RNA–Protein interactions for RNA: ENST00000426511.5

SEMA3F-205, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-205ENST00000426511 ZC3H12CQ9C0D7 883 aaKnown RBP28.05■■■□□ 2.08
SEMA3F-205ENST00000426511 GPRC5DQ9NZD1 345 aa28.04■■■□□ 2.08
SEMA3F-205ENST00000426511 ECE2O60344 883 aa28.03■■■□□ 2.08
SEMA3F-205ENST00000426511 BEND3Q5T5X7 828 aa28.03■■■□□ 2.08
SEMA3F-205ENST00000426511 CNTROBQ8N137 903 aa28.03■■■□□ 2.08
SEMA3F-205ENST00000426511 PODXL2Q9NZ53 605 aa28.03■■■□□ 2.08
SEMA3F-205ENST00000426511 SPEF2Q9C093 1822 aa28.03■■■□□ 2.08
SEMA3F-205ENST00000426511 ADAMTSL1Q8N6G6 1762 aa28.03■■■□□ 2.08
SEMA3F-205ENST00000426511 XDHP47989 1333 aa28.01■■■□□ 2.07
SEMA3F-205ENST00000426511 CASP7P55210 303 aa28.01■■■□□ 2.07
SEMA3F-205ENST00000426511 FAM161AQ3B820 660 aa28.01■■■□□ 2.07
SEMA3F-205ENST00000426511 USP50Q70EL3 339 aaPredicted RBP28.01■■■□□ 2.07
SEMA3F-205ENST00000426511 ADARB2Q9NS39 739 aaKnown RBP28.01■■■□□ 2.07
SEMA3F-205ENST00000426511 ZBTB12Q9Y330 459 aaPredicted RBP28.01■■■□□ 2.07
SEMA3F-205ENST00000426511 ITGBL1O95965 494 aaPredicted RBP28■■■□□ 2.07
SEMA3F-205ENST00000426511 ITGA6P23229 1130 aa28■■■□□ 2.07
SEMA3F-205ENST00000426511 IGHMBP2P38935 993 aaKnown RBP28■■■□□ 2.07
SEMA3F-205ENST00000426511 SLFN5Q08AF3 891 aa28■■■□□ 2.07
SEMA3F-205ENST00000426511 CDCA7LQ96GN5 454 aa28■■■□□ 2.07
SEMA3F-205ENST00000426511 PLA2G12BQ9BX93 195 aa28■■■□□ 2.07
SEMA3F-205ENST00000426511 CHMP3Q9Y3E7 222 aa28■■■□□ 2.07
SEMA3F-205ENST00000426511 RTL9Q8NET4 1388 aa27.99■■■□□ 2.07
SEMA3F-205ENST00000426511 PASKQ96RG2 1323 aa27.99■■■□□ 2.07
SEMA3F-205ENST00000426511 PSMD14O00487 310 aa27.99■■■□□ 2.07
SEMA3F-205ENST00000426511 KCNQ5Q9NR82 932 aa27.99■■■□□ 2.07
SEMA3F-205ENST00000426511 CREBZFQ9NS37 354 aa27.99■■■□□ 2.07
SEMA3F-205ENST00000426511 BSDC1Q9NW68 430 aaPredicted RBP27.99■■■□□ 2.07
SEMA3F-205ENST00000426511 MINPP1Q9UNW1 487 aa27.98■■■□□ 2.07
SEMA3F-205ENST00000426511 ATP2B4P23634 1241 aa27.97■■■□□ 2.07
SEMA3F-205ENST00000426511 MPHOSPH8Q99549 860 aa27.97■■■□□ 2.07
SEMA3F-205ENST00000426511 C9orf78Q9NZ63 289 aaPredicted RBP27.97■■■□□ 2.07
SEMA3F-205ENST00000426511 MKRN1Q9UHC7 482 aaKnown RBP27.97■■■□□ 2.07
SEMA3F-205ENST00000426511 CNOT7Q9UIV1 285 aaKnown RBP27.97■■■□□ 2.07
SEMA3F-205ENST00000426511 SHTN1A0MZ66 631 aa27.96■■■□□ 2.07
SEMA3F-205ENST00000426511 MICALL2Q8IY33 904 aa27.96■■■□□ 2.07
SEMA3F-205ENST00000426511 MRPL50Q8N5N7 158 aaKnown RBP27.96■■■□□ 2.07
SEMA3F-205ENST00000426511 SRCIN1Q9C0H9 1055 aa27.96■■■□□ 2.07
SEMA3F-205ENST00000426511 TMEM88BA6NKF7 163 aa27.95■■■□□ 2.06
SEMA3F-205ENST00000426511 H7C1D1 291 aa27.95■■■□□ 2.06
SEMA3F-205ENST00000426511 GRM8O00222 908 aa27.95■■■□□ 2.06
SEMA3F-205ENST00000426511 ANKRD18BA2A2Z9 1011 aa27.94■■■□□ 2.06
SEMA3F-205ENST00000426511 WTIPA6NIX2 430 aaPredicted RBP27.94■■■□□ 2.06
SEMA3F-205ENST00000426511 CSF1RP07333 972 aa27.94■■■□□ 2.06
SEMA3F-205ENST00000426511 SSH1Q8WYL5 1049 aa27.94■■■□□ 2.06
SEMA3F-205ENST00000426511 ALDH1L1O75891 902 aa27.93■■■□□ 2.06
SEMA3F-205ENST00000426511 TRPM4Q8TD43 1214 aa27.93■■■□□ 2.06
SEMA3F-205ENST00000426511 CCT4P50991 539 aaKnown RBP27.92■■■□□ 2.06
SEMA3F-205ENST00000426511 FOXO4P98177 505 aa27.92■■■□□ 2.06
SEMA3F-205ENST00000426511 FMR1Q06787 632 aaKnown RBP eCLIP27.92■■■□□ 2.06
SEMA3F-205ENST00000426511 JMYQ8N9B5 988 aa27.92■■■□□ 2.06
SEMA3F-205ENST00000426511 TRAF5O00463 557 aa27.91■■■□□ 2.06
SEMA3F-205ENST00000426511 IFIT5Q13325 482 aaKnown RBP27.91■■■□□ 2.06
SEMA3F-205ENST00000426511 LMBR1LQ6UX01 489 aa27.91■■■□□ 2.06
SEMA3F-205ENST00000426511 EPHA10Q5JZY3 1008 aa27.9■■■□□ 2.06
SEMA3F-205ENST00000426511 RBM26Q5T8P6 1007 aaKnown RBP27.9■■■□□ 2.06
SEMA3F-205ENST00000426511 DPF2Q92785 391 aa27.9■■■□□ 2.06
SEMA3F-205ENST00000426511 RPS12P25398 132 aaKnown RBP27.89■■■□□ 2.06
SEMA3F-205ENST00000426511 KCNJ4P48050 445 aa27.89■■■□□ 2.06
SEMA3F-205ENST00000426511 HIRAP54198 1017 aaPredicted RBP27.89■■■□□ 2.06
SEMA3F-205ENST00000426511 TBC1D10BQ4KMP7 808 aaPredicted RBP27.89■■■□□ 2.06
SEMA3F-205ENST00000426511 TAF7LQ5H9L4 462 aa27.89■■■□□ 2.06
SEMA3F-205ENST00000426511 DIEXFQ68CQ4 756 aaKnown RBP27.89■■■□□ 2.06
SEMA3F-205ENST00000426511 SAMD7Q7Z3H4 446 aa27.89■■■□□ 2.06
SEMA3F-205ENST00000426511 ANKRD2Q9GZV1 360 aa27.89■■■□□ 2.06
SEMA3F-205ENST00000426511 SMC4Q9NTJ3 1288 aa27.89■■■□□ 2.06
SEMA3F-205ENST00000426511 ABT1Q9ULW3 272 aaKnown RBP27.89■■■□□ 2.06
SEMA3F-205ENST00000426511 SCN9AQ15858 1988 aa27.88■■■□□ 2.05
SEMA3F-205ENST00000426511 FBXW7Q969H0 707 aa27.88■■■□□ 2.05
SEMA3F-205ENST00000426511 PTPRCP08575 1304 aa27.88■■■□□ 2.05
SEMA3F-205ENST00000426511 MED23Q9ULK4 1368 aa27.87■■■□□ 2.05
SEMA3F-205ENST00000426511 CHRNDQ07001 517 aa27.87■■■□□ 2.05
SEMA3F-205ENST00000426511 CCDC57Q2TAC2 916 aa27.87■■■□□ 2.05
SEMA3F-205ENST00000426511 LEMD3Q9Y2U8 911 aa27.87■■■□□ 2.05
SEMA3F-205ENST00000426511 VIL1P09327 827 aaKnown RBP27.86■■■□□ 2.05
SEMA3F-205ENST00000426511 MIER1Q8N108 512 aa27.86■■■□□ 2.05
SEMA3F-205ENST00000426511 SUCLG2Q96I99 432 aa27.86■■■□□ 2.05
SEMA3F-205ENST00000426511 GLIS2Q9BZE0 524 aaPredicted RBP27.86■■■□□ 2.05
SEMA3F-205ENST00000426511 ZNF804BA4D1E1 1349 aa27.86■■■□□ 2.05
SEMA3F-205ENST00000426511 CNTNAP1P78357 1384 aa27.86■■■□□ 2.05
SEMA3F-205ENST00000426511 HELBQ8NG08 1087 aaPredicted RBP27.85■■■□□ 2.05
SEMA3F-205ENST00000426511 ZNF594Q96JF6 807 aaPredicted RBP27.85■■■□□ 2.05
SEMA3F-205ENST00000426511 EGFRP00533 1210 aa27.84■■■□□ 2.05
SEMA3F-205ENST00000426511 NBPF7P0C2Y1 421 aaPredicted RBP27.84■■■□□ 2.05
SEMA3F-205ENST00000426511 KLRK1P26718 216 aa27.84■■■□□ 2.05
SEMA3F-205ENST00000426511 ALDH1L2Q3SY69 923 aa27.84■■■□□ 2.05
SEMA3F-205ENST00000426511 RSBN1LQ6PCB5 846 aaPredicted RBP27.84■■■□□ 2.05
SEMA3F-205ENST00000426511 PODNQ7Z5L7 613 aa27.84■■■□□ 2.05
SEMA3F-205ENST00000426511 TRMT2AQ8IZ69 625 aaKnown RBP27.84■■■□□ 2.05
SEMA3F-205ENST00000426511 USP17L3A6NCW0 530 aa27.83■■■□□ 2.05
SEMA3F-205ENST00000426511 USP17L4A6NCW7 530 aa27.83■■■□□ 2.05
SEMA3F-205ENST00000426511 TAF5LO75529 589 aa27.83■■■□□ 2.05
SEMA3F-205ENST00000426511 USP17L1Q7RTZ2 530 aa27.83■■■□□ 2.05
SEMA3F-205ENST00000426511 TXNRD3Q86VQ6 643 aa27.83■■■□□ 2.05
SEMA3F-205ENST00000426511 ZC3H15Q8WU90 426 aaKnown RBP27.83■■■□□ 2.05
SEMA3F-205ENST00000426511 ZNF408Q9H9D4 720 aa27.83■■■□□ 2.05
SEMA3F-205ENST00000426511 PLIN1O60240 522 aa27.82■■■□□ 2.04
SEMA3F-205ENST00000426511 KIF4BQ2VIQ3 1234 aa27.82■■■□□ 2.04
SEMA3F-205ENST00000426511 PAXIP1Q6ZW49 1069 aaPredicted RBP27.82■■■□□ 2.04
SEMA3F-205ENST00000426511 CNNM1Q9NRU3 951 aa27.82■■■□□ 2.04
SEMA3F-205ENST00000426511 SNAP23O00161 211 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms