RNA–Protein interactions for RNA: ENST00000426713.1

LINC00116-202, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LINC00116, Length 461 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-202ENST00000426713 ATP5J2-PTCD1G3V325 749 aa19.62■□□□□ 0.73
LINC00116-202ENST00000426713 SLC10A3P09131 477 aa19.62■□□□□ 0.73
LINC00116-202ENST00000426713 CDCA5Q96FF9 252 aa19.62■□□□□ 0.73
LINC00116-202ENST00000426713 CSRNP1Q96S65 589 aa19.62■□□□□ 0.73
LINC00116-202ENST00000426713 ZC3H12CQ9C0D7 883 aaKnown RBP19.62■□□□□ 0.73
LINC00116-202ENST00000426713 LAS1LQ9Y4W2 734 aaKnown RBP19.62■□□□□ 0.73
LINC00116-202ENST00000426713 LMOD3Q0VAK6 560 aa19.61■□□□□ 0.73
LINC00116-202ENST00000426713 CHPF2Q9P2E5 772 aa19.61■□□□□ 0.73
LINC00116-202ENST00000426713 ASTN2O75129 1339 aaPredicted RBP19.6■□□□□ 0.73
LINC00116-202ENST00000426713 KRT24Q2M2I5 525 aa19.6■□□□□ 0.73
LINC00116-202ENST00000426713 TBC1D16Q8TBP0 767 aa19.6■□□□□ 0.73
LINC00116-202ENST00000426713 BABAM1Q9NWV8 329 aa19.6■□□□□ 0.73
LINC00116-202ENST00000426713 SF3B3Q15393 1217 aaKnown RBP19.59■□□□□ 0.73
LINC00116-202ENST00000426713 NEUROD2Q15784 382 aa19.59■□□□□ 0.73
LINC00116-202ENST00000426713 ANGEL2Q5VTE6 544 aaKnown RBP19.59■□□□□ 0.73
LINC00116-202ENST00000426713 ANKRD13DQ6ZTN6 518 aa19.59■□□□□ 0.73
LINC00116-202ENST00000426713 PLBD2Q8NHP8 589 aa19.59■□□□□ 0.73
LINC00116-202ENST00000426713 ANKIB1Q9P2G1 1089 aa19.59■□□□□ 0.73
LINC00116-202ENST00000426713 HDAC9Q9UKV0 1011 aa19.59■□□□□ 0.73
LINC00116-202ENST00000426713 SCN9AQ15858 1988 aa19.58■□□□□ 0.73
LINC00116-202ENST00000426713 UFL1O94874 794 aa19.58■□□□□ 0.72
LINC00116-202ENST00000426713 RPS8P62241 208 aaKnown RBP19.58■□□□□ 0.72
LINC00116-202ENST00000426713 HDGFL1Q5TGJ6 251 aa19.58■□□□□ 0.72
LINC00116-202ENST00000426713 PRPF38BQ5VTL8 546 aaKnown RBP19.58■□□□□ 0.72
LINC00116-202ENST00000426713 IRS4O14654 1257 aaPredicted RBP19.57■□□□□ 0.72
LINC00116-202ENST00000426713 VIL1P09327 827 aaKnown RBP19.57■□□□□ 0.72
LINC00116-202ENST00000426713 TMPOP42166 694 aaKnown RBP19.57■□□□□ 0.72
LINC00116-202ENST00000426713 SCARF1Q14162 830 aa19.57■□□□□ 0.72
LINC00116-202ENST00000426713 RASAL3Q86YV0 1011 aa19.57■□□□□ 0.72
LINC00116-202ENST00000426713 REM2Q8IYK8 340 aaPredicted RBP19.57■□□□□ 0.72
LINC00116-202ENST00000426713 COL4A1P02462 1669 aa19.56■□□□□ 0.72
LINC00116-202ENST00000426713 ISCA1Q9BUE6 129 aa19.56■□□□□ 0.72
LINC00116-202ENST00000426713 HPS5Q9UPZ3 1129 aa19.56■□□□□ 0.72
LINC00116-202ENST00000426713 TTLL12Q14166 644 aaPredicted RBP19.55■□□□□ 0.72
LINC00116-202ENST00000426713 GGA1Q9UJY5 639 aa19.55■□□□□ 0.72
LINC00116-202ENST00000426713 SCAF8Q9UPN6 1271 aaKnown RBP19.55■□□□□ 0.72
LINC00116-202ENST00000426713 TBC1D8O95759 1140 aa19.54■□□□□ 0.72
LINC00116-202ENST00000426713 MOB2Q70IA6 237 aa19.54■□□□□ 0.72
LINC00116-202ENST00000426713 DBF4Q9UBU7 674 aaPredicted RBP19.54■□□□□ 0.72
LINC00116-202ENST00000426713 FKBP1BP68106 108 aa19.53■□□□□ 0.72
LINC00116-202ENST00000426713 RSBN1LQ6PCB5 846 aaPredicted RBP19.53■□□□□ 0.72
LINC00116-202ENST00000426713 CCDC146Q8IYE0 955 aa19.53■□□□□ 0.72
LINC00116-202ENST00000426713 AGBL3Q8NEM8 1001 aa19.53■□□□□ 0.72
LINC00116-202ENST00000426713 SEC31BQ9NQW1 1179 aa19.53■□□□□ 0.72
LINC00116-202ENST00000426713 PAPPA2Q9BXP8 1791 aa19.52■□□□□ 0.72
LINC00116-202ENST00000426713 USP17L8P0C7I0 530 aa19.52■□□□□ 0.72
LINC00116-202ENST00000426713 ZNF280AP59817 542 aaPredicted RBP19.52■□□□□ 0.72
LINC00116-202ENST00000426713 PKN2Q16513 984 aaKnown RBP19.52■□□□□ 0.72
LINC00116-202ENST00000426713 RIC3Q7Z5B4 369 aa19.52■□□□□ 0.72
LINC00116-202ENST00000426713 CCDC85AQ96PX6 553 aaPredicted RBP19.52■□□□□ 0.72
LINC00116-202ENST00000426713 MYOZ2Q9NPC6 264 aa19.52■□□□□ 0.72
LINC00116-202ENST00000426713 UBE2Q2LH0YL09 131 aa19.51■□□□□ 0.71
LINC00116-202ENST00000426713 CHL1O00533 1208 aa19.51■□□□□ 0.71
LINC00116-202ENST00000426713 MKRN3Q13064 507 aaKnown RBP19.51■□□□□ 0.71
LINC00116-202ENST00000426713 PRAMEF18Q5VWM3 479 aa19.51■□□□□ 0.71
LINC00116-202ENST00000426713 ZNF296Q8WUU4 475 aaPredicted RBP19.51■□□□□ 0.71
LINC00116-202ENST00000426713 HYPKQ9NX55 129 aa19.51■□□□□ 0.71
LINC00116-202ENST00000426713 PODXL2Q9NZ53 605 aa19.51■□□□□ 0.71
LINC00116-202ENST00000426713 HSP90B1P14625 803 aaKnown RBP19.5■□□□□ 0.71
LINC00116-202ENST00000426713 GOLGA2Q08379 1002 aa19.49■□□□□ 0.71
LINC00116-202ENST00000426713 CCDC152Q4G0S7 254 aa19.49■□□□□ 0.71
LINC00116-202ENST00000426713 ZBTB38Q8NAP3 1195 aaPredicted RBP19.49■□□□□ 0.71
LINC00116-202ENST00000426713 FBXW7Q969H0 707 aa19.49■□□□□ 0.71
LINC00116-202ENST00000426713 USP17L3A6NCW0 530 aa19.48■□□□□ 0.71
LINC00116-202ENST00000426713 USP17L4A6NCW7 530 aa19.48■□□□□ 0.71
LINC00116-202ENST00000426713 NF2P35240 595 aa19.48■□□□□ 0.71
LINC00116-202ENST00000426713 USP17L1Q7RTZ2 530 aa19.48■□□□□ 0.71
LINC00116-202ENST00000426713 JARID2Q92833 1246 aaPredicted RBP19.48■□□□□ 0.71
LINC00116-202ENST00000426713 PSME4Q14997 1843 aa19.48■□□□□ 0.71
LINC00116-202ENST00000426713 PITPNM2Q9BZ72 1349 aa19.48■□□□□ 0.71
LINC00116-202ENST00000426713 HOXB7P09629 217 aa19.47■□□□□ 0.71
LINC00116-202ENST00000426713 TRIM28Q13263 835 aaKnown RBP19.47■□□□□ 0.71
LINC00116-202ENST00000426713 DUSP27Q5VZP5 1158 aa19.47■□□□□ 0.71
LINC00116-202ENST00000426713 MYD88Q99836 296 aa19.47■□□□□ 0.71
LINC00116-202ENST00000426713 XDHP47989 1333 aa19.47■□□□□ 0.71
LINC00116-202ENST00000426713 GPR25O00155 361 aa19.46■□□□□ 0.71
LINC00116-202ENST00000426713 NBPF9Q3BBW0 867 aa19.46■□□□□ 0.71
LINC00116-202ENST00000426713 ANKRD18AQ8IVF6 992 aa19.46■□□□□ 0.71
LINC00116-202ENST00000426713 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.46■□□□□ 0.71
LINC00116-202ENST00000426713 ATP2B4P23634 1241 aa19.45■□□□□ 0.7
LINC00116-202ENST00000426713 PRKG1Q13976 671 aa19.45■□□□□ 0.7
LINC00116-202ENST00000426713 PODNQ7Z5L7 613 aa19.45■□□□□ 0.7
LINC00116-202ENST00000426713 OGFOD1Q8N543 542 aa19.45■□□□□ 0.7
LINC00116-202ENST00000426713 ZNF609O15014 1411 aa19.44■□□□□ 0.7
LINC00116-202ENST00000426713 PDE8AO60658 829 aa19.44■□□□□ 0.7
LINC00116-202ENST00000426713 SREBF2Q12772 1141 aa19.44■□□□□ 0.7
LINC00116-202ENST00000426713 FBXO46Q6PJ61 603 aaPredicted RBP19.44■□□□□ 0.7
LINC00116-202ENST00000426713 GMLQ99445 158 aa19.44■□□□□ 0.7
LINC00116-202ENST00000426713 TRIM35Q9UPQ4 493 aa19.44■□□□□ 0.7
LINC00116-202ENST00000426713 FKTNO75072 461 aa19.43■□□□□ 0.7
LINC00116-202ENST00000426713 MXD3Q9BW11 206 aa19.43■□□□□ 0.7
LINC00116-202ENST00000426713 PHAXQ9H814 394 aaKnown RBP19.43■□□□□ 0.7
LINC00116-202ENST00000426713 PCCAP05165 728 aaPredicted RBP19.42■□□□□ 0.7
LINC00116-202ENST00000426713 TM4SF4P48230 202 aa19.42■□□□□ 0.7
LINC00116-202ENST00000426713 WDR43Q15061 677 aaKnown RBP eCLIP19.42■□□□□ 0.7
LINC00116-202ENST00000426713 RUNDC1Q96C34 613 aa19.42■□□□□ 0.7
LINC00116-202ENST00000426713 CWC25Q9NXE8 425 aaPredicted RBP19.42■□□□□ 0.7
LINC00116-202ENST00000426713 SPEF2Q9C093 1822 aa19.41■□□□□ 0.7
LINC00116-202ENST00000426713 ELL2O00472 640 aaPredicted RBP19.41■□□□□ 0.7
LINC00116-202ENST00000426713 SASH1O94885 1247 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms