RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 STXBP5LQ9Y2K9 1186 aa8.51□□□□□ -1.05
SDCBP-203ENST00000424270 RBBP6Q7Z6E9 1792 aaKnown RBP8.5□□□□□ -1.05
SDCBP-203ENST00000424270 RGL2O15211 777 aa8.5□□□□□ -1.05
SDCBP-203ENST00000424270 KCNQ3O43525 872 aa8.5□□□□□ -1.05
SDCBP-203ENST00000424270 ECE2O60344 883 aa8.5□□□□□ -1.05
SDCBP-203ENST00000424270 COL9A1P20849 921 aa8.5□□□□□ -1.05
SDCBP-203ENST00000424270 INHBEP58166 350 aa8.5□□□□□ -1.05
SDCBP-203ENST00000424270 SP3Q02447 781 aa8.5□□□□□ -1.05
SDCBP-203ENST00000424270 SUSD4Q5VX71 490 aa8.5□□□□□ -1.05
SDCBP-203ENST00000424270 C3orf67Q6ZVT6 689 aa8.5□□□□□ -1.05
SDCBP-203ENST00000424270 Q7L0L9 218 aa8.5□□□□□ -1.05
SDCBP-203ENST00000424270 IFNL1Q8IU54 200 aa8.5□□□□□ -1.05
SDCBP-203ENST00000424270 ZBTB3Q9H5J0 574 aa8.5□□□□□ -1.05
SDCBP-203ENST00000424270 NSFL1CQ9UNZ2 370 aaKnown RBP8.5□□□□□ -1.05
SDCBP-203ENST00000424270 PTCH2Q9Y6C5 1203 aa8.5□□□□□ -1.05
SDCBP-203ENST00000424270 ZNF609O15014 1411 aa8.49□□□□□ -1.05
SDCBP-203ENST00000424270 A0A1W2PPC1 479 aa8.49□□□□□ -1.05
SDCBP-203ENST00000424270 GAS2L2Q8NHY3 880 aa8.49□□□□□ -1.05
SDCBP-203ENST00000424270 SH3TC2Q8TF17 1288 aa8.49□□□□□ -1.05
SDCBP-203ENST00000424270 SLC10A4Q96EP9 437 aa8.49□□□□□ -1.05
SDCBP-203ENST00000424270 EYA3Q99504 573 aa8.49□□□□□ -1.05
SDCBP-203ENST00000424270 SZT2Q5T011 3432 aa8.48□□□□□ -1.05
SDCBP-203ENST00000424270 NBPF26B4DH59 902 aa8.48□□□□□ -1.05
SDCBP-203ENST00000424270 EVI5O60447 810 aa8.48□□□□□ -1.05
SDCBP-203ENST00000424270 PTPN12Q05209 780 aaKnown RBP8.48□□□□□ -1.05
SDCBP-203ENST00000424270 CRHR2Q13324 411 aa8.48□□□□□ -1.05
SDCBP-203ENST00000424270 SPRYD7Q5W111 196 aa8.48□□□□□ -1.05
SDCBP-203ENST00000424270 NBPF10Q6P3W6 841 aaKnown RBP8.48□□□□□ -1.05
SDCBP-203ENST00000424270 IL17REQ8NFR9 667 aa8.48□□□□□ -1.05
SDCBP-203ENST00000424270 MYOZ2Q9NPC6 264 aa8.48□□□□□ -1.05
SDCBP-203ENST00000424270 KCNQ5Q9NR82 932 aa8.48□□□□□ -1.05
SDCBP-203ENST00000424270 ANGEL1Q9UNK9 670 aaKnown RBP8.48□□□□□ -1.05
SDCBP-203ENST00000424270 RRP7AQ9Y3A4 280 aaKnown RBP8.48□□□□□ -1.05
SDCBP-203ENST00000424270 MKI67P46013 3256 aaKnown RBP8.47□□□□□ -1.05
SDCBP-203ENST00000424270 ERVV-1B6SEH8 477 aa8.47□□□□□ -1.05
SDCBP-203ENST00000424270 U2SURPO15042 1029 aaKnown RBP8.47□□□□□ -1.05
SDCBP-203ENST00000424270 ECM2O94769 699 aaPredicted RBP8.47□□□□□ -1.05
SDCBP-203ENST00000424270 USP17L8P0C7I0 530 aa8.47□□□□□ -1.05
SDCBP-203ENST00000424270 MYL6BP14649 208 aa8.47□□□□□ -1.05
SDCBP-203ENST00000424270 KIF22Q14807 665 aa8.47□□□□□ -1.05
SDCBP-203ENST00000424270 NKX2-3Q8TAU0 364 aa8.47□□□□□ -1.05
SDCBP-203ENST00000424270 FAM122AQ96E09 287 aa8.47□□□□□ -1.05
SDCBP-203ENST00000424270 UTP14AQ9BVJ6 771 aaKnown RBP8.47□□□□□ -1.05
SDCBP-203ENST00000424270 ZC3H12CQ9C0D7 883 aaKnown RBP8.47□□□□□ -1.05
SDCBP-203ENST00000424270 BIN2Q9UBW5 565 aaPredicted RBP8.47□□□□□ -1.05
SDCBP-203ENST00000424270 STAP2Q9UGK3 403 aa8.47□□□□□ -1.05
SDCBP-203ENST00000424270 MAP3K15Q6ZN16 1313 aa8.47□□□□□ -1.05
SDCBP-203ENST00000424270 UBN2Q6ZU65 1347 aa8.47□□□□□ -1.05
SDCBP-203ENST00000424270 WDHD1O75717 1129 aaPredicted RBP8.46□□□□□ -1.06
SDCBP-203ENST00000424270 NTSR2O95665 410 aa8.46□□□□□ -1.06
SDCBP-203ENST00000424270 GRAPQ13588 217 aa8.46□□□□□ -1.06
SDCBP-203ENST00000424270 TMC4Q7Z404 712 aa8.46□□□□□ -1.06
SDCBP-203ENST00000424270 GRAPLQ8TC17 118 aaPredicted RBP8.46□□□□□ -1.06
SDCBP-203ENST00000424270 RTF1Q92541 710 aaKnown RBP8.46□□□□□ -1.06
SDCBP-203ENST00000424270 FBXW7Q969H0 707 aa8.46□□□□□ -1.06
SDCBP-203ENST00000424270 A0A0C4DFX4 3053 aa8.46□□□□□ -1.06
SDCBP-203ENST00000424270 RTL9Q8NET4 1388 aa8.46□□□□□ -1.06
SDCBP-203ENST00000424270 IBTKQ9P2D0 1353 aaPredicted RBP8.46□□□□□ -1.06
SDCBP-203ENST00000424270 POLR2AP24928 1970 aaKnown RBP8.45□□□□□ -1.06
SDCBP-203ENST00000424270 SPDYE2BA6NHP3 402 aa8.45□□□□□ -1.06
SDCBP-203ENST00000424270 IGF2BP3O00425 579 aaKnown RBP eCLIP8.45□□□□□ -1.06
SDCBP-203ENST00000424270 ZBTB7BO15156 539 aaPredicted RBP8.45□□□□□ -1.06
SDCBP-203ENST00000424270 DIAPH1O60610 1272 aaKnown RBP8.45□□□□□ -1.06
SDCBP-203ENST00000424270 SPDYE6P0CI01 402 aa8.45□□□□□ -1.06
SDCBP-203ENST00000424270 HCLS1P14317 486 aaPredicted RBP8.45□□□□□ -1.06
SDCBP-203ENST00000424270 SPDYE2Q495Y8 402 aa8.45□□□□□ -1.06
SDCBP-203ENST00000424270 PARP10Q53GL7 1025 aa8.45□□□□□ -1.06
SDCBP-203ENST00000424270 OGFOD1Q8N543 542 aa8.45□□□□□ -1.06
SDCBP-203ENST00000424270 KIAA0100Q14667 2235 aaKnown RBP8.44□□□□□ -1.06
SDCBP-203ENST00000424270 FARP2O94887 1054 aaPredicted RBP8.44□□□□□ -1.06
SDCBP-203ENST00000424270 VIL1P09327 827 aaKnown RBP8.44□□□□□ -1.06
SDCBP-203ENST00000424270 ZBTB48P10074 688 aaPredicted RBP8.44□□□□□ -1.06
SDCBP-203ENST00000424270 ZNF280AP59817 542 aaPredicted RBP8.44□□□□□ -1.06
SDCBP-203ENST00000424270 RSBN1LQ6PCB5 846 aaPredicted RBP8.44□□□□□ -1.06
SDCBP-203ENST00000424270 TTLL7Q6ZT98 887 aa8.44□□□□□ -1.06
SDCBP-203ENST00000424270 AGBL3Q8NEM8 1001 aa8.44□□□□□ -1.06
SDCBP-203ENST00000424270 PRO3102Q9H379 93 aa8.44□□□□□ -1.06
SDCBP-203ENST00000424270 MTMR10Q9NXD2 777 aa8.44□□□□□ -1.06
SDCBP-203ENST00000424270 CEP290O15078 2479 aa8.43□□□□□ -1.06
SDCBP-203ENST00000424270 TMEM265A0A087WTH1 108 aa8.43□□□□□ -1.06
SDCBP-203ENST00000424270 PPP1R12BO60237 982 aaPredicted RBP8.43□□□□□ -1.06
SDCBP-203ENST00000424270 GPSM2P81274 684 aa8.43□□□□□ -1.06
SDCBP-203ENST00000424270 TAF1CQ15572 869 aaPredicted RBP8.43□□□□□ -1.06
SDCBP-203ENST00000424270 NBPF9Q3BBW0 867 aa8.43□□□□□ -1.06
SDCBP-203ENST00000424270 GPR153Q6NV75 609 aa8.43□□□□□ -1.06
SDCBP-203ENST00000424270 WNK4Q96J92 1243 aa8.43□□□□□ -1.06
SDCBP-203ENST00000424270 PANK3Q9H999 370 aa8.43□□□□□ -1.06
SDCBP-203ENST00000424270 ZFYVE28Q9HCC9 887 aa8.43□□□□□ -1.06
SDCBP-203ENST00000424270 ANKIB1Q9P2G1 1089 aa8.43□□□□□ -1.06
SDCBP-203ENST00000424270 FZD1Q9UP38 647 aa8.43□□□□□ -1.06
SDCBP-203ENST00000424270 RPTORQ8N122 1335 aa8.43□□□□□ -1.06
SDCBP-203ENST00000424270 IRS2Q9Y4H2 1338 aa8.43□□□□□ -1.06
SDCBP-203ENST00000424270 COL6A3P12111 3177 aa8.42□□□□□ -1.06
SDCBP-203ENST00000424270 UFL1O94874 794 aa8.42□□□□□ -1.06
SDCBP-203ENST00000424270 PLA2G5P39877 138 aa8.42□□□□□ -1.06
SDCBP-203ENST00000424270 APOBEC3FQ8IUX4 373 aaKnown RBP8.42□□□□□ -1.06
SDCBP-203ENST00000424270 ZNF34Q8IZ26 560 aa8.42□□□□□ -1.06
SDCBP-203ENST00000424270 RAET1EQ8TD07 263 aa8.42□□□□□ -1.06
SDCBP-203ENST00000424270 SYMPKQ92797 1274 aaKnown RBP8.42□□□□□ -1.06
SDCBP-203ENST00000424270 FAM161BQ96MY7 647 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms