RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 LRRC4BQ9NT99 713 aa17.45■□□□□ 0.38
CDK3-201ENST00000425876 MROH5Q6ZUA9 1318 aa17.45■□□□□ 0.38
CDK3-201ENST00000425876 FAM177BA6PVY3 158 aa17.45■□□□□ 0.38
CDK3-201ENST00000425876 SF3B3Q15393 1217 aaKnown RBP17.45■□□□□ 0.38
CDK3-201ENST00000425876 EZH2Q15910 746 aaKnown RBP17.45■□□□□ 0.38
CDK3-201ENST00000425876 TRAPPC3LQ5T215 181 aa17.45■□□□□ 0.38
CDK3-201ENST00000425876 TBC1D9BQ66K14 1250 aa17.45■□□□□ 0.38
CDK3-201ENST00000425876 KIAA1211Q6ZU35 1233 aa17.45■□□□□ 0.38
CDK3-201ENST00000425876 SETDB2Q96T68 719 aa17.45■□□□□ 0.38
CDK3-201ENST00000425876 FSD1Q9BTV5 496 aa17.45■□□□□ 0.38
CDK3-201ENST00000425876 LSG1Q9H089 658 aaKnown RBP17.45■□□□□ 0.38
CDK3-201ENST00000425876 CCDC158Q5M9N0 1113 aa17.44■□□□□ 0.38
CDK3-201ENST00000425876 COL24A1Q17RW2 1714 aa17.44■□□□□ 0.38
CDK3-201ENST00000425876 SPEF2Q9C093 1822 aa17.43■□□□□ 0.38
CDK3-201ENST00000425876 PDE8BO95263 885 aa17.43■□□□□ 0.38
CDK3-201ENST00000425876 HSPA4P34932 840 aa17.43■□□□□ 0.38
CDK3-201ENST00000425876 ATP2B3Q16720 1220 aa17.43■□□□□ 0.38
CDK3-201ENST00000425876 XAGE2Q96GT9 111 aa17.43■□□□□ 0.38
CDK3-201ENST00000425876 CAMKK2Q96RR4 588 aa17.43■□□□□ 0.38
CDK3-201ENST00000425876 SRP68Q9UHB9 627 aaKnown RBP17.43■□□□□ 0.38
CDK3-201ENST00000425876 RFC4P35249 363 aa17.42■□□□□ 0.38
CDK3-201ENST00000425876 ERFEQ4G0M1 354 aa17.42■□□□□ 0.38
CDK3-201ENST00000425876 AMIGO3Q86WK7 504 aa17.42■□□□□ 0.38
CDK3-201ENST00000425876 KBTBD3Q8NAB2 608 aa17.42■□□□□ 0.38
CDK3-201ENST00000425876 ZNF512BQ96KM6 892 aaPredicted RBP17.42■□□□□ 0.38
CDK3-201ENST00000425876 SRCAPQ6ZRS2 3230 aa17.42■□□□□ 0.38
CDK3-201ENST00000425876 IFIT1P09914 478 aaKnown RBP17.41■□□□□ 0.38
CDK3-201ENST00000425876 NMIQ13287 307 aaPredicted RBP17.41■□□□□ 0.38
CDK3-201ENST00000425876 CDC5LQ99459 802 aaKnown RBP17.41■□□□□ 0.38
CDK3-201ENST00000425876 MPHOSPH8Q99549 860 aa17.41■□□□□ 0.38
CDK3-201ENST00000425876 ANP32EQ9BTT0 268 aa17.41■□□□□ 0.38
CDK3-201ENST00000425876 C4AP0C0L4 1744 aa17.41■□□□□ 0.38
CDK3-201ENST00000425876 K7ELQ4 463 aaPredicted RBP17.4■□□□□ 0.38
CDK3-201ENST00000425876 ST18O60284 1047 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 SSFA2P28290 1259 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 IGHMBP2P38935 993 aaKnown RBP17.4■□□□□ 0.38
CDK3-201ENST00000425876 GORABQ5T7V8 394 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 TPTE2Q6XPS3 522 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 SMIM5Q71RC9 77 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 DNAJC2Q99543 621 aaKnown RBP17.4■□□□□ 0.38
CDK3-201ENST00000425876 PAG1Q9NWQ8 432 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 MED23Q9ULK4 1368 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 PLSCR1O15162 318 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 FGFR2P21802 821 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 ADORA1P30542 326 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 PUM3Q15397 648 aaKnown RBP17.4■□□□□ 0.38
CDK3-201ENST00000425876 TTC39AQ5SRH9 613 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 NBPF5PQ86XG9 351 aaPredicted RBP17.4■□□□□ 0.38
CDK3-201ENST00000425876 LPIN2Q92539 896 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 EDC3Q96F86 508 aaKnown RBP17.4■□□□□ 0.38
CDK3-201ENST00000425876 FAM227BQ96M60 508 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 ANTXR1Q9H6X2 564 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 SEC31BQ9NQW1 1179 aa17.4■□□□□ 0.38
CDK3-201ENST00000425876 GTF2E1P29083 439 aaPredicted RBP17.39■□□□□ 0.37
CDK3-201ENST00000425876 BICDL1Q6ZP65 573 aa17.39■□□□□ 0.37
CDK3-201ENST00000425876 CCDC171Q6TFL3 1326 aa17.39■□□□□ 0.37
CDK3-201ENST00000425876 UBR3Q6ZT12 1888 aa17.38■□□□□ 0.37
CDK3-201ENST00000425876 A0A0D9SFI3 127 aa17.38■□□□□ 0.37
CDK3-201ENST00000425876 CD2BP2O95400 341 aaKnown RBP17.38■□□□□ 0.37
CDK3-201ENST00000425876 LRRFIP1Q32MZ4 808 aaKnown RBP17.38■□□□□ 0.37
CDK3-201ENST00000425876 KCNB2Q92953 911 aa17.38■□□□□ 0.37
CDK3-201ENST00000425876 PALD1Q9ULE6 856 aa17.38■□□□□ 0.37
CDK3-201ENST00000425876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.37■□□□□ 0.37
CDK3-201ENST00000425876 GOLIM4O00461 696 aa17.37■□□□□ 0.37
CDK3-201ENST00000425876 TXNRD1Q16881 649 aa17.37■□□□□ 0.37
CDK3-201ENST00000425876 DDX46Q7L014 1031 aaKnown RBP17.37■□□□□ 0.37
CDK3-201ENST00000425876 MAP4K1Q92918 833 aa17.37■□□□□ 0.37
CDK3-201ENST00000425876 NLRP3Q96P20 1036 aa17.37■□□□□ 0.37
CDK3-201ENST00000425876 CARMIL3Q8ND23 1372 aa17.37■□□□□ 0.37
CDK3-201ENST00000425876 SLC5A1P13866 664 aa17.36■□□□□ 0.37
CDK3-201ENST00000425876 MCM2P49736 904 aa17.36■□□□□ 0.37
CDK3-201ENST00000425876 ARAP2Q8WZ64 1704 aa17.36■□□□□ 0.37
CDK3-201ENST00000425876 PHF14O94880 888 aa17.36■□□□□ 0.37
CDK3-201ENST00000425876 UQCRFS1P1P0C7P4 283 aa17.36■□□□□ 0.37
CDK3-201ENST00000425876 PTH1RQ03431 593 aa17.36■□□□□ 0.37
CDK3-201ENST00000425876 C3orf67Q6ZVT6 689 aa17.36■□□□□ 0.37
CDK3-201ENST00000425876 ANKRD18AQ8IVF6 992 aa17.36■□□□□ 0.37
CDK3-201ENST00000425876 PROM2Q8N271 834 aa17.36■□□□□ 0.37
CDK3-201ENST00000425876 HELLSQ9NRZ9 838 aa17.36■□□□□ 0.37
CDK3-201ENST00000425876 BSDC1Q9NW68 430 aaPredicted RBP17.36■□□□□ 0.37
CDK3-201ENST00000425876 NDUFB9Q9Y6M9 179 aa17.36■□□□□ 0.37
CDK3-201ENST00000425876 ZFYP08048 801 aaPredicted RBP17.35■□□□□ 0.37
CDK3-201ENST00000425876 ARID4AP29374 1257 aaPredicted RBP17.35■□□□□ 0.37
CDK3-201ENST00000425876 NFIXQ14938 502 aa17.35■□□□□ 0.37
CDK3-201ENST00000425876 NECTIN1Q15223 517 aa17.35■□□□□ 0.37
CDK3-201ENST00000425876 MCMDC2Q4G0Z9 681 aa17.35■□□□□ 0.37
CDK3-201ENST00000425876 SNX14Q9Y5W7 946 aa17.35■□□□□ 0.37
CDK3-201ENST00000425876 TAF5LO75529 589 aa17.34■□□□□ 0.37
CDK3-201ENST00000425876 NEK4P51957 841 aa17.34■□□□□ 0.37
CDK3-201ENST00000425876 ZMYM1Q5SVZ6 1142 aa17.34■□□□□ 0.37
CDK3-201ENST00000425876 SLKQ9H2G2 1235 aaPredicted RBP17.34■□□□□ 0.37
CDK3-201ENST00000425876 RNF113AO15541 343 aaKnown RBP17.33■□□□□ 0.37
CDK3-201ENST00000425876 GYS1P13807 737 aa17.33■□□□□ 0.37
CDK3-201ENST00000425876 CHRNDQ07001 517 aa17.33■□□□□ 0.37
CDK3-201ENST00000425876 CCDC102BQ68D86 513 aa17.33■□□□□ 0.37
CDK3-201ENST00000425876 TM6SF1Q9BZW5 370 aa17.33■□□□□ 0.37
CDK3-201ENST00000425876 RBM8AQ9Y5S9 174 aaKnown RBP17.33■□□□□ 0.37
CDK3-201ENST00000425876 DDIT3P35638 169 aa17.32■□□□□ 0.36
CDK3-201ENST00000425876 FKBP4Q02790 459 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDK3-201ENST00000425876 SCARF1Q14162 830 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms