RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 L2HGDHQ9H9P8 463 aa13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 ARGLU1Q9NWB6 273 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 VPS18Q9P253 973 aa13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 SSH2Q76I76 1423 aa13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 SLIT1O75093 1534 aa13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 SFPQP23246 707 aaKnown RBP eCLIP13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 SRLQ86TD4 932 aa13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 PHAXQ9H814 394 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 TFRCP02786 760 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-202ENST00000424880 NBPF7P0C2Y1 421 aaPredicted RBP13.16□□□□□ -0.3
SEC61A1-202ENST00000424880 HSP90B1P14625 803 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-202ENST00000424880 DPCR1Q3MIW9 517 aa13.16□□□□□ -0.3
SEC61A1-202ENST00000424880 RNF20Q5VTR2 975 aa13.16□□□□□ -0.3
SEC61A1-202ENST00000424880 SEC62Q99442 399 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-202ENST00000424880 STK31Q9BXU1 1019 aa13.16□□□□□ -0.3
SEC61A1-202ENST00000424880 ZSWIM6Q9HCJ5 1215 aa13.16□□□□□ -0.3
SEC61A1-202ENST00000424880 AMOTL2Q9Y2J4 779 aa13.16□□□□□ -0.3
SEC61A1-202ENST00000424880 A0A1B0GVL5 298 aa13.16□□□□□ -0.3
SEC61A1-202ENST00000424880 ANXA1P04083 346 aa13.16□□□□□ -0.3
SEC61A1-202ENST00000424880 ATP1A3P13637 1013 aa13.16□□□□□ -0.3
SEC61A1-202ENST00000424880 NDUFB9Q9Y6M9 179 aa13.16□□□□□ -0.3
SEC61A1-202ENST00000424880 CLGNO14967 610 aa13.15□□□□□ -0.3
SEC61A1-202ENST00000424880 MYCNP04198 464 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-202ENST00000424880 ZKSCAN1P17029 563 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-202ENST00000424880 HSP90AB2PQ58FF8 381 aa13.15□□□□□ -0.3
SEC61A1-202ENST00000424880 CREB3L3Q68CJ9 461 aa13.15□□□□□ -0.3
SEC61A1-202ENST00000424880 SDF4Q9BRK5 362 aa13.15□□□□□ -0.3
SEC61A1-202ENST00000424880 PA2G4Q9UQ80 394 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-202ENST00000424880 ANKRD26Q9UPS8 1709 aa13.15□□□□□ -0.3
SEC61A1-202ENST00000424880 STX1AQ16623 288 aa13.15□□□□□ -0.3
SEC61A1-202ENST00000424880 THEMISQ8N1K5 641 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-202ENST00000424880 ME1P48163 572 aa13.15□□□□□ -0.31
SEC61A1-202ENST00000424880 GPS2Q13227 327 aa13.15□□□□□ -0.31
SEC61A1-202ENST00000424880 AXDND1Q5T1B0 1012 aaPredicted RBP13.15□□□□□ -0.31
SEC61A1-202ENST00000424880 CC2D1AQ6P1N0 951 aaPredicted RBP13.15□□□□□ -0.31
SEC61A1-202ENST00000424880 RBM43Q6ZSC3 357 aaKnown RBP13.15□□□□□ -0.31
SEC61A1-202ENST00000424880 IRX2Q9BZI1 471 aaPredicted RBP13.15□□□□□ -0.31
SEC61A1-202ENST00000424880 ATG3Q9NT62 314 aa13.15□□□□□ -0.31
SEC61A1-202ENST00000424880 EIF2S2P20042 333 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 ICE2Q659A1 982 aa13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 EDC3Q96F86 508 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 RABEP2Q9H5N1 569 aa13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 SH2B1Q9NRF2 756 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 CCDC9Q9Y3X0 531 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 ELP1O95163 1332 aa13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 ETF1P62495 437 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 WDR24Q96S15 920 aa13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 PARD6BQ9BYG5 372 aa13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 TBX22Q9Y458 520 aa13.14□□□□□ -0.31
SEC61A1-202ENST00000424880 KINO60870 393 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 ZSCAN31Q96LW9 406 aaPredicted RBP13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 PDE11AQ9HCR9 933 aa13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 BRMS1Q9HCU9 246 aa13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 HDAC5Q9UQL6 1122 aa13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 KIF20BQ96Q89 1820 aa13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 NEMFO60524 1076 aa13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 CDC25BP30305 580 aa13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 EIF4A2Q14240 407 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 JRKLQ9Y4A0 524 aa13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 TADA3O75528 432 aa13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 TOB2Q14106 344 aaPredicted RBP13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 BLOC1S2Q6QNY1 142 aa13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 SARM1Q6SZW1 724 aa13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 FBXO41Q8TF61 875 aa13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 USP28Q96RU2 1077 aa13.13□□□□□ -0.31
SEC61A1-202ENST00000424880 ADCY9O60503 1353 aa13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 CCT2P78371 535 aaKnown RBP13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 NECTIN1Q15223 517 aa13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 FSIP1Q8NA03 581 aa13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 PUF60Q9UHX1 559 aaKnown RBP13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 TTC21BQ7Z4L5 1316 aa13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 DLG5Q8TDM6 1919 aa13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 APPP05067 770 aa13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 TTLL5Q6EMB2 1281 aa13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 OTUD7BQ6GQQ9 843 aa13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 FBXO18Q8NFZ0 1043 aa13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 DPF2Q92785 391 aa13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 COG3Q96JB2 828 aa13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 CCDC8Q9H0W5 538 aaPredicted RBP13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 MAP2P11137 1827 aaKnown RBP13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 CDC42BPGQ6DT37 1551 aa13.12□□□□□ -0.31
SEC61A1-202ENST00000424880 SLC27A2O14975 620 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 GNG11P61952 73 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 NMIQ13287 307 aaPredicted RBP13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 TRIM65Q6PJ69 517 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 CEP57L1Q8IYX8 460 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 NCAPGQ9BPX3 1015 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 ARFGAP3Q9NP61 516 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 PARP3Q9Y6F1 533 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 PDCP20941 246 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 CCDC73Q6ZRK6 1079 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 AATKQ6ZMQ8 1374 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 A0A0D9SFI3 127 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 ZRSR1Q15695 479 aaKnown RBP13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 DESI2Q9BSY9 194 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms