RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 NEFMP07197 916 aa8.78□□□□□ -1
PMS1-208ENST00000421722 SCARF1Q14162 830 aa8.78□□□□□ -1
PMS1-208ENST00000421722 CNKSR2Q8WXI2 1034 aa8.78□□□□□ -1
PMS1-208ENST00000421722 DBNDD1Q9H9R9 158 aa8.78□□□□□ -1
PMS1-208ENST00000421722 PODXL2Q9NZ53 605 aa8.78□□□□□ -1
PMS1-208ENST00000421722 HCLS1P14317 486 aaPredicted RBP8.77□□□□□ -1.01
PMS1-208ENST00000421722 FXR1P51114 621 aaKnown RBP eCLIP8.77□□□□□ -1.01
PMS1-208ENST00000421722 PDIA6Q15084 440 aa8.77□□□□□ -1.01
PMS1-208ENST00000421722 RSBN1LQ6PCB5 846 aaPredicted RBP8.77□□□□□ -1.01
PMS1-208ENST00000421722 MIS18AQ9NYP9 233 aa8.77□□□□□ -1.01
PMS1-208ENST00000421722 TRMT112Q9UI30 125 aaKnown RBP8.77□□□□□ -1.01
PMS1-208ENST00000421722 C6orf229H3BNL8 230 aa8.77□□□□□ -1.01
PMS1-208ENST00000421722 INHBEP58166 350 aa8.77□□□□□ -1.01
PMS1-208ENST00000421722 GPSM2P81274 684 aa8.77□□□□□ -1.01
PMS1-208ENST00000421722 ANGEL2Q5VTE6 544 aaKnown RBP8.77□□□□□ -1.01
PMS1-208ENST00000421722 POLLQ9UGP5 575 aa8.77□□□□□ -1.01
PMS1-208ENST00000421722 RIMBP2O15034 1052 aa8.76□□□□□ -1.01
PMS1-208ENST00000421722 TBC1D16Q8TBP0 767 aa8.76□□□□□ -1.01
PMS1-208ENST00000421722 GMLQ99445 158 aa8.76□□□□□ -1.01
PMS1-208ENST00000421722 ZC3H12CQ9C0D7 883 aaKnown RBP8.76□□□□□ -1.01
PMS1-208ENST00000421722 NSFL1CQ9UNZ2 370 aaKnown RBP8.76□□□□□ -1.01
PMS1-208ENST00000421722 DLG5Q8TDM6 1919 aa8.76□□□□□ -1.01
PMS1-208ENST00000421722 UNCXA6NJT0 531 aa8.75□□□□□ -1.01
PMS1-208ENST00000421722 HSP90B1P14625 803 aaKnown RBP8.75□□□□□ -1.01
PMS1-208ENST00000421722 NF2P35240 595 aa8.75□□□□□ -1.01
PMS1-208ENST00000421722 NFE2L2Q16236 605 aa8.75□□□□□ -1.01
PMS1-208ENST00000421722 POTEHQ6S545 545 aa8.75□□□□□ -1.01
PMS1-208ENST00000421722 ARMC5Q96C12 935 aa8.75□□□□□ -1.01
PMS1-208ENST00000421722 PNNQ9H307 717 aaKnown RBP8.75□□□□□ -1.01
PMS1-208ENST00000421722 LAMB1P07942 1786 aa8.75□□□□□ -1.01
PMS1-208ENST00000421722 MANSC4A6NHS7 340 aaPredicted RBP8.75□□□□□ -1.01
PMS1-208ENST00000421722 UBE2Q2LH0YL09 131 aa8.75□□□□□ -1.01
PMS1-208ENST00000421722 TRIM26Q12899 539 aaPredicted RBP8.75□□□□□ -1.01
PMS1-208ENST00000421722 DOK7Q18PE1 504 aa8.75□□□□□ -1.01
PMS1-208ENST00000421722 ARMC9Q7Z3E5 817 aa8.75□□□□□ -1.01
PMS1-208ENST00000421722 ERO1AQ96HE7 468 aa8.75□□□□□ -1.01
PMS1-208ENST00000421722 COL1A1P02452 1464 aaPredicted RBP8.74□□□□□ -1.01
PMS1-208ENST00000421722 G3V3G9 751 aa8.74□□□□□ -1.01
PMS1-208ENST00000421722 USP17L8P0C7I0 530 aa8.74□□□□□ -1.01
PMS1-208ENST00000421722 DCAF8Q5TAQ9 597 aa8.74□□□□□ -1.01
PMS1-208ENST00000421722 MYOZ2Q9NPC6 264 aa8.74□□□□□ -1.01
PMS1-208ENST00000421722 ASTN2O75129 1339 aaPredicted RBP8.74□□□□□ -1.01
PMS1-208ENST00000421722 PPP2R1AP30153 589 aa8.74□□□□□ -1.01
PMS1-208ENST00000421722 RPS8P62241 208 aaKnown RBP8.74□□□□□ -1.01
PMS1-208ENST00000421722 CELF1Q92879 486 aaKnown RBP8.74□□□□□ -1.01
PMS1-208ENST00000421722 ISCA1Q9BUE6 129 aa8.74□□□□□ -1.01
PMS1-208ENST00000421722 KCNQ5Q9NR82 932 aa8.74□□□□□ -1.01
PMS1-208ENST00000421722 LDLRAD1Q5T700 205 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 SPRYD7Q5W111 196 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 COPS6Q7L5N1 327 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 OTOP1Q7RTM1 612 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 XAGE3Q8WTP9 111 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 THUMPD2Q9BTF0 503 aaKnown RBP8.73□□□□□ -1.01
PMS1-208ENST00000421722 GGA1Q9UJY5 639 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 PTPN22Q9Y2R2 807 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 SCN9AQ15858 1988 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 POTEFA5A3E0 1075 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 USP17L3A6NCW0 530 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 USP17L4A6NCW7 530 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 TRIM28Q13263 835 aaKnown RBP8.73□□□□□ -1.01
PMS1-208ENST00000421722 USP17L1Q7RTZ2 530 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 PODNQ7Z5L7 613 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 TSPYL4Q9UJ04 414 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 TRIM17Q9Y577 477 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 MYO3BQ8WXR4 1341 aa8.73□□□□□ -1.01
PMS1-208ENST00000421722 TAF1P21675 1872 aa8.72□□□□□ -1.01
PMS1-208ENST00000421722 ATP2B4P23634 1241 aa8.72□□□□□ -1.01
PMS1-208ENST00000421722 TTLL12Q14166 644 aaPredicted RBP8.72□□□□□ -1.01
PMS1-208ENST00000421722 ARHGEF6Q15052 776 aa8.72□□□□□ -1.01
PMS1-208ENST00000421722 APOBEC3FQ8IUX4 373 aaKnown RBP8.72□□□□□ -1.01
PMS1-208ENST00000421722 PLBD2Q8NHP8 589 aa8.72□□□□□ -1.01
PMS1-208ENST00000421722 PLEKHF1Q96S99 279 aa8.72□□□□□ -1.01
PMS1-208ENST00000421722 UFL1O94874 794 aa8.71□□□□□ -1.01
PMS1-208ENST00000421722 ZBTB48P10074 688 aaPredicted RBP8.71□□□□□ -1.01
PMS1-208ENST00000421722 MAP3K11Q16584 847 aa8.71□□□□□ -1.01
PMS1-208ENST00000421722 PROSER3Q2NL68 480 aa8.71□□□□□ -1.01
PMS1-208ENST00000421722 MOB2Q70IA6 237 aa8.71□□□□□ -1.01
PMS1-208ENST00000421722 IFNL1Q8IU54 200 aa8.71□□□□□ -1.01
PMS1-208ENST00000421722 EIF2S2P20042 333 aaKnown RBP8.71□□□□□ -1.02
PMS1-208ENST00000421722 PTPN12Q05209 780 aaKnown RBP8.71□□□□□ -1.02
PMS1-208ENST00000421722 OTUD7BQ6GQQ9 843 aa8.71□□□□□ -1.02
PMS1-208ENST00000421722 TMEM106CQ9BVX2 250 aa8.71□□□□□ -1.02
PMS1-208ENST00000421722 R3HDMLQ9H3Y0 253 aa8.71□□□□□ -1.02
PMS1-208ENST00000421722 CACNB1Q02641 598 aaPredicted RBP8.7□□□□□ -1.02
PMS1-208ENST00000421722 XDHP47989 1333 aa8.7□□□□□ -1.02
PMS1-208ENST00000421722 IRS4O14654 1257 aaPredicted RBP8.7□□□□□ -1.02
PMS1-208ENST00000421722 HOXB7P09629 217 aa8.7□□□□□ -1.02
PMS1-208ENST00000421722 COLQQ9Y215 455 aaPredicted RBP8.7□□□□□ -1.02
PMS1-208ENST00000421722 PPP2R3BQ9Y5P8 575 aa8.7□□□□□ -1.02
PMS1-208ENST00000421722 TESPA1A2RU30 521 aaPredicted RBP8.69□□□□□ -1.02
PMS1-208ENST00000421722 LMOD3Q0VAK6 560 aa8.69□□□□□ -1.02
PMS1-208ENST00000421722 AIMP1Q12904 312 aaKnown RBP8.69□□□□□ -1.02
PMS1-208ENST00000421722 MAPK8IP2Q13387 824 aaPredicted RBP8.69□□□□□ -1.02
PMS1-208ENST00000421722 SLC10A4Q96EP9 437 aa8.69□□□□□ -1.02
PMS1-208ENST00000421722 WNK4Q96J92 1243 aa8.69□□□□□ -1.02
PMS1-208ENST00000421722 EFCC1Q9HA90 598 aa8.69□□□□□ -1.02
PMS1-208ENST00000421722 ANKIB1Q9P2G1 1089 aa8.69□□□□□ -1.02
PMS1-208ENST00000421722 MED23Q9ULK4 1368 aa8.69□□□□□ -1.02
PMS1-208ENST00000421722 ZNF646O15015 1829 aaPredicted RBP8.69□□□□□ -1.02
PMS1-208ENST00000421722 MAPK8IP3Q9UPT6 1336 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms