RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 CCDC85AQ96PX6 553 aaPredicted RBP23.76■■□□□ 1.39
SREBF1-206ENST00000423161 PGAP2Q9UHJ9 254 aa23.76■■□□□ 1.39
SREBF1-206ENST00000423161 ZBTB12Q9Y330 459 aaPredicted RBP23.76■■□□□ 1.39
SREBF1-206ENST00000423161 DOK7Q18PE1 504 aa23.75■■□□□ 1.39
SREBF1-206ENST00000423161 PAXIP1Q6ZW49 1069 aaPredicted RBP23.75■■□□□ 1.39
SREBF1-206ENST00000423161 ZC3H15Q8WU90 426 aaKnown RBP23.75■■□□□ 1.39
SREBF1-206ENST00000423161 GLIS2Q9BZE0 524 aaPredicted RBP23.75■■□□□ 1.39
SREBF1-206ENST00000423161 WBP1LQ9NX94 342 aa23.75■■□□□ 1.39
SREBF1-206ENST00000423161 PODXL2Q9NZ53 605 aa23.75■■□□□ 1.39
SREBF1-206ENST00000423161 ANKIB1Q9P2G1 1089 aa23.75■■□□□ 1.39
SREBF1-206ENST00000423161 IL16Q14005 1332 aa23.75■■□□□ 1.39
SREBF1-206ENST00000423161 CAPN15O75808 1086 aa23.74■■□□□ 1.39
SREBF1-206ENST00000423161 UFL1O94874 794 aa23.74■■□□□ 1.39
SREBF1-206ENST00000423161 IGKV5-2P06315 115 aa23.74■■□□□ 1.39
SREBF1-206ENST00000423161 NEXNQ0ZGT2 675 aa23.74■■□□□ 1.39
SREBF1-206ENST00000423161 DPF2Q92785 391 aa23.74■■□□□ 1.39
SREBF1-206ENST00000423161 CTCFP49711 727 aaPredicted RBP23.73■■□□□ 1.39
SREBF1-206ENST00000423161 CAPNS2Q96L46 248 aa23.73■■□□□ 1.39
SREBF1-206ENST00000423161 ZC3H12CQ9C0D7 883 aaKnown RBP23.73■■□□□ 1.39
SREBF1-206ENST00000423161 GGA1Q9UJY5 639 aa23.73■■□□□ 1.39
SREBF1-206ENST00000423161 TLL2Q9Y6L7 1015 aa23.73■■□□□ 1.39
SREBF1-206ENST00000423161 RTL9Q8NET4 1388 aa23.73■■□□□ 1.39
SREBF1-206ENST00000423161 ANP32CO43423 234 aa23.72■■□□□ 1.39
SREBF1-206ENST00000423161 CELF2O95319 508 aaKnown RBP23.72■■□□□ 1.39
SREBF1-206ENST00000423161 ECE1P42892 770 aa23.72■■□□□ 1.39
SREBF1-206ENST00000423161 ANKRD18AQ8IVF6 992 aa23.72■■□□□ 1.39
SREBF1-206ENST00000423161 KCNQ5Q9NR82 932 aa23.72■■□□□ 1.39
SREBF1-206ENST00000423161 RPS12P25398 132 aaKnown RBP23.71■■□□□ 1.39
SREBF1-206ENST00000423161 CTSWP56202 376 aa23.71■■□□□ 1.39
SREBF1-206ENST00000423161 GRM1Q13255 1194 aa23.71■■□□□ 1.39
SREBF1-206ENST00000423161 NCBP3Q53F19 620 aaKnown RBP23.71■■□□□ 1.39
SREBF1-206ENST00000423161 CYP4F22Q6NT55 531 aa23.71■■□□□ 1.39
SREBF1-206ENST00000423161 G2E3Q7L622 706 aa23.71■■□□□ 1.39
SREBF1-206ENST00000423161 PRDM10Q9NQV6 1147 aa23.71■■□□□ 1.39
SREBF1-206ENST00000423161 G3V3G9 751 aa23.7■■□□□ 1.38
SREBF1-206ENST00000423161 SLC4A2P04920 1241 aa23.7■■□□□ 1.38
SREBF1-206ENST00000423161 MAP2K1Q02750 393 aaPredicted RBP23.7■■□□□ 1.38
SREBF1-206ENST00000423161 CWF19L2Q2TBE0 894 aaKnown RBP23.7■■□□□ 1.38
SREBF1-206ENST00000423161 DCAF8Q5TAQ9 597 aa23.7■■□□□ 1.38
SREBF1-206ENST00000423161 CDC37L1Q7L3B6 337 aa23.7■■□□□ 1.38
SREBF1-206ENST00000423161 SAMD7Q7Z3H4 446 aa23.7■■□□□ 1.38
SREBF1-206ENST00000423161 XDHP47989 1333 aa23.69■■□□□ 1.38
SREBF1-206ENST00000423161 FANCIQ9NVI1 1328 aa23.69■■□□□ 1.38
SREBF1-206ENST00000423161 ZNF316A6NFI3 1004 aaPredicted RBP23.69■■□□□ 1.38
SREBF1-206ENST00000423161 NEURL1BA8MQ27 555 aa23.69■■□□□ 1.38
SREBF1-206ENST00000423161 TBC1D10BQ4KMP7 808 aaPredicted RBP23.69■■□□□ 1.38
SREBF1-206ENST00000423161 CDC5LQ99459 802 aaKnown RBP23.69■■□□□ 1.38
SREBF1-206ENST00000423161 ZNF408Q9H9D4 720 aa23.69■■□□□ 1.38
SREBF1-206ENST00000423161 SAPCD2Q86UD0 394 aa23.68■■□□□ 1.38
SREBF1-206ENST00000423161 SALL2Q9Y467 1007 aaPredicted RBP23.68■■□□□ 1.38
SREBF1-206ENST00000423161 EGFRP00533 1210 aa23.67■■□□□ 1.38
SREBF1-206ENST00000423161 LBX1P52954 281 aa23.67■■□□□ 1.38
SREBF1-206ENST00000423161 FLIIQ13045 1269 aa23.67■■□□□ 1.38
SREBF1-206ENST00000423161 TTLL11Q8NHH1 800 aa23.67■■□□□ 1.38
SREBF1-206ENST00000423161 VIL1P09327 827 aaKnown RBP23.66■■□□□ 1.38
SREBF1-206ENST00000423161 RBM26Q5T8P6 1007 aaKnown RBP23.66■■□□□ 1.38
SREBF1-206ENST00000423161 UBE3BQ7Z3V4 1068 aa23.66■■□□□ 1.38
SREBF1-206ENST00000423161 USP48Q86UV5 1035 aa23.66■■□□□ 1.38
SREBF1-206ENST00000423161 GREM2Q9H772 168 aa23.66■■□□□ 1.38
SREBF1-206ENST00000423161 HSPA8P11142 646 aaKnown RBP23.65■■□□□ 1.38
SREBF1-206ENST00000423161 ATP2B4P23634 1241 aa23.65■■□□□ 1.38
SREBF1-206ENST00000423161 FKBP5Q13451 457 aaPredicted RBP23.65■■□□□ 1.38
SREBF1-206ENST00000423161 WDR63Q8IWG1 891 aa23.65■■□□□ 1.38
SREBF1-206ENST00000423161 H7C1W4 665 aa23.64■■□□□ 1.37
SREBF1-206ENST00000423161 KIF4BQ2VIQ3 1234 aa23.64■■□□□ 1.37
SREBF1-206ENST00000423161 HHIPL1Q96JK4 782 aa23.64■■□□□ 1.37
SREBF1-206ENST00000423161 BSDC1Q9NW68 430 aaPredicted RBP23.64■■□□□ 1.37
SREBF1-206ENST00000423161 ZNF609O15014 1411 aa23.63■■□□□ 1.37
SREBF1-206ENST00000423161 AOC2O75106 756 aa23.63■■□□□ 1.37
SREBF1-206ENST00000423161 GCKRQ14397 625 aa23.63■■□□□ 1.37
SREBF1-206ENST00000423161 KRT26Q7Z3Y9 468 aa23.63■■□□□ 1.37
SREBF1-206ENST00000423161 DNAAF4Q8WXU2 420 aa23.63■■□□□ 1.37
SREBF1-206ENST00000423161 BEGAINQ9BUH8 593 aa23.63■■□□□ 1.37
SREBF1-206ENST00000423161 ZNF646O15015 1829 aaPredicted RBP23.63■■□□□ 1.37
SREBF1-206ENST00000423161 DLK2Q6UY11 383 aa23.62■■□□□ 1.37
SREBF1-206ENST00000423161 DCPSQ96C86 337 aaKnown RBP23.62■■□□□ 1.37
SREBF1-206ENST00000423161 MYH16Q9H6N6 1097 aa23.62■■□□□ 1.37
SREBF1-206ENST00000423161 MINPP1Q9UNW1 487 aa23.62■■□□□ 1.37
SREBF1-206ENST00000423161 VAMP4O75379 141 aa23.61■■□□□ 1.37
SREBF1-206ENST00000423161 MAP2K2P36507 400 aa23.61■■□□□ 1.37
SREBF1-206ENST00000423161 EXOSC9Q06265 439 aaKnown RBP23.61■■□□□ 1.37
SREBF1-206ENST00000423161 RSBN1LQ6PCB5 846 aaPredicted RBP23.61■■□□□ 1.37
SREBF1-206ENST00000423161 AGBL3Q8NEM8 1001 aa23.61■■□□□ 1.37
SREBF1-206ENST00000423161 MED23Q9ULK4 1368 aa23.61■■□□□ 1.37
SREBF1-206ENST00000423161 LINS1Q8NG48 757 aa23.6■■□□□ 1.37
SREBF1-206ENST00000423161 PLA2G12BQ9BX93 195 aa23.6■■□□□ 1.37
SREBF1-206ENST00000423161 WTIPA6NIX2 430 aaPredicted RBP23.59■■□□□ 1.37
SREBF1-206ENST00000423161 ADM5C9JUS6 153 aa23.59■■□□□ 1.37
SREBF1-206ENST00000423161 IGHMBP2P38935 993 aaKnown RBP23.59■■□□□ 1.37
SREBF1-206ENST00000423161 CCT4P50991 539 aaKnown RBP23.59■■□□□ 1.37
SREBF1-206ENST00000423161 PODNQ7Z5L7 613 aa23.59■■□□□ 1.37
SREBF1-206ENST00000423161 GGA3Q9NZ52 723 aa23.59■■□□□ 1.37
SREBF1-206ENST00000423161 A0A1B0GUL6 1792 aa23.58■■□□□ 1.37
SREBF1-206ENST00000423161 USP17L3A6NCW0 530 aa23.58■■□□□ 1.37
SREBF1-206ENST00000423161 USP17L4A6NCW7 530 aa23.58■■□□□ 1.37
SREBF1-206ENST00000423161 CASP7P55210 303 aa23.58■■□□□ 1.37
SREBF1-206ENST00000423161 HUNKP57058 714 aa23.58■■□□□ 1.37
SREBF1-206ENST00000423161 ZNF280AP59817 542 aaPredicted RBP23.58■■□□□ 1.37
SREBF1-206ENST00000423161 USP17L1Q7RTZ2 530 aa23.58■■□□□ 1.37
SREBF1-206ENST00000423161 ITGA6P23229 1130 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms