RNA–Protein interactions for RNA: ENST00000423048.5

ALMS1-201, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 5,194 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-201ENST00000423048 HOOK2Q96ED9 719 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 DDX21Q9NR30 783 aaKnown RBP eCLIP8.18□□□□□ -1.1
ALMS1-201ENST00000423048 DAAM1Q9Y4D1 1078 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 EIF3DO15371 548 aaKnown RBP eCLIP8.18□□□□□ -1.1
ALMS1-201ENST00000423048 SSFA2P28290 1259 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 LUZP1Q86V48 1076 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 MRPS27Q92552 414 aaKnown RBP8.18□□□□□ -1.1
ALMS1-201ENST00000423048 CRACR2AQ9BSW2 395 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 ZNF330Q9Y3S2 320 aaPredicted RBP8.18□□□□□ -1.1
ALMS1-201ENST00000423048 GRM8O00222 908 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 SLC26A4O43511 780 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 OPA1O60313 960 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 KRT18P05783 430 aaKnown RBP8.18□□□□□ -1.1
ALMS1-201ENST00000423048 METTL24Q5JXM2 366 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 PPP4R3AQ6IN85 833 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 APBB1IPQ7Z5R6 666 aaPredicted RBP8.18□□□□□ -1.1
ALMS1-201ENST00000423048 SPATS2Q86XZ4 545 aaKnown RBP8.18□□□□□ -1.1
ALMS1-201ENST00000423048 CLSTN1O94985 981 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 IARSP41252 1262 aaKnown RBP8.18□□□□□ -1.1
ALMS1-201ENST00000423048 RCAN1P53805 252 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 TMC4Q7Z404 712 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 TEX2Q8IWB9 1127 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 ADGRB3O60242 1522 aa8.18□□□□□ -1.1
ALMS1-201ENST00000423048 hCG_1984214I3L0E3 225 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.17□□□□□ -1.1
ALMS1-201ENST00000423048 ZNF189O75820 626 aaPredicted RBP8.17□□□□□ -1.1
ALMS1-201ENST00000423048 F13A1P00488 732 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 FOXD4L1Q9NU39 408 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 PTCH1Q13635 1447 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 ABCC3O15438 1527 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 UQCRHLA0A096LP55 91 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 SOCS7O14512 581 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 MYL1P05976 194 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 UQCRHP07919 91 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 C8orf34Q49A92 452 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 NUTM2DQ5VT03 806 aaPredicted RBP8.17□□□□□ -1.1
ALMS1-201ENST00000423048 NOL8Q76FK4 1167 aaKnown RBP8.17□□□□□ -1.1
ALMS1-201ENST00000423048 ZNF592Q92610 1267 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 PXDNLA1KZ92 1463 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 DIP2AQ14689 1571 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 WDR19Q8NEZ3 1342 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 JAKMIP2Q96AA8 810 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 DSCC1Q9BVC3 393 aa8.17□□□□□ -1.1
ALMS1-201ENST00000423048 GBP1P32455 592 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 RILPL1Q5EBL4 403 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 NAP1L3Q99457 506 aaPredicted RBP8.16□□□□□ -1.1
ALMS1-201ENST00000423048 NSRP1Q9H0G5 558 aaKnown RBP8.16□□□□□ -1.1
ALMS1-201ENST00000423048 C19orf44Q9H6X5 657 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 POLKQ9UBT6 870 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 GOLGA8AA7E2F4 631 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 GOLGA8BA8MQT2 603 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 SEMA3EO15041 775 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 CDC25BP30305 580 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 ORC2Q13416 577 aaPredicted RBP8.16□□□□□ -1.1
ALMS1-201ENST00000423048 PDILTQ8N807 584 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 STAP2Q9UGK3 403 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 HLA-DOAP06340 250 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 CEP85Q6P2H3 762 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 CNGA4Q8IV77 575 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 TTC14Q96N46 770 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 ELP1O95163 1332 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 WDHD1O75717 1129 aaPredicted RBP8.16□□□□□ -1.1
ALMS1-201ENST00000423048 KIAA1328Q86T90 577 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 CCAR2Q8N163 923 aaKnown RBP8.16□□□□□ -1.1
ALMS1-201ENST00000423048 CLIP2Q9UDT6 1046 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 RASAL2Q9UJF2 1139 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 ZNF521Q96K83 1311 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 CCDC194A0A1B0GVG4 234 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 MAP4K4O95819 1239 aaPredicted RBP8.16□□□□□ -1.1
ALMS1-201ENST00000423048 KCNA6P17658 529 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 GABPB1Q06547 395 aaPredicted RBP8.16□□□□□ -1.1
ALMS1-201ENST00000423048 DHX32Q7L7V1 743 aaKnown RBP8.16□□□□□ -1.1
ALMS1-201ENST00000423048 SELENOOQ9BVL4 669 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 SH2D4AQ9H788 454 aa8.16□□□□□ -1.1
ALMS1-201ENST00000423048 ERVV-2B6SEH9 535 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 IL13P35225 146 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 ANKRD13DQ6ZTN6 518 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 C10orf67Q8IYJ2 551 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 FAM81BQ96LP2 452 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 LRP2BPQ9P2M1 347 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 LCMT1Q9UIC8 334 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 GLI2P10070 1586 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 NUTM2FA1L443 756 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 RNF113AO15541 343 aaKnown RBP8.15□□□□□ -1.1
ALMS1-201ENST00000423048 RAPGEF3O95398 923 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 GNA11P29992 359 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 PLCD1P51178 756 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 EIF5P55010 431 aaKnown RBP8.15□□□□□ -1.1
ALMS1-201ENST00000423048 NAP1L1P55209 391 aaKnown RBP8.15□□□□□ -1.1
ALMS1-201ENST00000423048 APBA1Q02410 837 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 SMC1AQ14683 1233 aaKnown RBP8.15□□□□□ -1.1
ALMS1-201ENST00000423048 NUTM2GQ5VZR2 741 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 SLC17A8Q8NDX2 589 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 TMX3Q96JJ7 454 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 DEPDC5O75140 1603 aa8.15□□□□□ -1.1
ALMS1-201ENST00000423048 PPP2R3AQ06190 1150 aa8.15□□□□□ -1.11
ALMS1-201ENST00000423048 KRT28Q7Z3Y7 464 aa8.15□□□□□ -1.11
ALMS1-201ENST00000423048 CNNM3Q8NE01 707 aa8.15□□□□□ -1.11
ALMS1-201ENST00000423048 PLBD2Q8NHP8 589 aa8.15□□□□□ -1.11
ALMS1-201ENST00000423048 LRRFIP2Q9Y608 721 aaKnown RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms