RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 CCDC30Q5VVM6 783 aa14.62□□□□□ -0.07
NDUFA3-208ENST00000422029 PI4KAP1Q8N8J0 262 aa14.62□□□□□ -0.07
NDUFA3-208ENST00000422029 METTL22Q9BUU2 404 aaPredicted RBP14.62□□□□□ -0.07
NDUFA3-208ENST00000422029 H7C1D1 291 aa14.61□□□□□ -0.07
NDUFA3-208ENST00000422029 PCCAP05165 728 aaPredicted RBP14.61□□□□□ -0.07
NDUFA3-208ENST00000422029 TMC4Q7Z404 712 aa14.61□□□□□ -0.07
NDUFA3-208ENST00000422029 IGKV5-2P06315 115 aa14.6□□□□□ -0.07
NDUFA3-208ENST00000422029 CTCFP49711 727 aaPredicted RBP14.6□□□□□ -0.07
NDUFA3-208ENST00000422029 WWC1Q8IX03 1113 aa14.6□□□□□ -0.07
NDUFA3-208ENST00000422029 CCDC191Q8NCU4 936 aa14.6□□□□□ -0.07
NDUFA3-208ENST00000422029 ZC3H12CQ9C0D7 883 aaKnown RBP14.6□□□□□ -0.07
NDUFA3-208ENST00000422029 MRS2Q9HD23 443 aa14.6□□□□□ -0.07
NDUFA3-208ENST00000422029 SCAF8Q9UPN6 1271 aaKnown RBP14.6□□□□□ -0.07
NDUFA3-208ENST00000422029 ASTN2O75129 1339 aaPredicted RBP14.6□□□□□ -0.07
NDUFA3-208ENST00000422029 RTL9Q8NET4 1388 aa14.6□□□□□ -0.07
NDUFA3-208ENST00000422029 ADM5C9JUS6 153 aa14.59□□□□□ -0.07
NDUFA3-208ENST00000422029 PDE8AO60658 829 aa14.59□□□□□ -0.07
NDUFA3-208ENST00000422029 DDX58O95786 925 aaKnown RBP14.59□□□□□ -0.07
NDUFA3-208ENST00000422029 SLC4A2P04920 1241 aa14.59□□□□□ -0.07
NDUFA3-208ENST00000422029 HSPA8P11142 646 aaKnown RBP14.59□□□□□ -0.07
NDUFA3-208ENST00000422029 TWISTNBQ3B726 338 aaPredicted RBP14.59□□□□□ -0.07
NDUFA3-208ENST00000422029 CCDC152Q4G0S7 254 aa14.59□□□□□ -0.07
NDUFA3-208ENST00000422029 KSR2Q6VAB6 950 aa14.59□□□□□ -0.07
NDUFA3-208ENST00000422029 EYA3Q99504 573 aa14.59□□□□□ -0.07
NDUFA3-208ENST00000422029 TLL2Q9Y6L7 1015 aa14.59□□□□□ -0.07
NDUFA3-208ENST00000422029 ZIC5Q96T25 663 aa14.58□□□□□ -0.08
NDUFA3-208ENST00000422029 STK31Q9BXU1 1019 aa14.58□□□□□ -0.08
NDUFA3-208ENST00000422029 GGA1Q9UJY5 639 aa14.58□□□□□ -0.08
NDUFA3-208ENST00000422029 LRRC37AA6NMS7 1700 aa14.58□□□□□ -0.08
NDUFA3-208ENST00000422029 PCNTO95613 3336 aa14.57□□□□□ -0.08
NDUFA3-208ENST00000422029 CDC37L1Q7L3B6 337 aa14.57□□□□□ -0.08
NDUFA3-208ENST00000422029 UBE3BQ7Z3V4 1068 aa14.57□□□□□ -0.08
NDUFA3-208ENST00000422029 SAPCD2Q86UD0 394 aa14.57□□□□□ -0.08
NDUFA3-208ENST00000422029 ANKRD18AQ8IVF6 992 aa14.57□□□□□ -0.08
NDUFA3-208ENST00000422029 MXD3Q9BW11 206 aa14.57□□□□□ -0.08
NDUFA3-208ENST00000422029 GREM2Q9H772 168 aa14.57□□□□□ -0.08
NDUFA3-208ENST00000422029 PGAP2Q9UHJ9 254 aa14.57□□□□□ -0.08
NDUFA3-208ENST00000422029 CTSWP56202 376 aa14.56□□□□□ -0.08
NDUFA3-208ENST00000422029 MAP2K1Q02750 393 aaPredicted RBP14.56□□□□□ -0.08
NDUFA3-208ENST00000422029 KRT26Q7Z3Y9 468 aa14.56□□□□□ -0.08
NDUFA3-208ENST00000422029 FBXW7Q969H0 707 aa14.56□□□□□ -0.08
NDUFA3-208ENST00000422029 TRPM7Q96QT4 1865 aa14.56□□□□□ -0.08
NDUFA3-208ENST00000422029 NEURL1BA8MQ27 555 aa14.55□□□□□ -0.08
NDUFA3-208ENST00000422029 ECE1P42892 770 aa14.55□□□□□ -0.08
NDUFA3-208ENST00000422029 NEXNQ0ZGT2 675 aa14.55□□□□□ -0.08
NDUFA3-208ENST00000422029 TTLL11Q8NHH1 800 aa14.55□□□□□ -0.08
NDUFA3-208ENST00000422029 PRDM10Q9NQV6 1147 aa14.55□□□□□ -0.08
NDUFA3-208ENST00000422029 SCN9AQ15858 1988 aa14.54□□□□□ -0.08
NDUFA3-208ENST00000422029 EXOSC9Q06265 439 aaKnown RBP14.54□□□□□ -0.08
NDUFA3-208ENST00000422029 KIF4BQ2VIQ3 1234 aa14.54□□□□□ -0.08
NDUFA3-208ENST00000422029 ZC3H15Q8WU90 426 aaKnown RBP14.54□□□□□ -0.08
NDUFA3-208ENST00000422029 DPF2Q92785 391 aa14.54□□□□□ -0.08
NDUFA3-208ENST00000422029 DCPSQ96C86 337 aaKnown RBP14.54□□□□□ -0.08
NDUFA3-208ENST00000422029 BEGAINQ9BUH8 593 aa14.54□□□□□ -0.08
NDUFA3-208ENST00000422029 PODXL2Q9NZ53 605 aa14.54□□□□□ -0.08
NDUFA3-208ENST00000422029 FANCIQ9NVI1 1328 aa14.54□□□□□ -0.08
NDUFA3-208ENST00000422029 POLR2AP24928 1970 aaKnown RBP14.54□□□□□ -0.08
NDUFA3-208ENST00000422029 SPEF2Q9C093 1822 aa14.53□□□□□ -0.08
NDUFA3-208ENST00000422029 CDHR2Q9BYE9 1310 aa14.53□□□□□ -0.08
NDUFA3-208ENST00000422029 F6X3S4 739 aa14.53□□□□□ -0.08
NDUFA3-208ENST00000422029 ANP32CO43423 234 aa14.53□□□□□ -0.08
NDUFA3-208ENST00000422029 VIL1P09327 827 aaKnown RBP14.53□□□□□ -0.08
NDUFA3-208ENST00000422029 KLRK1P26718 216 aa14.53□□□□□ -0.08
NDUFA3-208ENST00000422029 HUNKP57058 714 aa14.53□□□□□ -0.08
NDUFA3-208ENST00000422029 FKBP5Q13451 457 aaPredicted RBP14.53□□□□□ -0.08
NDUFA3-208ENST00000422029 PRAMEF18Q5VWM3 479 aa14.53□□□□□ -0.08
NDUFA3-208ENST00000422029 FAM9BQ8IZU0 186 aa14.53□□□□□ -0.08
NDUFA3-208ENST00000422029 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
NDUFA3-208ENST00000422029 GGA3Q9NZ52 723 aa14.53□□□□□ -0.08
NDUFA3-208ENST00000422029 MINPP1Q9UNW1 487 aa14.53□□□□□ -0.08
NDUFA3-208ENST00000422029 XDHP47989 1333 aa14.52□□□□□ -0.08
NDUFA3-208ENST00000422029 ZNF316A6NFI3 1004 aaPredicted RBP14.52□□□□□ -0.09
NDUFA3-208ENST00000422029 H7C1W4 665 aa14.52□□□□□ -0.09
NDUFA3-208ENST00000422029 SNAP23O00161 211 aa14.52□□□□□ -0.09
NDUFA3-208ENST00000422029 HSP90B1P14625 803 aaKnown RBP14.52□□□□□ -0.09
NDUFA3-208ENST00000422029 FLIIQ13045 1269 aa14.52□□□□□ -0.09
NDUFA3-208ENST00000422029 SCARF1Q14162 830 aa14.52□□□□□ -0.09
NDUFA3-208ENST00000422029 ANGEL2Q5VTE6 544 aaKnown RBP14.52□□□□□ -0.09
NDUFA3-208ENST00000422029 TXNRD3Q86VQ6 643 aa14.52□□□□□ -0.09
NDUFA3-208ENST00000422029 CDC5LQ99459 802 aaKnown RBP14.52□□□□□ -0.09
NDUFA3-208ENST00000422029 VAMP4O75379 141 aa14.51□□□□□ -0.09
NDUFA3-208ENST00000422029 ATP2B4P23634 1241 aa14.51□□□□□ -0.09
NDUFA3-208ENST00000422029 RPS12P25398 132 aaKnown RBP14.51□□□□□ -0.09
NDUFA3-208ENST00000422029 GCKRQ14397 625 aa14.51□□□□□ -0.09
NDUFA3-208ENST00000422029 CCDC27Q2M243 656 aa14.51□□□□□ -0.09
NDUFA3-208ENST00000422029 FAM161AQ3B820 660 aa14.51□□□□□ -0.09
NDUFA3-208ENST00000422029 RSBN1LQ6PCB5 846 aaPredicted RBP14.51□□□□□ -0.09
NDUFA3-208ENST00000422029 MOB2Q70IA6 237 aa14.51□□□□□ -0.09
NDUFA3-208ENST00000422029 ITGA6P23229 1130 aa14.5□□□□□ -0.09
NDUFA3-208ENST00000422029 HELBQ8NG08 1087 aaPredicted RBP14.5□□□□□ -0.09
NDUFA3-208ENST00000422029 DNAAF4Q8WXU2 420 aa14.5□□□□□ -0.09
NDUFA3-208ENST00000422029 CDCA5Q96FF9 252 aa14.5□□□□□ -0.09
NDUFA3-208ENST00000422029 GBA2Q9HCG7 927 aaPredicted RBP14.5□□□□□ -0.09
NDUFA3-208ENST00000422029 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.5□□□□□ -0.09
NDUFA3-208ENST00000422029 CHMP3Q9Y3E7 222 aa14.5□□□□□ -0.09
NDUFA3-208ENST00000422029 USP17L3A6NCW0 530 aa14.49□□□□□ -0.09
NDUFA3-208ENST00000422029 USP17L4A6NCW7 530 aa14.49□□□□□ -0.09
NDUFA3-208ENST00000422029 USP17L8P0C7I0 530 aa14.49□□□□□ -0.09
NDUFA3-208ENST00000422029 MAP2K2P36507 400 aa14.49□□□□□ -0.09
NDUFA3-208ENST00000422029 CCT4P50991 539 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms