa14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 ARGLU1Q9NWB6 273 aaPredicted RBP14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 ZRANB2O95218 330 aaKnown RBP eCLIP14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 SLC20A2Q08357 652 aa14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 RAD51AP2Q09MP3 1159 aa14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 BABAM1Q9NWV8 329 aa14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 ORC3Q9UBD5 711 aaPredicted RBP14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 EIF4A1P60842 406 aaKnown RBP14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 MLECQ14165 292 aa14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 DPCR1Q3MIW9 517 aa14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 MNS1Q8NEH6 495 aa14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 SIRT1Q96EB6 747 aa14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 MAP3K2Q9Y2U5 619 aa14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 RICTORQ6R327 1708 aa14.51□□□□□ -0.09
LRTOMT-206ENST00000427369 A0A1B0GVL5 298 aa14.5□□□□□ -0.09
LRTOMT-206ENST00000427369 ZRSR1Q15695 479 aaKnown RBP14.5□□□□□ -0.09
LRTOMT-206ENST00000427369 TSGA10IPQ3SY00 556 aa14.5□□□□□ -0.09
LRTOMT-206ENST00000427369 BIN1O00499 593 aa14.5□□□□□ -0.09
LRTOMT-206ENST00000427369 ST5P78524 1137 aa14.5□□□□□ -0.09
LRTOMT-206ENST00000427369 KRT32Q14532 448 aa14.5□□□□□ -0.09
LRTOMT-206ENST00000427369 EPC1Q9H2F5 836 aa14.5□□□□□ -0.09
LRTOMT-206ENST00000427369 ZCCHC17Q9NP64 241 aaKnown RBP14.5□□□□□ -0.09
LRTOMT-206ENST00000427369 URI1O94763 535 aaPredicted RBP14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 CHGBP05060 677 aa14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 TPM4P67936 248 aa14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 CCDC129Q6ZRS4 1044 aa14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 SEC62Q99442 399 aaKnown RBP14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 FEZ2Q9UHY8 353 aaPredicted RBP14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 NRDCO43847 1150 aa14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 ETF1P62495 437 aaKnown RBP14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 CCT2P78371 535 aaKnown RBP14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 ZNF396Q96N95 335 aaPredicted RBP14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 LGR6Q9HBX8 967 aa14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 NDUFB9Q9Y6M9 179 aa14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 NSUN7Q8NE18 718 aaKnown RBP14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 SMARCC2Q8TAQ2 1214 aa14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 KLHDC4Q8TBB5 520 aa14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 CARD6Q9BX69 1037 aa14.49□□□□□ -0.09
LRTOMT-206ENST00000427369 PTPDC1A2A3K4 754 aa14.48□□□□□ -0.09
LRTOMT-206ENST00000427369 NAA16Q6N069 864 aaPredicted RBP14.48□□□□□ -0.09
LRTOMT-206ENST00000427369 SMARCE1Q969G3 411 aa14.48□□□□□ -0.09
LRTOMT-206ENST00000427369 COL15A1P39059 1388 aa14.48□□□□□ -0.09
LRTOMT-206ENST00000427369 KRBA2Q6ZNG9 492 aa14.48□□□□□ -0.09
LRTOMT-206ENST00000427369 FMR1NBQ8N0W7 255 aaPredicted RBP14.48□□□□□ -0.09
LRTOMT-206ENST00000427369 MRPS27Q92552 414 aaKnown RBP14.48□□□□□ -0.09
LRTOMT-206ENST00000427369 SUCLG2Q96I99 432 aa14.48□□□□□ -0.09
LRTOMT-206ENST00000427369 PCDHA7Q9UN72 937 aa14.48□□□□□ -0.09
LRTOMT-206ENST00000427369 TECPR2O15040 1411 aa14.48□□□□□ -0.09
LRTOMT-206ENST00000427369 CTDNEP1O95476 244 aa14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 FAM177A1Q8N128 213 aaPredicted RBP14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 BICC1Q9H694 974 aaKnown RBP14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 CYP21A2P08686 494 aa14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 NDUFA8P51970 172 aa14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 APOBRQ0VD83 1088 aa14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 USPL1Q5W0Q7 1092 aa14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 NGDNQ8NEJ9 315 aaKnown RBP14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 NCOA5Q9HCD5 579 aaKnown RBP14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 ALDH1L1O75891 902 aa14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 LMOD1P29536 600 aaPredicted RBP14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 HOXC9P31274 260 aa14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 ISM2Q6H9L7 571 aa14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 CCDC34Q96HJ3 373 aa14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 KIAA1468Q9P260 1216 aa14.47□□□□□ -0.09
LRTOMT-206ENST00000427369 FANCGO15287 622 aa14.46□□□□□ -0.09
LRTOMT-206ENST00000427369 TADA3O75528 432 aa14.46□□□□□ -0.09
LRTOMT-206ENST00000427369 SASH3O75995 380 aa14.46□□□□□ -0.09
LRTOMT-206ENST00000427369 OAS2P29728 719 aaKnown RBP14.46□□□□□ -0.09
LRTOMT-206ENST00000427369 NLRP6P59044 892 aa14.46□□□□□ -0.09
LRTOMT-206ENST00000427369 TXLNBQ8N3L3 684 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms