RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 ITGA6P23229 1130 aa23.3■■□□□ 1.32
SMARCAL1-205ENST00000425815 DOK7Q18PE1 504 aa23.3■■□□□ 1.32
SMARCAL1-205ENST00000425815 FAM161AQ3B820 660 aa23.3■■□□□ 1.32
SMARCAL1-205ENST00000425815 EPHA10Q5JZY3 1008 aa23.3■■□□□ 1.32
SMARCAL1-205ENST00000425815 SLC4A10Q6U841 1118 aa23.3■■□□□ 1.32
SMARCAL1-205ENST00000425815 PNMA8AQ86V59 439 aaPredicted RBP23.3■■□□□ 1.32
SMARCAL1-205ENST00000425815 EYA3Q99504 573 aa23.3■■□□□ 1.32
SMARCAL1-205ENST00000425815 GGA1Q9UJY5 639 aa23.3■■□□□ 1.32
SMARCAL1-205ENST00000425815 LTBP1Q14766 1721 aa23.3■■□□□ 1.32
SMARCAL1-205ENST00000425815 ALDH1L1O75891 902 aa23.29■■□□□ 1.32
SMARCAL1-205ENST00000425815 UFL1O94874 794 aa23.29■■□□□ 1.32
SMARCAL1-205ENST00000425815 GMPSP49915 693 aaPredicted RBP23.29■■□□□ 1.32
SMARCAL1-205ENST00000425815 GPRC5DQ9NZD1 345 aa23.29■■□□□ 1.32
SMARCAL1-205ENST00000425815 SCN4AP35499 1836 aa23.29■■□□□ 1.32
SMARCAL1-205ENST00000425815 GRM8O00222 908 aa23.28■■□□□ 1.32
SMARCAL1-205ENST00000425815 BCL2L13Q9BXK5 485 aa23.28■■□□□ 1.32
SMARCAL1-205ENST00000425815 ZC3H12CQ9C0D7 883 aaKnown RBP23.28■■□□□ 1.32
SMARCAL1-205ENST00000425815 SRCIN1Q9C0H9 1055 aa23.28■■□□□ 1.32
SMARCAL1-205ENST00000425815 CACNA1FO60840 1977 aa23.28■■□□□ 1.32
SMARCAL1-205ENST00000425815 PASKQ96RG2 1323 aa23.28■■□□□ 1.32
SMARCAL1-205ENST00000425815 ECE2O60344 883 aa23.27■■□□□ 1.32
SMARCAL1-205ENST00000425815 LMOD1P29536 600 aaPredicted RBP23.27■■□□□ 1.32
SMARCAL1-205ENST00000425815 TNIP1Q15025 636 aa23.27■■□□□ 1.32
SMARCAL1-205ENST00000425815 CLEC11AQ9Y240 323 aa23.27■■□□□ 1.32
SMARCAL1-205ENST00000425815 XDHP47989 1333 aa23.27■■□□□ 1.32
SMARCAL1-205ENST00000425815 PSMD14O00487 310 aa23.26■■□□□ 1.31
SMARCAL1-205ENST00000425815 ATP2B4P23634 1241 aa23.26■■□□□ 1.31
SMARCAL1-205ENST00000425815 ALDH1L2Q3SY69 923 aa23.26■■□□□ 1.31
SMARCAL1-205ENST00000425815 MAP1SQ66K74 1059 aaPredicted RBP23.26■■□□□ 1.31
SMARCAL1-205ENST00000425815 KAZALD1Q96I82 304 aa23.26■■□□□ 1.31
SMARCAL1-205ENST00000425815 ZBTB12Q9Y330 459 aaPredicted RBP23.26■■□□□ 1.31
SMARCAL1-205ENST00000425815 SHTN1A0MZ66 631 aa23.25■■□□□ 1.31
SMARCAL1-205ENST00000425815 PTPRCP08575 1304 aa23.25■■□□□ 1.31
SMARCAL1-205ENST00000425815 ADAMTSL1Q8N6G6 1762 aa23.24■■□□□ 1.31
SMARCAL1-205ENST00000425815 IGHMBP2P38935 993 aaKnown RBP23.24■■□□□ 1.31
SMARCAL1-205ENST00000425815 LMBR1LQ6UX01 489 aa23.24■■□□□ 1.31
SMARCAL1-205ENST00000425815 USP50Q70EL3 339 aaPredicted RBP23.24■■□□□ 1.31
SMARCAL1-205ENST00000425815 CNTROBQ8N137 903 aa23.24■■□□□ 1.31
SMARCAL1-205ENST00000425815 ADARB2Q9NS39 739 aaKnown RBP23.24■■□□□ 1.31
SMARCAL1-205ENST00000425815 C9orf78Q9NZ63 289 aaPredicted RBP23.24■■□□□ 1.31
SMARCAL1-205ENST00000425815 NBPF7P0C2Y1 421 aaPredicted RBP23.23■■□□□ 1.31
SMARCAL1-205ENST00000425815 HIRAP54198 1017 aaPredicted RBP23.23■■□□□ 1.31
SMARCAL1-205ENST00000425815 KLRG1Q96E93 195 aa23.23■■□□□ 1.31
SMARCAL1-205ENST00000425815 SUCLG2Q96I99 432 aa23.23■■□□□ 1.31
SMARCAL1-205ENST00000425815 UTYO14607 1347 aa23.23■■□□□ 1.31
SMARCAL1-205ENST00000425815 ANKRD18BA2A2Z9 1011 aa23.22■■□□□ 1.31
SMARCAL1-205ENST00000425815 CCT4P50991 539 aaKnown RBP23.22■■□□□ 1.31
SMARCAL1-205ENST00000425815 CNOT7Q9UIV1 285 aaKnown RBP23.22■■□□□ 1.31
SMARCAL1-205ENST00000425815 VIL1P09327 827 aaKnown RBP23.21■■□□□ 1.31
SMARCAL1-205ENST00000425815 CT47B1P0C2W7 299 aaPredicted RBP23.21■■□□□ 1.31
SMARCAL1-205ENST00000425815 TXNRD3Q86VQ6 643 aa23.21■■□□□ 1.31
SMARCAL1-205ENST00000425815 DPF2Q92785 391 aa23.21■■□□□ 1.31
SMARCAL1-205ENST00000425815 MPHOSPH8Q99549 860 aa23.21■■□□□ 1.31
SMARCAL1-205ENST00000425815 IFIT5Q13325 482 aaKnown RBP23.2■■□□□ 1.3
SMARCAL1-205ENST00000425815 CREBZFQ9NS37 354 aa23.2■■□□□ 1.3
SMARCAL1-205ENST00000425815 SMC4Q9NTJ3 1288 aa23.2■■□□□ 1.3
SMARCAL1-205ENST00000425815 PGAP2Q9UHJ9 254 aa23.2■■□□□ 1.3
SMARCAL1-205ENST00000425815 LEMD3Q9Y2U8 911 aa23.2■■□□□ 1.3
SMARCAL1-205ENST00000425815 BRPF1P55201 1214 aaPredicted RBP23.19■■□□□ 1.3
SMARCAL1-205ENST00000425815 FMR1Q06787 632 aaKnown RBP eCLIP23.19■■□□□ 1.3
SMARCAL1-205ENST00000425815 CHRNDQ07001 517 aa23.19■■□□□ 1.3
SMARCAL1-205ENST00000425815 MICALL2Q8IY33 904 aa23.19■■□□□ 1.3
SMARCAL1-205ENST00000425815 TRPM4Q8TD43 1214 aa23.19■■□□□ 1.3
SMARCAL1-205ENST00000425815 ZNF594Q96JF6 807 aaPredicted RBP23.19■■□□□ 1.3
SMARCAL1-205ENST00000425815 NOB1Q9ULX3 412 aaKnown RBP23.19■■□□□ 1.3
SMARCAL1-205ENST00000425815 CHMP3Q9Y3E7 222 aa23.19■■□□□ 1.3
SMARCAL1-205ENST00000425815 SNAP23O00161 211 aa23.18■■□□□ 1.3
SMARCAL1-205ENST00000425815 KLRK1P26718 216 aa23.18■■□□□ 1.3
SMARCAL1-205ENST00000425815 RARSP54136 660 aaKnown RBP23.18■■□□□ 1.3
SMARCAL1-205ENST00000425815 JMYQ8N9B5 988 aa23.18■■□□□ 1.3
SMARCAL1-205ENST00000425815 ANKRD2Q9GZV1 360 aa23.18■■□□□ 1.3
SMARCAL1-205ENST00000425815 USP44Q9H0E7 712 aa23.18■■□□□ 1.3
SMARCAL1-205ENST00000425815 MED23Q9ULK4 1368 aa23.17■■□□□ 1.3
SMARCAL1-205ENST00000425815 ZNF804BA4D1E1 1349 aa23.17■■□□□ 1.3
SMARCAL1-205ENST00000425815 G3V3G9 751 aa23.17■■□□□ 1.3
SMARCAL1-205ENST00000425815 EGFRP00533 1210 aa23.17■■□□□ 1.3
SMARCAL1-205ENST00000425815 DCAF8Q5TAQ9 597 aa23.17■■□□□ 1.3
SMARCAL1-205ENST00000425815 PODNQ7Z5L7 613 aa23.17■■□□□ 1.3
SMARCAL1-205ENST00000425815 TAF5LO75529 589 aa23.16■■□□□ 1.3
SMARCAL1-205ENST00000425815 RPS12P25398 132 aaKnown RBP23.16■■□□□ 1.3
SMARCAL1-205ENST00000425815 CCDC57Q2TAC2 916 aa23.16■■□□□ 1.3
SMARCAL1-205ENST00000425815 SAMD7Q7Z3H4 446 aa23.16■■□□□ 1.3
SMARCAL1-205ENST00000425815 ANKRD44Q8N8A2 993 aa23.16■■□□□ 1.3
SMARCAL1-205ENST00000425815 HELBQ8NG08 1087 aaPredicted RBP23.16■■□□□ 1.3
SMARCAL1-205ENST00000425815 MYH3P11055 1940 aa23.16■■□□□ 1.3
SMARCAL1-205ENST00000425815 IRS2Q9Y4H2 1338 aa23.15■■□□□ 1.3
SMARCAL1-205ENST00000425815 H7C1D1 291 aa23.15■■□□□ 1.3
SMARCAL1-205ENST00000425815 RABL6Q3YEC7 729 aaPredicted RBP23.15■■□□□ 1.3
SMARCAL1-205ENST00000425815 GMLQ99445 158 aa23.15■■□□□ 1.3
SMARCAL1-205ENST00000425815 BICC1Q9H694 974 aaKnown RBP23.15■■□□□ 1.3
SMARCAL1-205ENST00000425815 TMEM88BA6NKF7 163 aa23.14■■□□□ 1.29
SMARCAL1-205ENST00000425815 TRAF5O00463 557 aa23.14■■□□□ 1.29
SMARCAL1-205ENST00000425815 RSBN1LQ6PCB5 846 aaPredicted RBP23.13■■□□□ 1.29
SMARCAL1-205ENST00000425815 LDHAL6AQ6ZMR3 332 aa23.13■■□□□ 1.29
SMARCAL1-205ENST00000425815 ZC3H15Q8WU90 426 aaKnown RBP23.13■■□□□ 1.29
SMARCAL1-205ENST00000425815 PUS3Q9BZE2 481 aaKnown RBP23.13■■□□□ 1.29
SMARCAL1-205ENST00000425815 COA1Q9GZY4 146 aa23.13■■□□□ 1.29
SMARCAL1-205ENST00000425815 USP17L3A6NCW0 530 aa23.12■■□□□ 1.29
SMARCAL1-205ENST00000425815 USP17L4A6NCW7 530 aa23.12■■□□□ 1.29
SMARCAL1-205ENST00000425815 HNRNPUQ00839 825 aaKnown RBP eCLIP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms