RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 BRF1Q92994 677 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 PABPN1LA6NDY0 278 aaKnown RBP13.74□□□□□ -0.21
LAMA4-207ENST00000424408 PCK1P35558 622 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 B4GALNT4Q76KP1 1039 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 SNX21Q969T3 373 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 ATAD2Q6PL18 1390 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 CIB2O75838 187 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 SDSP20132 328 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 ERO1AQ96HE7 468 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 LRRC2Q9BYS8 371 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 KLF18A0A0U1RQI7 1052 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 TBCAO75347 108 aaKnown RBP13.74□□□□□ -0.21
LAMA4-207ENST00000424408 VAV2P52735 878 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 IFIT5Q13325 482 aaKnown RBP13.74□□□□□ -0.21
LAMA4-207ENST00000424408 INTS8Q75QN2 995 aaKnown RBP13.74□□□□□ -0.21
LAMA4-207ENST00000424408 FEZ2Q9UHY8 353 aaPredicted RBP13.74□□□□□ -0.21
LAMA4-207ENST00000424408 TTC21AQ8NDW8 1320 aa13.74□□□□□ -0.21
LAMA4-207ENST00000424408 UBXN1Q04323 297 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 LMNTD2Q8IXW0 634 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 ALG1Q9BT22 464 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 UTP14AQ9BVJ6 771 aaKnown RBP13.73□□□□□ -0.21
LAMA4-207ENST00000424408 ARL1P40616 181 aaPredicted RBP13.73□□□□□ -0.21
LAMA4-207ENST00000424408 PPM1FP49593 454 aaPredicted RBP13.73□□□□□ -0.21
LAMA4-207ENST00000424408 TTF1Q15361 905 aaPredicted RBP13.73□□□□□ -0.21
LAMA4-207ENST00000424408 MFSD6Q6ZSS7 791 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 KAT14Q9H8E8 782 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 CCDC25Q86WR0 208 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 INPP5BP32019 993 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 CEP85LQ5SZL2 805 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 TRIM7Q9C029 511 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 TMOD2Q9NZR1 351 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 PPP1R1BQ9UD71 204 aaPredicted RBP13.73□□□□□ -0.21
LAMA4-207ENST00000424408 C8orf34Q49A92 452 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 CCDC174Q6PII3 467 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 CEP120Q8N960 986 aa13.73□□□□□ -0.21
LAMA4-207ENST00000424408 ATP2A1O14983 1001 aa13.72□□□□□ -0.21
LAMA4-207ENST00000424408 VIMP08670 466 aaKnown RBP13.72□□□□□ -0.21
LAMA4-207ENST00000424408 HPDP32754 393 aaPredicted RBP13.72□□□□□ -0.21
LAMA4-207ENST00000424408 CCDC50Q8IVM0 306 aa13.72□□□□□ -0.21
LAMA4-207ENST00000424408 MRVI1Q9Y6F6 885 aa13.72□□□□□ -0.21
LAMA4-207ENST00000424408 IGF1RP08069 1367 aa13.72□□□□□ -0.21
LAMA4-207ENST00000424408 KIF3CO14782 793 aa13.72□□□□□ -0.21
LAMA4-207ENST00000424408 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
LAMA4-207ENST00000424408 CCDC42Q96M95 316 aa13.72□□□□□ -0.21
LAMA4-207ENST00000424408 PPP1R9BQ96SB3 815 aa13.72□□□□□ -0.21
LAMA4-207ENST00000424408 SYNCQ9H7C4 482 aa13.72□□□□□ -0.21
LAMA4-207ENST00000424408 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
LAMA4-207ENST00000424408 GBP1P32455 592 aa13.72□□□□□ -0.21
LAMA4-207ENST00000424408 DHX58Q96C10 678 aa13.72□□□□□ -0.21
LAMA4-207ENST00000424408 BICD1Q96G01 975 aa13.72□□□□□ -0.21
LAMA4-207ENST00000424408 SLC4A8Q2Y0W8 1093 aa13.71□□□□□ -0.21
LAMA4-207ENST00000424408 C9orf84Q5VXU9 1444 aa13.71□□□□□ -0.21
LAMA4-207ENST00000424408 Q6ZUG5 572 aa13.71□□□□□ -0.21
LAMA4-207ENST00000424408 TCEANC2Q96MN5 208 aa13.71□□□□□ -0.21
LAMA4-207ENST00000424408 RAD54L2Q9Y4B4 1467 aa13.71□□□□□ -0.21
LAMA4-207ENST00000424408 STARD3NLO95772 234 aa13.71□□□□□ -0.21
LAMA4-207ENST00000424408 IFT74Q96LB3 600 aa13.71□□□□□ -0.21
LAMA4-207ENST00000424408 SSX2IPQ9Y2D8 614 aa13.71□□□□□ -0.21
LAMA4-207ENST00000424408 PSMA7O14818 248 aa13.71□□□□□ -0.22
LAMA4-207ENST00000424408 CACNA2D3Q8IZS8 1091 aa13.71□□□□□ -0.22
LAMA4-207ENST00000424408 RABEP2Q9H5N1 569 aa13.71□□□□□ -0.22
LAMA4-207ENST00000424408 TNNC1P63316 161 aa13.71□□□□□ -0.22
LAMA4-207ENST00000424408 SNRKQ9NRH2 765 aa13.71□□□□□ -0.22
LAMA4-207ENST00000424408 EEF2P13639 858 aaKnown RBP13.7□□□□□ -0.22
LAMA4-207ENST00000424408 ESYT1Q9BSJ8 1104 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 MTRF1LQ9UGC7 380 aaKnown RBP13.7□□□□□ -0.22
LAMA4-207ENST00000424408 STX17P56962 302 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 MAP3K9P80192 1104 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 PPP1R7Q15435 360 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 CYB5RLQ6IPT4 315 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 PPP1R12CQ9BZL4 782 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 LUC7L2Q9Y383 392 aaKnown RBP13.7□□□□□ -0.22
LAMA4-207ENST00000424408 SF3B2Q13435 895 aaKnown RBP13.7□□□□□ -0.22
LAMA4-207ENST00000424408 TSGA10Q9BZW7 698 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.7□□□□□ -0.22
LAMA4-207ENST00000424408 ANKIB1Q9P2G1 1089 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 NDUFAB1O14561 156 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 ASIC1P78348 528 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 FLIIQ13045 1269 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 HDAC1Q13547 482 aaPredicted RBP13.7□□□□□ -0.22
LAMA4-207ENST00000424408 FAM114A2Q9NRY5 505 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 SAMM50Q9Y512 469 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 TSPY2A6NKD2 308 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 GABPB1Q06547 395 aaPredicted RBP13.7□□□□□ -0.22
LAMA4-207ENST00000424408 AFAP1Q8N556 730 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 MAP3K2Q9Y2U5 619 aa13.7□□□□□ -0.22
LAMA4-207ENST00000424408 SEPT14Q6ZU15 432 aa13.69□□□□□ -0.22
LAMA4-207ENST00000424408 BAG1Q99933 345 aaPredicted RBP13.69□□□□□ -0.22
LAMA4-207ENST00000424408 TUBBP07437 444 aa13.69□□□□□ -0.22
LAMA4-207ENST00000424408 CFAP157Q5JU67 520 aa13.69□□□□□ -0.22
LAMA4-207ENST00000424408 PPP1R42Q7Z4L9 355 aa13.69□□□□□ -0.22
LAMA4-207ENST00000424408 NDC80O14777 642 aa13.69□□□□□ -0.22
LAMA4-207ENST00000424408 SPTLC2O15270 562 aa13.69□□□□□ -0.22
LAMA4-207ENST00000424408 ELF2Q15723 593 aa13.69□□□□□ -0.22
LAMA4-207ENST00000424408 RBM8AQ9Y5S9 174 aaKnown RBP13.69□□□□□ -0.22
LAMA4-207ENST00000424408 GAPVD1Q14C86 1478 aa13.69□□□□□ -0.22
LAMA4-207ENST00000424408 BMP15O95972 392 aa13.69□□□□□ -0.22
LAMA4-207ENST00000424408 PROSER2Q86WR7 435 aaPredicted RBP13.69□□□□□ -0.22
LAMA4-207ENST00000424408 NEK11Q8NG66 645 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms