RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 PARP3Q9Y6F1 533 aa9.48□□□□□ -0.89
LINC01049-201ENST00000426840 C3orf80F5H4A9 247 aa9.47□□□□□ -0.89
LINC01049-201ENST00000426840 GPTP24298 496 aa9.47□□□□□ -0.89
LINC01049-201ENST00000426840 BRPF1P55201 1214 aaPredicted RBP9.47□□□□□ -0.89
LINC01049-201ENST00000426840 TRIM28Q13263 835 aaKnown RBP9.47□□□□□ -0.89
LINC01049-201ENST00000426840 SUSD4Q5VX71 490 aa9.47□□□□□ -0.89
LINC01049-201ENST00000426840 RIC3Q7Z5B4 369 aa9.47□□□□□ -0.89
LINC01049-201ENST00000426840 ISCA1Q9BUE6 129 aa9.47□□□□□ -0.89
LINC01049-201ENST00000426840 BCORQ6W2J9 1755 aa9.47□□□□□ -0.89
LINC01049-201ENST00000426840 LRP5O75197 1615 aa9.46□□□□□ -0.89
LINC01049-201ENST00000426840 SCN7AQ01118 1682 aa9.46□□□□□ -0.89
LINC01049-201ENST00000426840 DDX58O95786 925 aaKnown RBP9.46□□□□□ -0.9
LINC01049-201ENST00000426840 HSP90AB3PQ58FF7 597 aa9.46□□□□□ -0.9
LINC01049-201ENST00000426840 METTL22Q9BUU2 404 aaPredicted RBP9.46□□□□□ -0.9
LINC01049-201ENST00000426840 BCL2L13Q9BXK5 485 aa9.46□□□□□ -0.9
LINC01049-201ENST00000426840 PNMA3Q9UL41 463 aa9.46□□□□□ -0.9
LINC01049-201ENST00000426840 MAP3K2Q9Y2U5 619 aa9.46□□□□□ -0.9
LINC01049-201ENST00000426840 UBN2Q6ZU65 1347 aa9.46□□□□□ -0.9
LINC01049-201ENST00000426840 ADCY9O60503 1353 aa9.46□□□□□ -0.9
LINC01049-201ENST00000426840 ATP10DQ9P241 1426 aa9.46□□□□□ -0.9
LINC01049-201ENST00000426840 ATP5J2-PTCD1G3V325 749 aa9.45□□□□□ -0.9
LINC01049-201ENST00000426840 BCAR3O75815 825 aa9.45□□□□□ -0.9
LINC01049-201ENST00000426840 FKBP5Q13451 457 aaPredicted RBP9.45□□□□□ -0.9
LINC01049-201ENST00000426840 PARP10Q53GL7 1025 aa9.45□□□□□ -0.9
LINC01049-201ENST00000426840 PRR5LQ6MZQ0 368 aa9.45□□□□□ -0.9
LINC01049-201ENST00000426840 TPTE2Q6XPS3 522 aa9.45□□□□□ -0.9
LINC01049-201ENST00000426840 NLRP10Q86W26 655 aa9.45□□□□□ -0.9
LINC01049-201ENST00000426840 GPIHBP1Q8IV16 184 aa9.45□□□□□ -0.9
LINC01049-201ENST00000426840 DNAAF4Q8WXU2 420 aa9.45□□□□□ -0.9
LINC01049-201ENST00000426840 WNT2BQ93097 391 aa9.45□□□□□ -0.9
LINC01049-201ENST00000426840 MYD88Q99836 296 aa9.45□□□□□ -0.9
LINC01049-201ENST00000426840 SYT17Q9BSW7 474 aa9.45□□□□□ -0.9
LINC01049-201ENST00000426840 FHDC1Q9C0D6 1143 aaPredicted RBP9.45□□□□□ -0.9
LINC01049-201ENST00000426840 SMC4Q9NTJ3 1288 aa9.45□□□□□ -0.9
LINC01049-201ENST00000426840 PPP1R1BQ9UD71 204 aaPredicted RBP9.45□□□□□ -0.9
LINC01049-201ENST00000426840 CD2APQ9Y5K6 639 aa9.45□□□□□ -0.9
LINC01049-201ENST00000426840 AFDNP55196 1824 aaKnown RBP9.45□□□□□ -0.9
LINC01049-201ENST00000426840 FAM177BA6PVY3 158 aa9.44□□□□□ -0.9
LINC01049-201ENST00000426840 F6X3S4 739 aa9.44□□□□□ -0.9
LINC01049-201ENST00000426840 NTSR2O95665 410 aa9.44□□□□□ -0.9
LINC01049-201ENST00000426840 IGKV5-2P06315 115 aa9.44□□□□□ -0.9
LINC01049-201ENST00000426840 NUDT18Q6ZVK8 323 aa9.44□□□□□ -0.9
LINC01049-201ENST00000426840 CCDC24Q8N4L8 307 aa9.44□□□□□ -0.9
LINC01049-201ENST00000426840 NOB1Q9ULX3 412 aaKnown RBP9.44□□□□□ -0.9
LINC01049-201ENST00000426840 CARMIL3Q8ND23 1372 aa9.44□□□□□ -0.9
LINC01049-201ENST00000426840 NRXN2Q9P2S2 1712 aa9.44□□□□□ -0.9
LINC01049-201ENST00000426840 PTPRCP08575 1304 aa9.43□□□□□ -0.9
LINC01049-201ENST00000426840 FAM161AQ3B820 660 aa9.43□□□□□ -0.9
LINC01049-201ENST00000426840 SLC10A5Q5PT55 438 aa9.43□□□□□ -0.9
LINC01049-201ENST00000426840 BEND3Q5T5X7 828 aa9.43□□□□□ -0.9
LINC01049-201ENST00000426840 PPP1R42Q7Z4L9 355 aa9.43□□□□□ -0.9
LINC01049-201ENST00000426840 NBPF5PQ86XG9 351 aaPredicted RBP9.43□□□□□ -0.9
LINC01049-201ENST00000426840 SYNE4Q8N205 404 aa9.43□□□□□ -0.9
LINC01049-201ENST00000426840 CCDC191Q8NCU4 936 aa9.43□□□□□ -0.9
LINC01049-201ENST00000426840 TATDN2Q93075 761 aa9.43□□□□□ -0.9
LINC01049-201ENST00000426840 UTP14AQ9BVJ6 771 aaKnown RBP9.43□□□□□ -0.9
LINC01049-201ENST00000426840 BRIP1Q9BX63 1249 aa9.43□□□□□ -0.9
LINC01049-201ENST00000426840 ARFGEF2Q9Y6D5 1785 aa9.42□□□□□ -0.9
LINC01049-201ENST00000426840 NEURL1BA8MQ27 555 aa9.42□□□□□ -0.9
LINC01049-201ENST00000426840 KCNA3P22001 575 aa9.42□□□□□ -0.9
LINC01049-201ENST00000426840 TGFB2P61812 414 aa9.42□□□□□ -0.9
LINC01049-201ENST00000426840 CWF19L2Q2TBE0 894 aaKnown RBP9.42□□□□□ -0.9
LINC01049-201ENST00000426840 ERFEQ4G0M1 354 aa9.42□□□□□ -0.9
LINC01049-201ENST00000426840 NUTM1Q86Y26 1132 aa9.42□□□□□ -0.9
LINC01049-201ENST00000426840 CNBD1Q8NA66 436 aa9.42□□□□□ -0.9
LINC01049-201ENST00000426840 NLGN2Q8NFZ4 835 aa9.42□□□□□ -0.9
LINC01049-201ENST00000426840 LINS1Q8NG48 757 aa9.42□□□□□ -0.9
LINC01049-201ENST00000426840 ARHGAP45Q92619 1136 aa9.42□□□□□ -0.9
LINC01049-201ENST00000426840 NYXQ9GZU5 481 aa9.42□□□□□ -0.9
LINC01049-201ENST00000426840 RBM27Q9P2N5 1060 aaKnown RBP9.42□□□□□ -0.9
LINC01049-201ENST00000426840 C10orf71Q711Q0 1435 aa9.41□□□□□ -0.9
LINC01049-201ENST00000426840 IBTKQ9P2D0 1353 aaPredicted RBP9.41□□□□□ -0.9
LINC01049-201ENST00000426840 KIF13BQ9NQT8 1826 aa9.41□□□□□ -0.9
LINC01049-201ENST00000426840 A0A0G2JLW4 131 aa9.41□□□□□ -0.9
LINC01049-201ENST00000426840 KLRG2A4D1S0 409 aaPredicted RBP9.41□□□□□ -0.9
LINC01049-201ENST00000426840 H7C1W4 665 aa9.41□□□□□ -0.9
LINC01049-201ENST00000426840 DPEP1P16444 411 aa9.41□□□□□ -0.9
LINC01049-201ENST00000426840 FECHP22830 423 aa9.41□□□□□ -0.9
LINC01049-201ENST00000426840 GTF2E1P29083 439 aaPredicted RBP9.41□□□□□ -0.9
LINC01049-201ENST00000426840 PTPN5P54829 565 aa9.41□□□□□ -0.9
LINC01049-201ENST00000426840 NEXNQ0ZGT2 675 aa9.41□□□□□ -0.9
LINC01049-201ENST00000426840 JARID2Q92833 1246 aaPredicted RBP9.41□□□□□ -0.9
LINC01049-201ENST00000426840 FAM89AQ96GI7 184 aa9.41□□□□□ -0.9
LINC01049-201ENST00000426840 ZFRQ96KR1 1074 aaKnown RBP9.41□□□□□ -0.9
LINC01049-201ENST00000426840 CWC25Q9NXE8 425 aaPredicted RBP9.41□□□□□ -0.9
LINC01049-201ENST00000426840 TRMT112Q9UI30 125 aaKnown RBP9.41□□□□□ -0.9
LINC01049-201ENST00000426840 ANKRD36CQ5JPF3 1778 aa9.41□□□□□ -0.9
LINC01049-201ENST00000426840 RNF123Q5XPI4 1314 aa9.4□□□□□ -0.9
LINC01049-201ENST00000426840 SH3TC1Q8TE82 1336 aa9.4□□□□□ -0.9
LINC01049-201ENST00000426840 IPO8O15397 1037 aaKnown RBP9.4□□□□□ -0.9
LINC01049-201ENST00000426840 PCCAP05165 728 aaPredicted RBP9.4□□□□□ -0.9
LINC01049-201ENST00000426840 CHRNA5P30532 468 aa9.4□□□□□ -0.9
LINC01049-201ENST00000426840 ST5P78524 1137 aa9.4□□□□□ -0.9
LINC01049-201ENST00000426840 GCKRQ14397 625 aa9.4□□□□□ -0.9
LINC01049-201ENST00000426840 SLC4A10Q6U841 1118 aa9.4□□□□□ -0.9
LINC01049-201ENST00000426840 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.4□□□□□ -0.9
LINC01049-201ENST00000426840 LAPTM4BQ86VI4 370 aa9.4□□□□□ -0.9
LINC01049-201ENST00000426840 ZBTB38Q8NAP3 1195 aaPredicted RBP9.4□□□□□ -0.9
LINC01049-201ENST00000426840 TTC13Q8NBP0 860 aa9.4□□□□□ -0.9
LINC01049-201ENST00000426840 ANKK1Q8NFD2 765 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms