RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ANKRD18AQ8IVF6 992 aa19.41■□□□□ 0.7
USB1-202ENST00000423271 BCL2L13Q9BXK5 485 aa19.41■□□□□ 0.7
USB1-202ENST00000423271 GREM2Q9H772 168 aa19.41■□□□□ 0.7
USB1-202ENST00000423271 ADARB2Q9NS39 739 aaKnown RBP19.41■□□□□ 0.7
USB1-202ENST00000423271 PODXL2Q9NZ53 605 aa19.41■□□□□ 0.7
USB1-202ENST00000423271 ZNF521Q96K83 1311 aa19.41■□□□□ 0.7
USB1-202ENST00000423271 SCN9AQ15858 1988 aa19.41■□□□□ 0.7
USB1-202ENST00000423271 TMEM88BA6NKF7 163 aa19.4■□□□□ 0.7
USB1-202ENST00000423271 ECE2O60344 883 aa19.4■□□□□ 0.7
USB1-202ENST00000423271 FMR1Q06787 632 aaKnown RBP eCLIP19.4■□□□□ 0.7
USB1-202ENST00000423271 EYA3Q99504 573 aa19.4■□□□□ 0.7
USB1-202ENST00000423271 KCNQ5Q9NR82 932 aa19.4■□□□□ 0.7
USB1-202ENST00000423271 ANKIB1Q9P2G1 1089 aa19.4■□□□□ 0.7
USB1-202ENST00000423271 CNTNAP1P78357 1384 aa19.4■□□□□ 0.7
USB1-202ENST00000423271 F6X3S4 739 aa19.39■□□□□ 0.69
USB1-202ENST00000423271 PSMD14O00487 310 aa19.39■□□□□ 0.69
USB1-202ENST00000423271 CASP7P55210 303 aa19.39■□□□□ 0.69
USB1-202ENST00000423271 GGA1Q9UJY5 639 aa19.39■□□□□ 0.69
USB1-202ENST00000423271 ZBTB12Q9Y330 459 aaPredicted RBP19.39■□□□□ 0.69
USB1-202ENST00000423271 RTL9Q8NET4 1388 aa19.39■□□□□ 0.69
USB1-202ENST00000423271 LINS1Q8NG48 757 aa19.38■□□□□ 0.69
USB1-202ENST00000423271 TRPM4Q8TD43 1214 aa19.38■□□□□ 0.69
USB1-202ENST00000423271 CDC5LQ99459 802 aaKnown RBP19.38■□□□□ 0.69
USB1-202ENST00000423271 XDHP47989 1333 aa19.37■□□□□ 0.69
USB1-202ENST00000423271 TRAF5O00463 557 aa19.37■□□□□ 0.69
USB1-202ENST00000423271 HIRAP54198 1017 aaPredicted RBP19.37■□□□□ 0.69
USB1-202ENST00000423271 ZC3H12CQ9C0D7 883 aaKnown RBP19.37■□□□□ 0.69
USB1-202ENST00000423271 CNOT7Q9UIV1 285 aaKnown RBP19.37■□□□□ 0.69
USB1-202ENST00000423271 WTIPA6NIX2 430 aaPredicted RBP19.36■□□□□ 0.69
USB1-202ENST00000423271 HSPA1AP0DMV8 641 aaKnown RBP19.36■□□□□ 0.69
USB1-202ENST00000423271 HSPA1BP0DMV9 641 aaKnown RBP19.36■□□□□ 0.69
USB1-202ENST00000423271 FAM161AQ3B820 660 aa19.36■□□□□ 0.69
USB1-202ENST00000423271 MICALL2Q8IY33 904 aa19.36■□□□□ 0.69
USB1-202ENST00000423271 PLA2G12BQ9BX93 195 aa19.36■□□□□ 0.69
USB1-202ENST00000423271 TRPM7Q96QT4 1865 aa19.35■□□□□ 0.69
USB1-202ENST00000423271 BEND3Q5T5X7 828 aa19.34■□□□□ 0.69
USB1-202ENST00000423271 BSDC1Q9NW68 430 aaPredicted RBP19.34■□□□□ 0.69
USB1-202ENST00000423271 MINPP1Q9UNW1 487 aa19.34■□□□□ 0.69
USB1-202ENST00000423271 PSME4Q14997 1843 aa19.33■□□□□ 0.69
USB1-202ENST00000423271 H7C1D1 291 aa19.33■□□□□ 0.68
USB1-202ENST00000423271 ITGA6P23229 1130 aa19.33■□□□□ 0.68
USB1-202ENST00000423271 ATP2B4P23634 1241 aa19.33■□□□□ 0.68
USB1-202ENST00000423271 VEGFBP49765 207 aa19.33■□□□□ 0.68
USB1-202ENST00000423271 SAMD7Q7Z3H4 446 aa19.33■□□□□ 0.68
USB1-202ENST00000423271 DPF2Q92785 391 aa19.33■□□□□ 0.68
USB1-202ENST00000423271 GLIS2Q9BZE0 524 aaPredicted RBP19.33■□□□□ 0.68
USB1-202ENST00000423271 RASSF10A6NK89 507 aa19.32■□□□□ 0.68
USB1-202ENST00000423271 G3V3G9 751 aa19.32■□□□□ 0.68
USB1-202ENST00000423271 EGFRP00533 1210 aa19.32■□□□□ 0.68
USB1-202ENST00000423271 CSF1RP07333 972 aa19.32■□□□□ 0.68
USB1-202ENST00000423271 DCAF8Q5TAQ9 597 aa19.32■□□□□ 0.68
USB1-202ENST00000423271 PGAP2Q9UHJ9 254 aa19.32■□□□□ 0.68
USB1-202ENST00000423271 ABT1Q9ULW3 272 aaKnown RBP19.32■□□□□ 0.68
USB1-202ENST00000423271 VIL1P09327 827 aaKnown RBP19.31■□□□□ 0.68
USB1-202ENST00000423271 RPS12P25398 132 aaKnown RBP19.31■□□□□ 0.68
USB1-202ENST00000423271 IGHMBP2P38935 993 aaKnown RBP19.31■□□□□ 0.68
USB1-202ENST00000423271 TBC1D10BQ4KMP7 808 aaPredicted RBP19.31■□□□□ 0.68
USB1-202ENST00000423271 IFFO2Q5TF58 517 aa19.31■□□□□ 0.68
USB1-202ENST00000423271 CST9Q5W186 159 aa19.31■□□□□ 0.68
USB1-202ENST00000423271 MED23Q9ULK4 1368 aa19.31■□□□□ 0.68
USB1-202ENST00000423271 CCT4P50991 539 aaKnown RBP19.3■□□□□ 0.68
USB1-202ENST00000423271 FOXO4P98177 505 aa19.3■□□□□ 0.68
USB1-202ENST00000423271 DEFB115Q30KQ5 88 aa19.3■□□□□ 0.68
USB1-202ENST00000423271 COL13A1Q5TAT6 717 aaPredicted RBP19.3■□□□□ 0.68
USB1-202ENST00000423271 ZC3H15Q8WU90 426 aaKnown RBP19.3■□□□□ 0.68
USB1-202ENST00000423271 ZNF646O15015 1829 aaPredicted RBP19.28■□□□□ 0.68
USB1-202ENST00000423271 E9PSI1 815 aa19.28■□□□□ 0.68
USB1-202ENST00000423271 GRM8O00222 908 aa19.28■□□□□ 0.68
USB1-202ENST00000423271 CELF2O95319 508 aaKnown RBP19.28■□□□□ 0.68
USB1-202ENST00000423271 EPHA10Q5JZY3 1008 aa19.28■□□□□ 0.68
USB1-202ENST00000423271 RBM26Q5T8P6 1007 aaKnown RBP19.28■□□□□ 0.68
USB1-202ENST00000423271 SLC4A10Q6U841 1118 aa19.28■□□□□ 0.68
USB1-202ENST00000423271 DLK2Q6UY11 383 aa19.28■□□□□ 0.68
USB1-202ENST00000423271 ZNF609O15014 1411 aa19.27■□□□□ 0.68
USB1-202ENST00000423271 A0A1B0GUL6 1792 aa19.27■□□□□ 0.68
USB1-202ENST00000423271 POLR2AP24928 1970 aaKnown RBP19.27■□□□□ 0.68
USB1-202ENST00000423271 KLRK1P26718 216 aa19.27■□□□□ 0.68
USB1-202ENST00000423271 RSBN1LQ6PCB5 846 aaPredicted RBP19.27■□□□□ 0.68
USB1-202ENST00000423271 TXNRD3Q86VQ6 643 aa19.27■□□□□ 0.68
USB1-202ENST00000423271 MRPL50Q8N5N7 158 aaKnown RBP19.27■□□□□ 0.68
USB1-202ENST00000423271 CDCA7LQ96GN5 454 aa19.27■□□□□ 0.68
USB1-202ENST00000423271 MPHOSPH8Q99549 860 aa19.27■□□□□ 0.68
USB1-202ENST00000423271 CHMP3Q9Y3E7 222 aa19.27■□□□□ 0.68
USB1-202ENST00000423271 ANKRD18BA2A2Z9 1011 aa19.26■□□□□ 0.67
USB1-202ENST00000423271 SLFN5Q08AF3 891 aa19.26■□□□□ 0.67
USB1-202ENST00000423271 KIF4BQ2VIQ3 1234 aa19.26■□□□□ 0.67
USB1-202ENST00000423271 CDC37L1Q7L3B6 337 aa19.26■□□□□ 0.67
USB1-202ENST00000423271 PODNQ7Z5L7 613 aa19.26■□□□□ 0.67
USB1-202ENST00000423271 USP48Q86UV5 1035 aa19.26■□□□□ 0.67
USB1-202ENST00000423271 ZNF408Q9H9D4 720 aa19.26■□□□□ 0.67
USB1-202ENST00000423271 TLL2Q9Y6L7 1015 aa19.26■□□□□ 0.67
USB1-202ENST00000423271 WDR33Q9C0J8 1336 aaKnown RBP19.25■□□□□ 0.67
USB1-202ENST00000423271 USP17L3A6NCW0 530 aa19.25■□□□□ 0.67
USB1-202ENST00000423271 USP17L4A6NCW7 530 aa19.25■□□□□ 0.67
USB1-202ENST00000423271 ALDH1L1O75891 902 aa19.25■□□□□ 0.67
USB1-202ENST00000423271 CHRNDQ07001 517 aa19.25■□□□□ 0.67
USB1-202ENST00000423271 IFIT5Q13325 482 aaKnown RBP19.25■□□□□ 0.67
USB1-202ENST00000423271 LMBR1LQ6UX01 489 aa19.25■□□□□ 0.67
USB1-202ENST00000423271 PAXIP1Q6ZW49 1069 aaPredicted RBP19.25■□□□□ 0.67
USB1-202ENST00000423271 USP17L1Q7RTZ2 530 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms