RNA–Protein interactions for RNA: ENST00000422877.1

SEC23B-205, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 3

Gene SEC23B, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-205ENST00000422877 EYA3Q99504 573 aa17.4■□□□□ 0.38
SEC23B-205ENST00000422877 MPHOSPH8Q99549 860 aa17.4■□□□□ 0.38
SEC23B-205ENST00000422877 BICC1Q9H694 974 aaKnown RBP17.4■□□□□ 0.38
SEC23B-205ENST00000422877 MINPP1Q9UNW1 487 aa17.39■□□□□ 0.37
SEC23B-205ENST00000422877 CHMP3Q9Y3E7 222 aa17.39■□□□□ 0.37
SEC23B-205ENST00000422877 GNAI3P08754 354 aa17.38■□□□□ 0.37
SEC23B-205ENST00000422877 AOC3Q16853 763 aa17.38■□□□□ 0.37
SEC23B-205ENST00000422877 NIM1KQ8IY84 436 aa17.38■□□□□ 0.37
SEC23B-205ENST00000422877 ANKRD44Q8N8A2 993 aa17.38■□□□□ 0.37
SEC23B-205ENST00000422877 TBC1D16Q8TBP0 767 aa17.38■□□□□ 0.37
SEC23B-205ENST00000422877 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
SEC23B-205ENST00000422877 POLLQ9UGP5 575 aa17.38■□□□□ 0.37
SEC23B-205ENST00000422877 GGA1Q9UJY5 639 aa17.38■□□□□ 0.37
SEC23B-205ENST00000422877 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
SEC23B-205ENST00000422877 MYH13Q9UKX3 1938 aa17.38■□□□□ 0.37
SEC23B-205ENST00000422877 MS4A1P11836 297 aa17.37■□□□□ 0.37
SEC23B-205ENST00000422877 ATP2B4P23634 1241 aa17.37■□□□□ 0.37
SEC23B-205ENST00000422877 WASHC4Q2M389 1173 aa17.37■□□□□ 0.37
SEC23B-205ENST00000422877 FTSJ3Q8IY81 847 aaKnown RBP17.37■□□□□ 0.37
SEC23B-205ENST00000422877 DZIP1LQ8IYY4 767 aaKnown RBP17.37■□□□□ 0.37
SEC23B-205ENST00000422877 ZNF526Q8TF50 670 aaPredicted RBP17.37■□□□□ 0.37
SEC23B-205ENST00000422877 ANKRD2Q9GZV1 360 aa17.37■□□□□ 0.37
SEC23B-205ENST00000422877 C6orf229H3BNL8 230 aa17.36■□□□□ 0.37
SEC23B-205ENST00000422877 TAF7LQ5H9L4 462 aa17.36■□□□□ 0.37
SEC23B-205ENST00000422877 CLUAP1Q96AJ1 413 aa17.36■□□□□ 0.37
SEC23B-205ENST00000422877 MEIS3Q99687 375 aa17.36■□□□□ 0.37
SEC23B-205ENST00000422877 TNNQ9UQP3 1299 aa17.36■□□□□ 0.37
SEC23B-205ENST00000422877 LEMD3Q9Y2U8 911 aa17.36■□□□□ 0.37
SEC23B-205ENST00000422877 MED23Q9ULK4 1368 aa17.36■□□□□ 0.37
SEC23B-205ENST00000422877 UFL1O94874 794 aa17.35■□□□□ 0.37
SEC23B-205ENST00000422877 EIF6P56537 245 aaKnown RBP17.35■□□□□ 0.37
SEC23B-205ENST00000422877 LDHAL6AQ6ZMR3 332 aa17.35■□□□□ 0.37
SEC23B-205ENST00000422877 GPC2Q8N158 579 aa17.35■□□□□ 0.37
SEC23B-205ENST00000422877 TMEM57Q8N5G2 664 aa17.35■□□□□ 0.37
SEC23B-205ENST00000422877 L3MBTL3Q96JM7 780 aaPredicted RBP17.35■□□□□ 0.37
SEC23B-205ENST00000422877 ZNRF3Q9ULT6 936 aa17.35■□□□□ 0.37
SEC23B-205ENST00000422877 ZC3H12CQ9C0D7 883 aaKnown RBP17.34■□□□□ 0.37
SEC23B-205ENST00000422877 ZNF541Q9H0D2 1346 aa17.34■□□□□ 0.37
SEC23B-205ENST00000422877 KIF3CO14782 793 aa17.33■□□□□ 0.36
SEC23B-205ENST00000422877 CHRNDQ07001 517 aa17.33■□□□□ 0.36
SEC23B-205ENST00000422877 NMRK2Q9NPI5 230 aa17.33■□□□□ 0.36
SEC23B-205ENST00000422877 CNNM1Q9NRU3 951 aa17.33■□□□□ 0.36
SEC23B-205ENST00000422877 LRRFIP2Q9Y608 721 aaKnown RBP17.33■□□□□ 0.36
SEC23B-205ENST00000422877 ADAMTSL1Q8N6G6 1762 aa17.33■□□□□ 0.36
SEC23B-205ENST00000422877 ARAP2Q8WZ64 1704 aa17.33■□□□□ 0.36
SEC23B-205ENST00000422877 DDNO94850 711 aaPredicted RBP17.32■□□□□ 0.36
SEC23B-205ENST00000422877 VEGFAP15692 232 aaPredicted RBP17.32■□□□□ 0.36
SEC23B-205ENST00000422877 MTX1Q13505 466 aa17.32■□□□□ 0.36
SEC23B-205ENST00000422877 ZNF594Q96JF6 807 aaPredicted RBP17.32■□□□□ 0.36
SEC23B-205ENST00000422877 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
SEC23B-205ENST00000422877 ZNF609O15014 1411 aa17.31■□□□□ 0.36
SEC23B-205ENST00000422877 ZNF804BA4D1E1 1349 aa17.31■□□□□ 0.36
SEC23B-205ENST00000422877 MROH5Q6ZUA9 1318 aa17.31■□□□□ 0.36
SEC23B-205ENST00000422877 IQCA1LA6NCM1 817 aa17.31■□□□□ 0.36
SEC23B-205ENST00000422877 GNAI2P04899 355 aa17.31■□□□□ 0.36
SEC23B-205ENST00000422877 RLBP1P12271 317 aa17.31■□□□□ 0.36
SEC23B-205ENST00000422877 RFX5P48382 616 aaPredicted RBP17.31■□□□□ 0.36
SEC23B-205ENST00000422877 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.31■□□□□ 0.36
SEC23B-205ENST00000422877 YTHDC1Q96MU7 727 aaKnown RBP17.31■□□□□ 0.36
SEC23B-205ENST00000422877 RIMBP2O15034 1052 aa17.3■□□□□ 0.36
SEC23B-205ENST00000422877 C15orf52Q6ZUT6 534 aaKnown RBP17.3■□□□□ 0.36
SEC23B-205ENST00000422877 ITPRIPQ8IWB1 547 aa17.3■□□□□ 0.36
SEC23B-205ENST00000422877 RRAGCQ9HB90 399 aa17.3■□□□□ 0.36
SEC23B-205ENST00000422877 RIPOR2Q9Y4F9 1068 aa17.3■□□□□ 0.36
SEC23B-205ENST00000422877 YDJCA8MPS7 323 aa17.29■□□□□ 0.36
SEC23B-205ENST00000422877 POTECB2RU33 542 aa17.29■□□□□ 0.36
SEC23B-205ENST00000422877 ECE2O60344 883 aa17.29■□□□□ 0.36
SEC23B-205ENST00000422877 PTPN12Q05209 780 aaKnown RBP17.29■□□□□ 0.36
SEC23B-205ENST00000422877 CXCL9Q07325 125 aa17.29■□□□□ 0.36
SEC23B-205ENST00000422877 TNIP1Q15025 636 aa17.29■□□□□ 0.36
SEC23B-205ENST00000422877 CIAPIN1Q6FI81 312 aa17.29■□□□□ 0.36
SEC23B-205ENST00000422877 PODNQ7Z5L7 613 aa17.29■□□□□ 0.36
SEC23B-205ENST00000422877 GPR101Q96P66 508 aaPredicted RBP17.29■□□□□ 0.36
SEC23B-205ENST00000422877 DBNDD1Q9H9R9 158 aa17.29■□□□□ 0.36
SEC23B-205ENST00000422877 IRS2Q9Y4H2 1338 aa17.28■□□□□ 0.36
SEC23B-205ENST00000422877 ZBTB7BO15156 539 aaPredicted RBP17.28■□□□□ 0.36
SEC23B-205ENST00000422877 TOMM70O94826 608 aa17.28■□□□□ 0.36
SEC23B-205ENST00000422877 KCNJ4P48050 445 aa17.28■□□□□ 0.36
SEC23B-205ENST00000422877 PDE3AQ14432 1141 aa17.28■□□□□ 0.36
SEC23B-205ENST00000422877 COPRSQ9NQ92 184 aa17.28■□□□□ 0.36
SEC23B-205ENST00000422877 ECM29Q5VYK3 1845 aa17.27■□□□□ 0.36
SEC23B-205ENST00000422877 G3V3G9 751 aa17.27■□□□□ 0.36
SEC23B-205ENST00000422877 EYA2O00167 538 aa17.27■□□□□ 0.36
SEC23B-205ENST00000422877 CIAO1O76071 339 aa17.27■□□□□ 0.36
SEC23B-205ENST00000422877 UBE4AQ14139 1066 aa17.27■□□□□ 0.36
SEC23B-205ENST00000422877 DCAF8Q5TAQ9 597 aa17.27■□□□□ 0.36
SEC23B-205ENST00000422877 C16orf71Q8IYS4 520 aaPredicted RBP17.27■□□□□ 0.36
SEC23B-205ENST00000422877 PUS3Q9BZE2 481 aaKnown RBP17.27■□□□□ 0.36
SEC23B-205ENST00000422877 COA1Q9GZY4 146 aa17.27■□□□□ 0.36
SEC23B-205ENST00000422877 POLR2AP24928 1970 aaKnown RBP17.27■□□□□ 0.36
SEC23B-205ENST00000422877 TAF5LO75529 589 aa17.26■□□□□ 0.35
SEC23B-205ENST00000422877 MVPQ14764 893 aaKnown RBP17.26■□□□□ 0.35
SEC23B-205ENST00000422877 DOK7Q18PE1 504 aa17.26■□□□□ 0.35
SEC23B-205ENST00000422877 LRRC24Q50LG9 513 aa17.26■□□□□ 0.35
SEC23B-205ENST00000422877 VGLL2Q8N8G2 317 aa17.26■□□□□ 0.35
SEC23B-205ENST00000422877 KLHDC4Q8TBB5 520 aa17.26■□□□□ 0.35
SEC23B-205ENST00000422877 RBM46Q8TBY0 533 aaKnown RBP17.26■□□□□ 0.35
SEC23B-205ENST00000422877 PANK1Q8TE04 598 aa17.26■□□□□ 0.35
SEC23B-205ENST00000422877 CHMP4BQ9H444 224 aaKnown RBP17.26■□□□□ 0.35
SEC23B-205ENST00000422877 HACL1Q9UJ83 578 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms