RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 NEUROD2Q15784 382 aa9.92□□□□□ -0.82
AC012560.1-202ENST00000421324 GPR162Q16538 588 aa9.92□□□□□ -0.82
AC012560.1-202ENST00000421324 CCDC146Q8IYE0 955 aa9.92□□□□□ -0.82
AC012560.1-202ENST00000421324 USB1Q9BQ65 265 aaKnown RBP9.92□□□□□ -0.82
AC012560.1-202ENST00000421324 MIS18AQ9NYP9 233 aa9.92□□□□□ -0.82
AC012560.1-202ENST00000421324 CD2APQ9Y5K6 639 aa9.92□□□□□ -0.82
AC012560.1-202ENST00000421324 TUBGCP6Q96RT7 1819 aa9.91□□□□□ -0.82
AC012560.1-202ENST00000421324 SOS1Q07889 1333 aaPredicted RBP9.91□□□□□ -0.82
AC012560.1-202ENST00000421324 MOXD2PA6NHM9 499 aa9.91□□□□□ -0.82
AC012560.1-202ENST00000421324 MMP16P51512 607 aa9.91□□□□□ -0.82
AC012560.1-202ENST00000421324 SPRYD7Q5W111 196 aa9.91□□□□□ -0.82
AC012560.1-202ENST00000421324 THUMPD2Q9BTF0 503 aaKnown RBP9.91□□□□□ -0.82
AC012560.1-202ENST00000421324 SRP68Q9UHB9 627 aaKnown RBP9.91□□□□□ -0.82
AC012560.1-202ENST00000421324 ZBTB1Q9Y2K1 713 aa9.91□□□□□ -0.82
AC012560.1-202ENST00000421324 ZNF330Q9Y3S2 320 aaPredicted RBP9.91□□□□□ -0.82
AC012560.1-202ENST00000421324 PARP3Q9Y6F1 533 aa9.91□□□□□ -0.82
AC012560.1-202ENST00000421324 UBR3Q6ZT12 1888 aa9.91□□□□□ -0.82
AC012560.1-202ENST00000421324 SRCAPQ6ZRS2 3230 aa9.91□□□□□ -0.82
AC012560.1-202ENST00000421324 KCPQ6ZWJ8 1503 aa9.91□□□□□ -0.82
AC012560.1-202ENST00000421324 USP42Q9H9J4 1324 aaKnown RBP9.9□□□□□ -0.82
AC012560.1-202ENST00000421324 A1BGP04217 495 aa9.9□□□□□ -0.82
AC012560.1-202ENST00000421324 FDX1P10109 184 aa9.9□□□□□ -0.82
AC012560.1-202ENST00000421324 NDUFV2P19404 249 aa9.9□□□□□ -0.82
AC012560.1-202ENST00000421324 USPL1Q5W0Q7 1092 aa9.9□□□□□ -0.82
AC012560.1-202ENST00000421324 SYMPKQ92797 1274 aaKnown RBP9.9□□□□□ -0.82
AC012560.1-202ENST00000421324 NARFQ9UHQ1 456 aa9.9□□□□□ -0.82
AC012560.1-202ENST00000421324 RRP7AQ9Y3A4 280 aaKnown RBP9.9□□□□□ -0.82
AC012560.1-202ENST00000421324 USP16Q9Y5T5 823 aa9.9□□□□□ -0.82
AC012560.1-202ENST00000421324 DXOO77932 396 aaKnown RBP9.89□□□□□ -0.83
AC012560.1-202ENST00000421324 IL6STP40189 918 aaPredicted RBP9.89□□□□□ -0.83
AC012560.1-202ENST00000421324 EIF5P55010 431 aaKnown RBP9.89□□□□□ -0.83
AC012560.1-202ENST00000421324 NLGN2Q8NFZ4 835 aa9.89□□□□□ -0.83
AC012560.1-202ENST00000421324 TBC1D2Q9BYX2 928 aa9.89□□□□□ -0.83
AC012560.1-202ENST00000421324 BABAM1Q9NWV8 329 aa9.89□□□□□ -0.83
AC012560.1-202ENST00000421324 FCF1Q9Y324 198 aaKnown RBP9.89□□□□□ -0.83
AC012560.1-202ENST00000421324 COL15A1P39059 1388 aa9.88□□□□□ -0.83
AC012560.1-202ENST00000421324 COL5A3P25940 1745 aaPredicted RBP9.88□□□□□ -0.83
AC012560.1-202ENST00000421324 TRIM67Q6ZTA4 783 aa9.88□□□□□ -0.83
AC012560.1-202ENST00000421324 TSPYL4Q9UJ04 414 aa9.88□□□□□ -0.83
AC012560.1-202ENST00000421324 TBC1D2BQ9UPU7 963 aa9.88□□□□□ -0.83
AC012560.1-202ENST00000421324 VIRMAQ69YN4 1812 aaKnown RBP9.88□□□□□ -0.83
AC012560.1-202ENST00000421324 MYH14Q7Z406 1995 aaKnown RBP9.88□□□□□ -0.83
AC012560.1-202ENST00000421324 TJP1Q07157 1748 aa9.87□□□□□ -0.83
AC012560.1-202ENST00000421324 COL24A1Q17RW2 1714 aa9.87□□□□□ -0.83
AC012560.1-202ENST00000421324 PRAMEF22A3QJZ6 481 aa9.87□□□□□ -0.83
AC012560.1-202ENST00000421324 APAF1O14727 1248 aa9.87□□□□□ -0.83
AC012560.1-202ENST00000421324 GRIN3BO60391 1043 aa9.87□□□□□ -0.83
AC012560.1-202ENST00000421324 GIGYF1O75420 1035 aaPredicted RBP9.87□□□□□ -0.83
AC012560.1-202ENST00000421324 TM4SF1P30408 202 aa9.87□□□□□ -0.83
AC012560.1-202ENST00000421324 GJA5P36382 358 aa9.87□□□□□ -0.83
AC012560.1-202ENST00000421324 EIF4A1P60842 406 aaKnown RBP9.87□□□□□ -0.83
AC012560.1-202ENST00000421324 TGFB2P61812 414 aa9.87□□□□□ -0.83
AC012560.1-202ENST00000421324 ZNF598Q86UK7 904 aaKnown RBP9.87□□□□□ -0.83
AC012560.1-202ENST00000421324 MRS2Q9HD23 443 aa9.87□□□□□ -0.83
AC012560.1-202ENST00000421324 LAS1LQ9Y4W2 734 aaKnown RBP9.87□□□□□ -0.83
AC012560.1-202ENST00000421324 CICQ96RK0 1608 aaPredicted RBP9.86□□□□□ -0.83
AC012560.1-202ENST00000421324 GFRA3O60609 400 aa9.86□□□□□ -0.83
AC012560.1-202ENST00000421324 RPIAP49247 311 aa9.86□□□□□ -0.83
AC012560.1-202ENST00000421324 DIXDC1Q155Q3 683 aa9.86□□□□□ -0.83
AC012560.1-202ENST00000421324 CCDC184Q52MB2 194 aa9.86□□□□□ -0.83
AC012560.1-202ENST00000421324 RETREG3Q86VR2 466 aa9.86□□□□□ -0.83
AC012560.1-202ENST00000421324 DZIP3Q86Y13 1208 aaKnown RBP9.86□□□□□ -0.83
AC012560.1-202ENST00000421324 SIPA1L3O60292 1781 aaPredicted RBP9.86□□□□□ -0.83
AC012560.1-202ENST00000421324 UBR2Q8IWV8 1755 aa9.86□□□□□ -0.83
AC012560.1-202ENST00000421324 CHL1O00533 1208 aa9.85□□□□□ -0.83
AC012560.1-202ENST00000421324 SPTLC1O15269 473 aa9.85□□□□□ -0.83
AC012560.1-202ENST00000421324 YY1P25490 414 aa9.85□□□□□ -0.83
AC012560.1-202ENST00000421324 PIP4K2AP48426 406 aaPredicted RBP9.85□□□□□ -0.83
AC012560.1-202ENST00000421324 CALD1Q05682 793 aaKnown RBP9.85□□□□□ -0.83
AC012560.1-202ENST00000421324 NFIXQ14938 502 aa9.85□□□□□ -0.83
AC012560.1-202ENST00000421324 RSBN1LQ6PCB5 846 aaPredicted RBP9.85□□□□□ -0.83
AC012560.1-202ENST00000421324 BICDL1Q6ZP65 573 aa9.85□□□□□ -0.83
AC012560.1-202ENST00000421324 A0A0G2JLW4 131 aa9.84□□□□□ -0.83
AC012560.1-202ENST00000421324 POLRMTO00411 1230 aaKnown RBP9.84□□□□□ -0.83
AC012560.1-202ENST00000421324 SERPINB2P05120 415 aa9.84□□□□□ -0.83
AC012560.1-202ENST00000421324 DDR1Q08345 913 aa9.84□□□□□ -0.83
AC012560.1-202ENST00000421324 LAPTM4AQ15012 233 aa9.84□□□□□ -0.83
AC012560.1-202ENST00000421324 NBPF10Q6P3W6 841 aaKnown RBP9.84□□□□□ -0.83
AC012560.1-202ENST00000421324 CLEC4GQ6UXB4 293 aa9.84□□□□□ -0.83
AC012560.1-202ENST00000421324 NGEFQ8N5V2 710 aa9.84□□□□□ -0.83
AC012560.1-202ENST00000421324 NBPF15Q8N660 670 aa9.84□□□□□ -0.83
AC012560.1-202ENST00000421324 SETDB2Q96T68 719 aa9.84□□□□□ -0.83
AC012560.1-202ENST00000421324 ZNF652Q9Y2D9 606 aa9.84□□□□□ -0.83
AC012560.1-202ENST00000421324 DLG5Q8TDM6 1919 aa9.84□□□□□ -0.83
AC012560.1-202ENST00000421324 NPHP1O15259 732 aa9.83□□□□□ -0.84
AC012560.1-202ENST00000421324 CAMTA2O94983 1202 aa9.83□□□□□ -0.84
AC012560.1-202ENST00000421324 YBX3P16989 372 aaKnown RBP eCLIP9.83□□□□□ -0.84
AC012560.1-202ENST00000421324 EIF2S2P20042 333 aaKnown RBP9.83□□□□□ -0.84
AC012560.1-202ENST00000421324 TBC1D9BQ66K14 1250 aa9.83□□□□□ -0.84
AC012560.1-202ENST00000421324 PCDHB15Q9Y5E8 787 aa9.83□□□□□ -0.84
AC012560.1-202ENST00000421324 NRG2O14511 850 aaPredicted RBP9.82□□□□□ -0.84
AC012560.1-202ENST00000421324 MYL6BP14649 208 aa9.82□□□□□ -0.84
AC012560.1-202ENST00000421324 DPEP1P16444 411 aa9.82□□□□□ -0.84
AC012560.1-202ENST00000421324 JUNDP17535 347 aa9.82□□□□□ -0.84
AC012560.1-202ENST00000421324 GNAI1P63096 354 aa9.82□□□□□ -0.84
AC012560.1-202ENST00000421324 ZNF697Q5TEC3 545 aa9.82□□□□□ -0.84
AC012560.1-202ENST00000421324 PIM2Q9P1W9 311 aa9.82□□□□□ -0.84
AC012560.1-202ENST00000421324 WWC3Q9ULE0 1092 aa9.82□□□□□ -0.84
AC012560.1-202ENST00000421324 PDZRN3Q9UPQ7 1066 aa9.82□□□□□ -0.84
AC012560.1-202ENST00000421324 ERBB4Q15303 1308 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms