RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 TRAF5O00463 557 aa20.74■□□□□ 0.91
DDR1-234ENST00000424544 CWF19L2Q2TBE0 894 aaKnown RBP20.74■□□□□ 0.91
DDR1-234ENST00000424544 EYA3Q99504 573 aa20.74■□□□□ 0.91
DDR1-234ENST00000424544 BCL2L13Q9BXK5 485 aa20.74■□□□□ 0.91
DDR1-234ENST00000424544 ZBTB12Q9Y330 459 aaPredicted RBP20.74■□□□□ 0.91
DDR1-234ENST00000424544 RTL9Q8NET4 1388 aa20.73■□□□□ 0.91
DDR1-234ENST00000424544 TRPM4Q8TD43 1214 aa20.73■□□□□ 0.91
DDR1-234ENST00000424544 PLA2G12BQ9BX93 195 aa20.73■□□□□ 0.91
DDR1-234ENST00000424544 ZC3H12CQ9C0D7 883 aaKnown RBP20.73■□□□□ 0.91
DDR1-234ENST00000424544 SPINK5Q9NQ38 1064 aaPredicted RBP20.73■□□□□ 0.91
DDR1-234ENST00000424544 WBP1LQ9NX94 342 aa20.73■□□□□ 0.91
DDR1-234ENST00000424544 ECE2O60344 883 aa20.72■□□□□ 0.91
DDR1-234ENST00000424544 VIL1P09327 827 aaKnown RBP20.72■□□□□ 0.91
DDR1-234ENST00000424544 CASP7P55210 303 aa20.72■□□□□ 0.91
DDR1-234ENST00000424544 CTSWP56202 376 aa20.72■□□□□ 0.91
DDR1-234ENST00000424544 NEXNQ0ZGT2 675 aa20.72■□□□□ 0.91
DDR1-234ENST00000424544 FLIIQ13045 1269 aa20.72■□□□□ 0.91
DDR1-234ENST00000424544 DOK7Q18PE1 504 aa20.72■□□□□ 0.91
DDR1-234ENST00000424544 GPR101Q96P66 508 aaPredicted RBP20.72■□□□□ 0.91
DDR1-234ENST00000424544 CCDC85AQ96PX6 553 aaPredicted RBP20.72■□□□□ 0.91
DDR1-234ENST00000424544 H7C1D1 291 aa20.71■□□□□ 0.91
DDR1-234ENST00000424544 RPS12P25398 132 aaKnown RBP20.71■□□□□ 0.91
DDR1-234ENST00000424544 MICALL2Q8IY33 904 aa20.71■□□□□ 0.91
DDR1-234ENST00000424544 GGA1Q9UJY5 639 aa20.71■□□□□ 0.91
DDR1-234ENST00000424544 EXOSC9Q06265 439 aaKnown RBP20.7■□□□□ 0.9
DDR1-234ENST00000424544 GCKRQ14397 625 aa20.7■□□□□ 0.9
DDR1-234ENST00000424544 SAMD7Q7Z3H4 446 aa20.7■□□□□ 0.9
DDR1-234ENST00000424544 ANKRD18AQ8IVF6 992 aa20.7■□□□□ 0.9
DDR1-234ENST00000424544 GLIS2Q9BZE0 524 aaPredicted RBP20.7■□□□□ 0.9
DDR1-234ENST00000424544 GREM2Q9H772 168 aa20.7■□□□□ 0.9
DDR1-234ENST00000424544 BSDC1Q9NW68 430 aaPredicted RBP20.7■□□□□ 0.9
DDR1-234ENST00000424544 ANKIB1Q9P2G1 1089 aa20.7■□□□□ 0.9
DDR1-234ENST00000424544 TLL2Q9Y6L7 1015 aa20.7■□□□□ 0.9
DDR1-234ENST00000424544 WDR33Q9C0J8 1336 aaKnown RBP20.7■□□□□ 0.9
DDR1-234ENST00000424544 CACNA1FO60840 1977 aa20.7■□□□□ 0.9
DDR1-234ENST00000424544 TRPM7Q96QT4 1865 aa20.69■□□□□ 0.9
DDR1-234ENST00000424544 SCN9AQ15858 1988 aa20.69■□□□□ 0.9
DDR1-234ENST00000424544 WTIPA6NIX2 430 aaPredicted RBP20.69■□□□□ 0.9
DDR1-234ENST00000424544 FOXN1O15353 648 aa20.69■□□□□ 0.9
DDR1-234ENST00000424544 UFL1O94874 794 aa20.69■□□□□ 0.9
DDR1-234ENST00000424544 CSF1RP07333 972 aa20.69■□□□□ 0.9
DDR1-234ENST00000424544 CDC37L1Q7L3B6 337 aa20.69■□□□□ 0.9
DDR1-234ENST00000424544 ABT1Q9ULW3 272 aaKnown RBP20.69■□□□□ 0.9
DDR1-234ENST00000424544 MINPP1Q9UNW1 487 aa20.69■□□□□ 0.9
DDR1-234ENST00000424544 SALL2Q9Y467 1007 aaPredicted RBP20.69■□□□□ 0.9
DDR1-234ENST00000424544 XDHP47989 1333 aa20.69■□□□□ 0.9
DDR1-234ENST00000424544 EGFRP00533 1210 aa20.68■□□□□ 0.9
DDR1-234ENST00000424544 SAPCD2Q86UD0 394 aa20.68■□□□□ 0.9
DDR1-234ENST00000424544 DNAAF4Q8WXU2 420 aa20.68■□□□□ 0.9
DDR1-234ENST00000424544 CDC5LQ99459 802 aaKnown RBP20.68■□□□□ 0.9
DDR1-234ENST00000424544 ATP2B4P23634 1241 aa20.67■□□□□ 0.9
DDR1-234ENST00000424544 UBE3BQ7Z3V4 1068 aa20.67■□□□□ 0.9
DDR1-234ENST00000424544 FAM9BQ8IZU0 186 aa20.67■□□□□ 0.9
DDR1-234ENST00000424544 LINS1Q8NG48 757 aa20.67■□□□□ 0.9
DDR1-234ENST00000424544 PRDM10Q9NQV6 1147 aa20.67■□□□□ 0.9
DDR1-234ENST00000424544 ZNF609O15014 1411 aa20.67■□□□□ 0.9
DDR1-234ENST00000424544 TNS4Q8IZW8 715 aa20.66■□□□□ 0.9
DDR1-234ENST00000424544 HHIPL1Q96JK4 782 aa20.66■□□□□ 0.9
DDR1-234ENST00000424544 GMLQ99445 158 aa20.66■□□□□ 0.9
DDR1-234ENST00000424544 CELF2O95319 508 aaKnown RBP20.65■□□□□ 0.9
DDR1-234ENST00000424544 ZNF280AP59817 542 aaPredicted RBP20.65■□□□□ 0.9
DDR1-234ENST00000424544 FKBP5Q13451 457 aaPredicted RBP20.65■□□□□ 0.9
DDR1-234ENST00000424544 PODNQ7Z5L7 613 aa20.65■□□□□ 0.9
DDR1-234ENST00000424544 CAPNS2Q96L46 248 aa20.65■□□□□ 0.9
DDR1-234ENST00000424544 ZNF521Q96K83 1311 aa20.64■□□□□ 0.89
DDR1-234ENST00000424544 MAP2K1Q02750 393 aaPredicted RBP20.64■□□□□ 0.89
DDR1-234ENST00000424544 TBC1D10BQ4KMP7 808 aaPredicted RBP20.64■□□□□ 0.89
DDR1-234ENST00000424544 USP48Q86UV5 1035 aa20.64■□□□□ 0.89
DDR1-234ENST00000424544 AGBL3Q8NEM8 1001 aa20.64■□□□□ 0.89
DDR1-234ENST00000424544 POLR2AP24928 1970 aaKnown RBP20.63■□□□□ 0.89
DDR1-234ENST00000424544 MYH3P11055 1940 aa20.63■□□□□ 0.89
DDR1-234ENST00000424544 ECE1P42892 770 aa20.63■□□□□ 0.89
DDR1-234ENST00000424544 CTCFP49711 727 aaPredicted RBP20.63■□□□□ 0.89
DDR1-234ENST00000424544 BEND3Q5T5X7 828 aa20.63■□□□□ 0.89
DDR1-234ENST00000424544 CYP4F22Q6NT55 531 aa20.63■□□□□ 0.89
DDR1-234ENST00000424544 RSBN1LQ6PCB5 846 aaPredicted RBP20.63■□□□□ 0.89
DDR1-234ENST00000424544 DLK2Q6UY11 383 aa20.63■□□□□ 0.89
DDR1-234ENST00000424544 MAP2K2P36507 400 aa20.62■□□□□ 0.89
DDR1-234ENST00000424544 CCT4P50991 539 aaKnown RBP20.62■□□□□ 0.89
DDR1-234ENST00000424544 MYH16Q9H6N6 1097 aa20.62■□□□□ 0.89
DDR1-234ENST00000424544 MED23Q9ULK4 1368 aa20.61■□□□□ 0.89
DDR1-234ENST00000424544 F6X3S4 739 aa20.61■□□□□ 0.89
DDR1-234ENST00000424544 ITGA6P23229 1130 aa20.61■□□□□ 0.89
DDR1-234ENST00000424544 FOXO4P98177 505 aa20.61■□□□□ 0.89
DDR1-234ENST00000424544 TXNRD3Q86VQ6 643 aa20.61■□□□□ 0.89
DDR1-234ENST00000424544 LEMD3Q9Y2U8 911 aa20.61■□□□□ 0.89
DDR1-234ENST00000424544 THSD7BQ9C0I4 1608 aa20.6■□□□□ 0.89
DDR1-234ENST00000424544 USP17L3A6NCW0 530 aa20.6■□□□□ 0.89
DDR1-234ENST00000424544 USP17L4A6NCW7 530 aa20.6■□□□□ 0.89
DDR1-234ENST00000424544 RBM26Q5T8P6 1007 aaKnown RBP20.6■□□□□ 0.89
DDR1-234ENST00000424544 USP17L1Q7RTZ2 530 aa20.6■□□□□ 0.89
DDR1-234ENST00000424544 AIDAQ96BJ3 306 aa20.6■□□□□ 0.89
DDR1-234ENST00000424544 G3V3G9 751 aa20.59■□□□□ 0.89
DDR1-234ENST00000424544 HSPA8P11142 646 aaKnown RBP20.59■□□□□ 0.89
DDR1-234ENST00000424544 IGHMBP2P38935 993 aaKnown RBP20.59■□□□□ 0.89
DDR1-234ENST00000424544 KIF4BQ2VIQ3 1234 aa20.59■□□□□ 0.89
DDR1-234ENST00000424544 FAM161AQ3B820 660 aa20.59■□□□□ 0.89
DDR1-234ENST00000424544 DCAF8Q5TAQ9 597 aa20.59■□□□□ 0.89
DDR1-234ENST00000424544 KRT26Q7Z3Y9 468 aa20.59■□□□□ 0.89
DDR1-234ENST00000424544 PSME4Q14997 1843 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms