RNA–Protein interactions for RNA: ENST00000422939.1

TRPS1-204, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-204ENST00000422939 CD163Q86VB7 1156 aa10.71□□□□□ -0.69
TRPS1-204ENST00000422939 SMG9Q9H0W8 520 aaKnown RBP10.71□□□□□ -0.69
TRPS1-204ENST00000422939 ELP3Q9H9T3 547 aa10.71□□□□□ -0.69
TRPS1-204ENST00000422939 ABI2Q9NYB9 513 aaPredicted RBP10.71□□□□□ -0.69
TRPS1-204ENST00000422939 FAM229AH3BQW9 127 aa10.7□□□□□ -0.7
TRPS1-204ENST00000422939 GHRHP01286 108 aa10.7□□□□□ -0.7
TRPS1-204ENST00000422939 PROCP04070 461 aa10.7□□□□□ -0.7
TRPS1-204ENST00000422939 MSL1Q68DK7 614 aa10.7□□□□□ -0.7
TRPS1-204ENST00000422939 RBSNQ9H1K0 784 aa10.7□□□□□ -0.7
TRPS1-204ENST00000422939 A0A0A0MRY4 1105 aa10.69□□□□□ -0.7
TRPS1-204ENST00000422939 CHRNA4P43681 627 aa10.69□□□□□ -0.7
TRPS1-204ENST00000422939 AAMPQ13685 434 aa10.69□□□□□ -0.7
TRPS1-204ENST00000422939 ZNF438Q7Z4V0 828 aa10.69□□□□□ -0.7
TRPS1-204ENST00000422939 PLD4Q96BZ4 506 aa10.69□□□□□ -0.7
TRPS1-204ENST00000422939 GGNBP2Q9H3C7 697 aa10.69□□□□□ -0.7
TRPS1-204ENST00000422939 EGFL7Q9UHF1 273 aa10.69□□□□□ -0.7
TRPS1-204ENST00000422939 HYAL2Q12891 473 aa10.68□□□□□ -0.7
TRPS1-204ENST00000422939 DMRTC2Q8IXT2 367 aaPredicted RBP10.68□□□□□ -0.7
TRPS1-204ENST00000422939 TTC16Q8NEE8 873 aa10.68□□□□□ -0.7
TRPS1-204ENST00000422939 ANO2Q9NQ90 1003 aa10.68□□□□□ -0.7
TRPS1-204ENST00000422939 TMEM63CQ9P1W3 806 aa10.68□□□□□ -0.7
TRPS1-204ENST00000422939 APBA3O96018 575 aa10.67□□□□□ -0.7
TRPS1-204ENST00000422939 RAC1P63000 192 aa10.67□□□□□ -0.7
TRPS1-204ENST00000422939 ZNF211Q13398 564 aaPredicted RBP10.67□□□□□ -0.7
TRPS1-204ENST00000422939 POLIQ9UNA4 740 aa10.67□□□□□ -0.7
TRPS1-204ENST00000422939 ICMTO60725 284 aa10.66□□□□□ -0.7
TRPS1-204ENST00000422939 C8orf34Q49A92 452 aa10.66□□□□□ -0.7
TRPS1-204ENST00000422939 COL13A1Q5TAT6 717 aaPredicted RBP10.66□□□□□ -0.7
TRPS1-204ENST00000422939 FZD6O60353 706 aa10.65□□□□□ -0.7
TRPS1-204ENST00000422939 KIF4AO95239 1232 aa10.65□□□□□ -0.7
TRPS1-204ENST00000422939 ELNP15502 786 aa10.65□□□□□ -0.7
TRPS1-204ENST00000422939 USP5P45974 858 aa10.65□□□□□ -0.7
TRPS1-204ENST00000422939 GRIK4Q16099 956 aa10.65□□□□□ -0.7
TRPS1-204ENST00000422939 WFDC8Q8IUA0 241 aa10.65□□□□□ -0.7
TRPS1-204ENST00000422939 DTWD1Q8N5C7 304 aa10.65□□□□□ -0.7
TRPS1-204ENST00000422939 SPACA7Q96KW9 195 aa10.65□□□□□ -0.7
TRPS1-204ENST00000422939 NACC1Q96RE7 527 aa10.65□□□□□ -0.7
TRPS1-204ENST00000422939 CNTN3Q9P232 1028 aa10.65□□□□□ -0.7
TRPS1-204ENST00000422939 CYP2E1P05181 493 aaPredicted RBP10.64□□□□□ -0.71
TRPS1-204ENST00000422939 SERPINB4P48594 390 aa10.64□□□□□ -0.71
TRPS1-204ENST00000422939 TXNDC2Q86VQ3 553 aa10.64□□□□□ -0.71
TRPS1-204ENST00000422939 FMR1NBQ8N0W7 255 aaPredicted RBP10.64□□□□□ -0.71
TRPS1-204ENST00000422939 A6NHS1 94 aa10.63□□□□□ -0.71
TRPS1-204ENST00000422939 EHHADHQ08426 723 aa10.63□□□□□ -0.71
TRPS1-204ENST00000422939 BAG6P46379 1132 aa10.62□□□□□ -0.71
TRPS1-204ENST00000422939 GDF6Q6KF10 455 aaPredicted RBP10.62□□□□□ -0.71
TRPS1-204ENST00000422939 NCAPG2Q86XI2 1143 aa10.62□□□□□ -0.71
TRPS1-204ENST00000422939 CACTIN-AS1Q8N1I8 211 aa10.62□□□□□ -0.71
TRPS1-204ENST00000422939 C1orf127Q8N9H9 656 aa10.62□□□□□ -0.71
TRPS1-204ENST00000422939 C9orf172C9J069 976 aa10.61□□□□□ -0.71
TRPS1-204ENST00000422939 ECM1Q16610 540 aa10.61□□□□□ -0.71
TRPS1-204ENST00000422939 FBXO11Q86XK2 927 aa10.61□□□□□ -0.71
TRPS1-204ENST00000422939 CEP120Q8N960 986 aa10.61□□□□□ -0.71
TRPS1-204ENST00000422939 PMEPA1Q969W9 287 aa10.61□□□□□ -0.71
TRPS1-204ENST00000422939 CCDC87Q9NVE4 849 aa10.61□□□□□ -0.71
TRPS1-204ENST00000422939 H3BRB1 525 aa10.6□□□□□ -0.71
TRPS1-204ENST00000422939 SELPP16109 830 aa10.6□□□□□ -0.71
TRPS1-204ENST00000422939 CES1P23141 567 aa10.6□□□□□ -0.71
TRPS1-204ENST00000422939 GATA4P43694 442 aa10.6□□□□□ -0.71
TRPS1-204ENST00000422939 GLYCTKQ8IVS8 523 aa10.6□□□□□ -0.71
TRPS1-204ENST00000422939 IL22RA1Q8N6P7 574 aa10.6□□□□□ -0.71
TRPS1-204ENST00000422939 LENG1Q96BZ8 264 aaPredicted RBP10.6□□□□□ -0.71
TRPS1-204ENST00000422939 TUT1Q9H6E5 874 aaKnown RBP10.6□□□□□ -0.71
TRPS1-204ENST00000422939 SALL4Q9UJQ4 1053 aa10.6□□□□□ -0.71
TRPS1-204ENST00000422939 TRIM33Q9UPN9 1127 aa10.6□□□□□ -0.71
TRPS1-204ENST00000422939 SMNDC1O75940 238 aaKnown RBP eCLIP10.59□□□□□ -0.71
TRPS1-204ENST00000422939 ATP11AP98196 1134 aa10.59□□□□□ -0.71
TRPS1-204ENST00000422939 CEP135Q66GS9 1140 aa10.59□□□□□ -0.71
TRPS1-204ENST00000422939 GJD3Q8N144 294 aa10.59□□□□□ -0.71
TRPS1-204ENST00000422939 CCER1Q8TC90 406 aaPredicted RBP10.59□□□□□ -0.71
TRPS1-204ENST00000422939 RASSF4Q9H2L5 321 aa10.59□□□□□ -0.71
TRPS1-204ENST00000422939 KANSL3Q9P2N6 904 aa10.59□□□□□ -0.71
TRPS1-204ENST00000422939 TNFRSF21O75509 655 aa10.58□□□□□ -0.72
TRPS1-204ENST00000422939 PBX4Q9BYU1 374 aa10.58□□□□□ -0.72
TRPS1-204ENST00000422939 CHRDQ9H2X0 955 aa10.58□□□□□ -0.72
TRPS1-204ENST00000422939 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.58□□□□□ -0.72
TRPS1-204ENST00000422939 NRG1Q02297 640 aaPredicted RBP10.57□□□□□ -0.72
TRPS1-204ENST00000422939 SHISA2Q6UWI4 295 aa10.57□□□□□ -0.72
TRPS1-204ENST00000422939 MUC3BQ9H195 1237 aa10.57□□□□□ -0.72
TRPS1-204ENST00000422939 DEAF1O75398 565 aaPredicted RBP10.56□□□□□ -0.72
TRPS1-204ENST00000422939 ARHGAP4P98171 946 aa10.56□□□□□ -0.72
TRPS1-204ENST00000422939 ADGRE1Q14246 886 aa10.56□□□□□ -0.72
TRPS1-204ENST00000422939 BRPF3Q9ULD4 1205 aa10.56□□□□□ -0.72
TRPS1-204ENST00000422939 PHACTR2O75167 634 aa10.55□□□□□ -0.72
TRPS1-204ENST00000422939 BRD1O95696 1058 aa10.55□□□□□ -0.72
TRPS1-204ENST00000422939 SNX29Q8TEQ0 813 aa10.55□□□□□ -0.72
TRPS1-204ENST00000422939 SRA1Q9HD15 236 aaKnown RBP10.55□□□□□ -0.72
TRPS1-204ENST00000422939 PPME1Q9Y570 386 aa10.55□□□□□ -0.72
TRPS1-204ENST00000422939 IGF2-ASQ6U949 168 aa10.54□□□□□ -0.72
TRPS1-204ENST00000422939 MAP4K3Q8IVH8 894 aa10.54□□□□□ -0.72
TRPS1-204ENST00000422939 POP1Q99575 1024 aaKnown RBP10.54□□□□□ -0.72
TRPS1-204ENST00000422939 FOXD3Q9UJU5 478 aaPredicted RBP10.54□□□□□ -0.72
TRPS1-204ENST00000422939 DLL1O00548 723 aa10.53□□□□□ -0.72
TRPS1-204ENST00000422939 EREGO14944 169 aa10.53□□□□□ -0.72
TRPS1-204ENST00000422939 CDC27P30260 824 aa10.53□□□□□ -0.72
TRPS1-204ENST00000422939 MBTPS1Q14703 1052 aa10.53□□□□□ -0.72
TRPS1-204ENST00000422939 LACRTQ9GZZ8 138 aa10.53□□□□□ -0.72
TRPS1-204ENST00000422939 DZANK1Q9NVP4 752 aa10.53□□□□□ -0.72
TRPS1-204ENST00000422939 USP21Q9UK80 565 aa10.53□□□□□ -0.72
TRPS1-204ENST00000422939 GNEQ9Y223 722 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms