RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 FHOD3Q2V2M9 1422 aa9.11□□□□□ -0.95
LINC00458-201ENST00000423442 AKNAQ7Z591 1439 aa9.11□□□□□ -0.95
LINC00458-201ENST00000423442 YEATS2Q9ULM3 1422 aa9.11□□□□□ -0.95
LINC00458-201ENST00000423442 TTC37Q6PGP7 1564 aa9.11□□□□□ -0.95
LINC00458-201ENST00000423442 STRCQ7RTU9 1775 aa9.1□□□□□ -0.95
LINC00458-201ENST00000423442 CEBPAP49715 358 aaPredicted RBP9.1□□□□□ -0.95
LINC00458-201ENST00000423442 AFF1P51825 1210 aaKnown RBP9.1□□□□□ -0.95
LINC00458-201ENST00000423442 ARTNQ5T4W7 220 aa9.1□□□□□ -0.95
LINC00458-201ENST00000423442 PSAPL1Q6NUJ1 521 aa9.1□□□□□ -0.95
LINC00458-201ENST00000423442 TFIP11Q9UBB9 837 aaKnown RBP9.1□□□□□ -0.95
LINC00458-201ENST00000423442 BCS1LQ9Y276 419 aa9.1□□□□□ -0.95
LINC00458-201ENST00000423442 PREX1Q8TCU6 1659 aa9.1□□□□□ -0.95
LINC00458-201ENST00000423442 RAPGEF6Q8TEU7 1601 aa9.09□□□□□ -0.95
LINC00458-201ENST00000423442 NFKB1P19838 968 aa9.09□□□□□ -0.95
LINC00458-201ENST00000423442 SEC13P55735 322 aa9.09□□□□□ -0.95
LINC00458-201ENST00000423442 RAC1P63000 192 aa9.09□□□□□ -0.95
LINC00458-201ENST00000423442 KRTAP1-3Q8IUG1 177 aa9.09□□□□□ -0.95
LINC00458-201ENST00000423442 DMRTC2Q8IXT2 367 aaPredicted RBP9.09□□□□□ -0.95
LINC00458-201ENST00000423442 ZFP64Q9NPA5 681 aa9.09□□□□□ -0.95
LINC00458-201ENST00000423442 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.09□□□□□ -0.95
LINC00458-201ENST00000423442 ZFYVE16Q7Z3T8 1539 aa9.09□□□□□ -0.95
LINC00458-201ENST00000423442 HIF1AQ16665 826 aa9.08□□□□□ -0.96
LINC00458-201ENST00000423442 TXNRD3Q86VQ6 643 aa9.08□□□□□ -0.96
LINC00458-201ENST00000423442 LENG1Q96BZ8 264 aaPredicted RBP9.08□□□□□ -0.96
LINC00458-201ENST00000423442 PNMA5Q96PV4 448 aa9.08□□□□□ -0.96
LINC00458-201ENST00000423442 HINFPQ9BQA5 517 aa9.08□□□□□ -0.96
LINC00458-201ENST00000423442 DMGDHQ9UI17 866 aaKnown RBP9.08□□□□□ -0.96
LINC00458-201ENST00000423442 MAFBQ9Y5Q3 323 aaPredicted RBP9.08□□□□□ -0.96
LINC00458-201ENST00000423442 EFCAB5A4FU69 1503 aa9.08□□□□□ -0.96
LINC00458-201ENST00000423442 ZMYM4Q5VZL5 1548 aa9.08□□□□□ -0.96
LINC00458-201ENST00000423442 HECW1Q76N89 1606 aa9.07□□□□□ -0.96
LINC00458-201ENST00000423442 GRNP28799 593 aaKnown RBP9.07□□□□□ -0.96
LINC00458-201ENST00000423442 CCINQ13939 588 aa9.07□□□□□ -0.96
LINC00458-201ENST00000423442 RTN1Q16799 776 aa9.07□□□□□ -0.96
LINC00458-201ENST00000423442 GLMNQ92990 594 aa9.07□□□□□ -0.96
LINC00458-201ENST00000423442 CFAP74Q9C0B2 1584 aa9.07□□□□□ -0.96
LINC00458-201ENST00000423442 PLEKHD1A6NEE1 506 aa9.06□□□□□ -0.96
LINC00458-201ENST00000423442 TGFBR3LH3BV60 316 aa9.06□□□□□ -0.96
LINC00458-201ENST00000423442 RGS9O75916 674 aaPredicted RBP9.06□□□□□ -0.96
LINC00458-201ENST00000423442 IER5Q5VY09 327 aa9.06□□□□□ -0.96
LINC00458-201ENST00000423442 FMR1NBQ8N0W7 255 aaPredicted RBP9.06□□□□□ -0.96
LINC00458-201ENST00000423442 CLUAP1Q96AJ1 413 aa9.06□□□□□ -0.96
LINC00458-201ENST00000423442 NUP153P49790 1475 aaKnown RBP9.06□□□□□ -0.96
LINC00458-201ENST00000423442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.05□□□□□ -0.96
LINC00458-201ENST00000423442 ARHGEF12Q9NZN5 1544 aa9.05□□□□□ -0.96
LINC00458-201ENST00000423442 SAMD9Q5K651 1589 aa9.05□□□□□ -0.96
LINC00458-201ENST00000423442 MAGI2Q86UL8 1455 aa9.05□□□□□ -0.96
LINC00458-201ENST00000423442 H2AFB1P0C5Y9 115 aa9.05□□□□□ -0.96
LINC00458-201ENST00000423442 H2AFB2P0C5Z0 115 aa9.05□□□□□ -0.96
LINC00458-201ENST00000423442 NRG1Q02297 640 aaPredicted RBP9.05□□□□□ -0.96
LINC00458-201ENST00000423442 CRTC2Q53ET0 693 aaPredicted RBP9.05□□□□□ -0.96
LINC00458-201ENST00000423442 EFCC1Q9HA90 598 aa9.05□□□□□ -0.96
LINC00458-201ENST00000423442 KLK14Q9P0G3 267 aa9.05□□□□□ -0.96
LINC00458-201ENST00000423442 USP21Q9UK80 565 aa9.05□□□□□ -0.96
LINC00458-201ENST00000423442 CPB1P15086 417 aa9.04□□□□□ -0.96
LINC00458-201ENST00000423442 DPYDQ12882 1025 aa9.04□□□□□ -0.96
LINC00458-201ENST00000423442 LARP1Q6PKG0 1096 aaKnown RBP9.04□□□□□ -0.96
LINC00458-201ENST00000423442 FAM35AQ86V20 835 aa9.04□□□□□ -0.96
LINC00458-201ENST00000423442 TP53INP1Q96A56 240 aa9.04□□□□□ -0.96
LINC00458-201ENST00000423442 KRTAP4-12Q9BQ66 201 aa9.04□□□□□ -0.96
LINC00458-201ENST00000423442 LTBP4Q8N2S1 1624 aa9.03□□□□□ -0.96
LINC00458-201ENST00000423442 PLAURQ03405 335 aa9.03□□□□□ -0.96
LINC00458-201ENST00000423442 PTK7Q13308 1070 aa9.03□□□□□ -0.96
LINC00458-201ENST00000423442 KRT25Q7Z3Z0 450 aa9.03□□□□□ -0.96
LINC00458-201ENST00000423442 ZFATQ9P243 1243 aa9.03□□□□□ -0.96
LINC00458-201ENST00000423442 PTPRTO14522 1441 aa9.03□□□□□ -0.96
LINC00458-201ENST00000423442 UHRF1BP1Q6BDS2 1440 aa9.03□□□□□ -0.96
LINC00458-201ENST00000423442 SCAPERQ9BY12 1400 aa9.03□□□□□ -0.96
LINC00458-201ENST00000423442 ATP10AO60312 1499 aa9.02□□□□□ -0.96
LINC00458-201ENST00000423442 ZBTB42B2RXF5 422 aa9.02□□□□□ -0.97
LINC00458-201ENST00000423442 INPP5BP32019 993 aa9.02□□□□□ -0.97
LINC00458-201ENST00000423442 IDH3AP50213 366 aa9.02□□□□□ -0.97
LINC00458-201ENST00000423442 MSL1Q68DK7 614 aa9.02□□□□□ -0.97
LINC00458-201ENST00000423442 FNBP4Q8N3X1 1017 aaPredicted RBP9.02□□□□□ -0.97
LINC00458-201ENST00000423442 SSBP4Q9BWG4 385 aaPredicted RBP9.02□□□□□ -0.97
LINC00458-201ENST00000423442 SETD1BQ9UPS6 1966 aaKnown RBP9.01□□□□□ -0.97
LINC00458-201ENST00000423442 IGFBP4P22692 258 aa9.01□□□□□ -0.97
LINC00458-201ENST00000423442 MLLT1Q03111 559 aaPredicted RBP9.01□□□□□ -0.97
LINC00458-201ENST00000423442 GRIK5Q16478 980 aa9.01□□□□□ -0.97
LINC00458-201ENST00000423442 PERM1Q5SV97 790 aa9.01□□□□□ -0.97
LINC00458-201ENST00000423442 KANK4Q5T7N3 995 aaPredicted RBP9.01□□□□□ -0.97
LINC00458-201ENST00000423442 C9orf84Q5VXU9 1444 aa9.01□□□□□ -0.97
LINC00458-201ENST00000423442 LPIN3Q9BQK8 851 aa9.01□□□□□ -0.97
LINC00458-201ENST00000423442 TARSP26639 723 aaKnown RBP9□□□□□ -0.97
LINC00458-201ENST00000423442 LCE3BQ5TA77 95 aa9□□□□□ -0.97
LINC00458-201ENST00000423442 NBPF11Q86T75 865 aa9□□□□□ -0.97
LINC00458-201ENST00000423442 PROSER2Q86WR7 435 aaPredicted RBP9□□□□□ -0.97
LINC00458-201ENST00000423442 IQSEC2Q5JU85 1478 aa9□□□□□ -0.97
LINC00458-201ENST00000423442 MAP3K6O95382 1288 aa8.99□□□□□ -0.97
LINC00458-201ENST00000423442 EPB42P16452 691 aa8.99□□□□□ -0.97
LINC00458-201ENST00000423442 DGKZQ13574 1117 aa8.99□□□□□ -0.97
LINC00458-201ENST00000423442 DHX32Q7L7V1 743 aaKnown RBP8.99□□□□□ -0.97
LINC00458-201ENST00000423442 IFT43Q96FT9 208 aa8.99□□□□□ -0.97
LINC00458-201ENST00000423442 PPP1R12CQ9BZL4 782 aa8.99□□□□□ -0.97
LINC00458-201ENST00000423442 PLCH2O75038 1416 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 C3P01024 1663 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 USP17L15C9J2P7 530 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 USP17L10C9JJH3 530 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 USP17L13C9JLJ4 530 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 USP17L12C9JPN9 530 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms