RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 CCDC85AQ96PX6 553 aaPredicted RBP21.45■■□□□ 1.02
CCDC78-203ENST00000423653 XDHP47989 1333 aa21.45■■□□□ 1.02
CCDC78-203ENST00000423653 G3V3G9 751 aa21.44■■□□□ 1.02
CCDC78-203ENST00000423653 H7C1D1 291 aa21.44■■□□□ 1.02
CCDC78-203ENST00000423653 RPS12P25398 132 aaKnown RBP21.44■■□□□ 1.02
CCDC78-203ENST00000423653 EXOSC9Q06265 439 aaKnown RBP21.44■■□□□ 1.02
CCDC78-203ENST00000423653 DCAF8Q5TAQ9 597 aa21.44■■□□□ 1.02
CCDC78-203ENST00000423653 DNAAF4Q8WXU2 420 aa21.44■■□□□ 1.02
CCDC78-203ENST00000423653 ZC3H12CQ9C0D7 883 aaKnown RBP21.44■■□□□ 1.02
CCDC78-203ENST00000423653 ABT1Q9ULW3 272 aaKnown RBP21.44■■□□□ 1.02
CCDC78-203ENST00000423653 SPEF2Q9C093 1822 aa21.43■■□□□ 1.02
CCDC78-203ENST00000423653 RASSF10A6NK89 507 aa21.43■■□□□ 1.02
CCDC78-203ENST00000423653 PSMD14O00487 310 aa21.43■■□□□ 1.02
CCDC78-203ENST00000423653 UBE3BQ7Z3V4 1068 aa21.43■■□□□ 1.02
CCDC78-203ENST00000423653 MICALL2Q8IY33 904 aa21.43■■□□□ 1.02
CCDC78-203ENST00000423653 ZC3H15Q8WU90 426 aaKnown RBP21.43■■□□□ 1.02
CCDC78-203ENST00000423653 DPF2Q92785 391 aa21.43■■□□□ 1.02
CCDC78-203ENST00000423653 CNOT7Q9UIV1 285 aaKnown RBP21.43■■□□□ 1.02
CCDC78-203ENST00000423653 VAMP4O75379 141 aa21.42■■□□□ 1.02
CCDC78-203ENST00000423653 LINS1Q8NG48 757 aa21.42■■□□□ 1.02
CCDC78-203ENST00000423653 TTLL11Q8NHH1 800 aa21.42■■□□□ 1.02
CCDC78-203ENST00000423653 VEGFBP49765 207 aa21.41■■□□□ 1.02
CCDC78-203ENST00000423653 GCKRQ14397 625 aa21.41■■□□□ 1.02
CCDC78-203ENST00000423653 DOK7Q18PE1 504 aa21.41■■□□□ 1.02
CCDC78-203ENST00000423653 GPR101Q96P66 508 aaPredicted RBP21.41■■□□□ 1.02
CCDC78-203ENST00000423653 H7C1W4 665 aa21.4■■□□□ 1.02
CCDC78-203ENST00000423653 ATP2B4P23634 1241 aa21.4■■□□□ 1.02
CCDC78-203ENST00000423653 DEFB115Q30KQ5 88 aa21.4■■□□□ 1.02
CCDC78-203ENST00000423653 TRPM4Q8TD43 1214 aa21.4■■□□□ 1.02
CCDC78-203ENST00000423653 GREM2Q9H772 168 aa21.4■■□□□ 1.02
CCDC78-203ENST00000423653 PSME4Q14997 1843 aa21.39■■□□□ 1.02
CCDC78-203ENST00000423653 PLA2G12BQ9BX93 195 aa21.39■■□□□ 1.01
CCDC78-203ENST00000423653 BSDC1Q9NW68 430 aaPredicted RBP21.39■■□□□ 1.01
CCDC78-203ENST00000423653 PGAP2Q9UHJ9 254 aa21.39■■□□□ 1.01
CCDC78-203ENST00000423653 ZBTB12Q9Y330 459 aaPredicted RBP21.39■■□□□ 1.01
CCDC78-203ENST00000423653 ZNF609O15014 1411 aa21.38■■□□□ 1.01
CCDC78-203ENST00000423653 SCN9AQ15858 1988 aa21.38■■□□□ 1.01
CCDC78-203ENST00000423653 THSD7BQ9C0I4 1608 aa21.38■■□□□ 1.01
CCDC78-203ENST00000423653 TRAF5O00463 557 aa21.38■■□□□ 1.01
CCDC78-203ENST00000423653 IGHMBP2P38935 993 aaKnown RBP21.38■■□□□ 1.01
CCDC78-203ENST00000423653 AIDAQ96BJ3 306 aa21.38■■□□□ 1.01
CCDC78-203ENST00000423653 MED23Q9ULK4 1368 aa21.37■■□□□ 1.01
CCDC78-203ENST00000423653 COL13A1Q5TAT6 717 aaPredicted RBP21.37■■□□□ 1.01
CCDC78-203ENST00000423653 SPINK5Q9NQ38 1064 aaPredicted RBP21.37■■□□□ 1.01
CCDC78-203ENST00000423653 SHTN1A0MZ66 631 aa21.36■■□□□ 1.01
CCDC78-203ENST00000423653 ECE1P42892 770 aa21.36■■□□□ 1.01
CCDC78-203ENST00000423653 CDC37L1Q7L3B6 337 aa21.36■■□□□ 1.01
CCDC78-203ENST00000423653 GLIS2Q9BZE0 524 aaPredicted RBP21.36■■□□□ 1.01
CCDC78-203ENST00000423653 CELF2O95319 508 aaKnown RBP21.35■■□□□ 1.01
CCDC78-203ENST00000423653 VIL1P09327 827 aaKnown RBP21.35■■□□□ 1.01
CCDC78-203ENST00000423653 ITGA6P23229 1130 aa21.35■■□□□ 1.01
CCDC78-203ENST00000423653 HIRAP54198 1017 aaPredicted RBP21.35■■□□□ 1.01
CCDC78-203ENST00000423653 CASP7P55210 303 aa21.35■■□□□ 1.01
CCDC78-203ENST00000423653 FMR1Q06787 632 aaKnown RBP eCLIP21.35■■□□□ 1.01
CCDC78-203ENST00000423653 FAM161AQ3B820 660 aa21.35■■□□□ 1.01
CCDC78-203ENST00000423653 PAXIP1Q6ZW49 1069 aaPredicted RBP21.35■■□□□ 1.01
CCDC78-203ENST00000423653 TLL2Q9Y6L7 1015 aa21.35■■□□□ 1.01
CCDC78-203ENST00000423653 WDR33Q9C0J8 1336 aaKnown RBP21.34■■□□□ 1.01
CCDC78-203ENST00000423653 TBC1D10BQ4KMP7 808 aaPredicted RBP21.34■■□□□ 1.01
CCDC78-203ENST00000423653 CST9Q5W186 159 aa21.34■■□□□ 1.01
CCDC78-203ENST00000423653 SAMD7Q7Z3H4 446 aa21.34■■□□□ 1.01
CCDC78-203ENST00000423653 AGBL3Q8NEM8 1001 aa21.34■■□□□ 1.01
CCDC78-203ENST00000423653 MPHOSPH8Q99549 860 aa21.34■■□□□ 1.01
CCDC78-203ENST00000423653 KCNQ5Q9NR82 932 aa21.34■■□□□ 1.01
CCDC78-203ENST00000423653 MINPP1Q9UNW1 487 aa21.34■■□□□ 1.01
CCDC78-203ENST00000423653 CCT4P50991 539 aaKnown RBP21.33■■□□□ 1.01
CCDC78-203ENST00000423653 KIF4BQ2VIQ3 1234 aa21.33■■□□□ 1.01
CCDC78-203ENST00000423653 PODNQ7Z5L7 613 aa21.33■■□□□ 1.01
CCDC78-203ENST00000423653 TNS4Q8IZW8 715 aa21.33■■□□□ 1.01
CCDC78-203ENST00000423653 CAPNS2Q96L46 248 aa21.33■■□□□ 1.01
CCDC78-203ENST00000423653 ZNF521Q96K83 1311 aa21.32■■□□□ 1
CCDC78-203ENST00000423653 F6X3S4 739 aa21.32■■□□□ 1
CCDC78-203ENST00000423653 MAP2K1Q02750 393 aaPredicted RBP21.32■■□□□ 1
CCDC78-203ENST00000423653 RSBN1LQ6PCB5 846 aaPredicted RBP21.32■■□□□ 1
CCDC78-203ENST00000423653 ANKRD2Q9GZV1 360 aa21.32■■□□□ 1
CCDC78-203ENST00000423653 ZNF408Q9H9D4 720 aa21.32■■□□□ 1
CCDC78-203ENST00000423653 ANKRD18BA2A2Z9 1011 aa21.31■■□□□ 1
CCDC78-203ENST00000423653 CSF1RP07333 972 aa21.31■■□□□ 1
CCDC78-203ENST00000423653 CTCFP49711 727 aaPredicted RBP21.31■■□□□ 1
CCDC78-203ENST00000423653 BEND3Q5T5X7 828 aa21.31■■□□□ 1
CCDC78-203ENST00000423653 KRT26Q7Z3Y9 468 aa21.31■■□□□ 1
CCDC78-203ENST00000423653 DCPSQ96C86 337 aaKnown RBP21.31■■□□□ 1
CCDC78-203ENST00000423653 HHIPL1Q96JK4 782 aa21.31■■□□□ 1
CCDC78-203ENST00000423653 LEMD3Q9Y2U8 911 aa21.31■■□□□ 1
CCDC78-203ENST00000423653 USP17L3A6NCW0 530 aa21.3■■□□□ 1
CCDC78-203ENST00000423653 USP17L4A6NCW7 530 aa21.3■■□□□ 1
CCDC78-203ENST00000423653 FOXN1O15353 648 aa21.3■■□□□ 1
CCDC78-203ENST00000423653 USP17L1Q7RTZ2 530 aa21.3■■□□□ 1
CCDC78-203ENST00000423653 SAPCD2Q86UD0 394 aa21.3■■□□□ 1
CCDC78-203ENST00000423653 WBP1LQ9NX94 342 aa21.3■■□□□ 1
CCDC78-203ENST00000423653 EGFRP00533 1210 aa21.29■■□□□ 1
CCDC78-203ENST00000423653 ZNF280AP59817 542 aaPredicted RBP21.29■■□□□ 1
CCDC78-203ENST00000423653 IFIT5Q13325 482 aaKnown RBP21.29■■□□□ 1
CCDC78-203ENST00000423653 RBM26Q5T8P6 1007 aaKnown RBP21.29■■□□□ 1
CCDC78-203ENST00000423653 COA1Q9GZY4 146 aa21.29■■□□□ 1
CCDC78-203ENST00000423653 MYO3BQ8WXR4 1341 aa21.29■■□□□ 1
CCDC78-203ENST00000423653 GRM8O00222 908 aa21.28■■□□□ 1
CCDC78-203ENST00000423653 ALDH1L1O75891 902 aa21.28■■□□□ 1
CCDC78-203ENST00000423653 KCNJ4P48050 445 aa21.28■■□□□ 1
CCDC78-203ENST00000423653 GRM1Q13255 1194 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms