RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 IQCA1LA6NCM1 817 aa13.82□□□□□ -0.2
USP49-204ENST00000423567 DDNO94850 711 aaPredicted RBP13.82□□□□□ -0.2
USP49-204ENST00000423567 IGHMBP2P38935 993 aaKnown RBP13.82□□□□□ -0.2
USP49-204ENST00000423567 KIAA2012Q0VF49 1180 aa13.82□□□□□ -0.2
USP49-204ENST00000423567 CHMP3Q9Y3E7 222 aa13.82□□□□□ -0.2
USP49-204ENST00000423567 ZNF541Q9H0D2 1346 aa13.82□□□□□ -0.2
USP49-204ENST00000423567 GPSM2P81274 684 aa13.81□□□□□ -0.2
USP49-204ENST00000423567 WASHC4Q2M389 1173 aa13.81□□□□□ -0.2
USP49-204ENST00000423567 GPC2Q8N158 579 aa13.81□□□□□ -0.2
USP49-204ENST00000423567 RBM46Q8TBY0 533 aaKnown RBP13.81□□□□□ -0.2
USP49-204ENST00000423567 MPHOSPH8Q99549 860 aa13.81□□□□□ -0.2
USP49-204ENST00000423567 API5Q9BZZ5 524 aaKnown RBP13.81□□□□□ -0.2
USP49-204ENST00000423567 GGA1Q9UJY5 639 aa13.81□□□□□ -0.2
USP49-204ENST00000423567 ZNRF3Q9ULT6 936 aa13.81□□□□□ -0.2
USP49-204ENST00000423567 ZBED9Q6R2W3 1325 aa13.81□□□□□ -0.2
USP49-204ENST00000423567 KIF16BQ96L93 1317 aa13.81□□□□□ -0.2
USP49-204ENST00000423567 CCDC88AQ3V6T2 1871 aa13.8□□□□□ -0.2
USP49-204ENST00000423567 DICER1Q9UPY3 1922 aaKnown RBP13.8□□□□□ -0.2
USP49-204ENST00000423567 ANKRD18BA2A2Z9 1011 aa13.8□□□□□ -0.2
USP49-204ENST00000423567 UFL1O94874 794 aa13.8□□□□□ -0.2
USP49-204ENST00000423567 CSF1RP07333 972 aa13.8□□□□□ -0.2
USP49-204ENST00000423567 ITGA6P23229 1130 aa13.8□□□□□ -0.2
USP49-204ENST00000423567 RARSP54136 660 aaKnown RBP13.8□□□□□ -0.2
USP49-204ENST00000423567 BRPF1P55201 1214 aaPredicted RBP13.8□□□□□ -0.2
USP49-204ENST00000423567 IFIT5Q13325 482 aaKnown RBP13.8□□□□□ -0.2
USP49-204ENST00000423567 FAM161AQ3B820 660 aa13.8□□□□□ -0.2
USP49-204ENST00000423567 L3MBTL3Q96JM7 780 aaPredicted RBP13.8□□□□□ -0.2
USP49-204ENST00000423567 BSDC1Q9NW68 430 aaPredicted RBP13.8□□□□□ -0.2
USP49-204ENST00000423567 PODXL2Q9NZ53 605 aa13.8□□□□□ -0.2
USP49-204ENST00000423567 NOB1Q9ULX3 412 aaKnown RBP13.8□□□□□ -0.2
USP49-204ENST00000423567 GJA3Q9Y6H8 435 aa13.8□□□□□ -0.2
USP49-204ENST00000423567 XDHP47989 1333 aa13.8□□□□□ -0.2
USP49-204ENST00000423567 G3V3G9 751 aa13.79□□□□□ -0.2
USP49-204ENST00000423567 LMOD1P29536 600 aaPredicted RBP13.79□□□□□ -0.2
USP49-204ENST00000423567 DCAF8Q5TAQ9 597 aa13.79□□□□□ -0.2
USP49-204ENST00000423567 TBC1D16Q8TBP0 767 aa13.79□□□□□ -0.2
USP49-204ENST00000423567 ZC3H12CQ9C0D7 883 aaKnown RBP13.79□□□□□ -0.2
USP49-204ENST00000423567 RIMBP2O15034 1052 aa13.78□□□□□ -0.2
USP49-204ENST00000423567 IPO8O15397 1037 aaKnown RBP13.78□□□□□ -0.2
USP49-204ENST00000423567 ATP2B4P23634 1241 aa13.78□□□□□ -0.2
USP49-204ENST00000423567 CCT4P50991 539 aaKnown RBP13.78□□□□□ -0.2
USP49-204ENST00000423567 FSTL1Q12841 308 aa13.78□□□□□ -0.2
USP49-204ENST00000423567 CCDC57Q2TAC2 916 aa13.78□□□□□ -0.2
USP49-204ENST00000423567 TAF7LQ5H9L4 462 aa13.78□□□□□ -0.2
USP49-204ENST00000423567 LMBR1LQ6UX01 489 aa13.78□□□□□ -0.2
USP49-204ENST00000423567 SMC1BQ8NDV3 1235 aa13.78□□□□□ -0.2
USP49-204ENST00000423567 POLLQ9UGP5 575 aa13.78□□□□□ -0.2
USP49-204ENST00000423567 HACL1Q9UJ83 578 aa13.78□□□□□ -0.2
USP49-204ENST00000423567 LRRC37AA6NMS7 1700 aa13.77□□□□□ -0.21
USP49-204ENST00000423567 NBPF7P0C2Y1 421 aaPredicted RBP13.77□□□□□ -0.21
USP49-204ENST00000423567 FOXO4P98177 505 aa13.77□□□□□ -0.21
USP49-204ENST00000423567 TNIP1Q15025 636 aa13.77□□□□□ -0.21
USP49-204ENST00000423567 CIAPIN1Q6FI81 312 aa13.77□□□□□ -0.21
USP49-204ENST00000423567 ARHGAP45Q92619 1136 aa13.77□□□□□ -0.21
USP49-204ENST00000423567 WDR90Q96KV7 1748 aa13.77□□□□□ -0.21
USP49-204ENST00000423567 ANKRD2Q9GZV1 360 aa13.77□□□□□ -0.21
USP49-204ENST00000423567 TAF1P21675 1872 aa13.76□□□□□ -0.21
USP49-204ENST00000423567 UTYO14607 1347 aa13.76□□□□□ -0.21
USP49-204ENST00000423567 POTECB2RU33 542 aa13.76□□□□□ -0.21
USP49-204ENST00000423567 SUCLG2Q96I99 432 aa13.76□□□□□ -0.21
USP49-204ENST00000423567 MINPP1Q9UNW1 487 aa13.76□□□□□ -0.21
USP49-204ENST00000423567 HDAC5Q9UQL6 1122 aa13.76□□□□□ -0.21
USP49-204ENST00000423567 COL4A5P29400 1685 aa13.75□□□□□ -0.21
USP49-204ENST00000423567 ECE2O60344 883 aa13.75□□□□□ -0.21
USP49-204ENST00000423567 RAD17O75943 681 aa13.75□□□□□ -0.21
USP49-204ENST00000423567 HSPA6P17066 643 aa13.75□□□□□ -0.21
USP49-204ENST00000423567 EPHX2P34913 555 aa13.75□□□□□ -0.21
USP49-204ENST00000423567 KCNJ4P48050 445 aa13.75□□□□□ -0.21
USP49-204ENST00000423567 CXCL9Q07325 125 aa13.75□□□□□ -0.21
USP49-204ENST00000423567 EPHA10Q5JZY3 1008 aa13.75□□□□□ -0.21
USP49-204ENST00000423567 PNMA8AQ86V59 439 aaPredicted RBP13.75□□□□□ -0.21
USP49-204ENST00000423567 SP7Q8TDD2 431 aaPredicted RBP13.75□□□□□ -0.21
USP49-204ENST00000423567 FRAT1Q92837 279 aaPredicted RBP13.75□□□□□ -0.21
USP49-204ENST00000423567 TAF1DQ9H5J8 278 aaPredicted RBP13.75□□□□□ -0.21
USP49-204ENST00000423567 DBNDD1Q9H9R9 158 aa13.75□□□□□ -0.21
USP49-204ENST00000423567 CREBZFQ9NS37 354 aa13.75□□□□□ -0.21
USP49-204ENST00000423567 COL4A1P02462 1669 aa13.75□□□□□ -0.21
USP49-204ENST00000423567 DUOX1Q9NRD9 1551 aa13.75□□□□□ -0.21
USP49-204ENST00000423567 MYH3P11055 1940 aa13.74□□□□□ -0.21
USP49-204ENST00000423567 DOK7Q18PE1 504 aa13.74□□□□□ -0.21
USP49-204ENST00000423567 EAPPQ56P03 285 aaPredicted RBP13.74□□□□□ -0.21
USP49-204ENST00000423567 GPR101Q96P66 508 aaPredicted RBP13.74□□□□□ -0.21
USP49-204ENST00000423567 USP44Q9H0E7 712 aa13.74□□□□□ -0.21
USP49-204ENST00000423567 CNNM1Q9NRU3 951 aa13.74□□□□□ -0.21
USP49-204ENST00000423567 LEMD3Q9Y2U8 911 aa13.74□□□□□ -0.21
USP49-204ENST00000423567 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
USP49-204ENST00000423567 UBTFL1P0CB47 393 aaPredicted RBP13.73□□□□□ -0.21
USP49-204ENST00000423567 EVX2Q03828 476 aa13.73□□□□□ -0.21
USP49-204ENST00000423567 CHRNDQ07001 517 aa13.73□□□□□ -0.21
USP49-204ENST00000423567 LDHAL6AQ6ZMR3 332 aa13.73□□□□□ -0.21
USP49-204ENST00000423567 LDHDQ86WU2 507 aa13.73□□□□□ -0.21
USP49-204ENST00000423567 BICC1Q9H694 974 aaKnown RBP13.73□□□□□ -0.21
USP49-204ENST00000423567 MED23Q9ULK4 1368 aa13.72□□□□□ -0.21
USP49-204ENST00000423567 ZNF804BA4D1E1 1349 aa13.72□□□□□ -0.21
USP49-204ENST00000423567 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
USP49-204ENST00000423567 YDJCA8MPS7 323 aa13.72□□□□□ -0.21
USP49-204ENST00000423567 BCAR3O75815 825 aa13.72□□□□□ -0.21
USP49-204ENST00000423567 GMPSP49915 693 aaPredicted RBP13.72□□□□□ -0.21
USP49-204ENST00000423567 SCNN1DP51172 638 aa13.72□□□□□ -0.21
USP49-204ENST00000423567 APLP1P51693 650 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms