RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PHKG2P15735 406 aa12.48□□□□□ -0.41
PTCH1-206ENST00000421141 CCDC82Q8N4S0 544 aa12.48□□□□□ -0.41
PTCH1-206ENST00000421141 SBNO2Q9Y2G9 1366 aa12.48□□□□□ -0.41
PTCH1-206ENST00000421141 MCMDC2Q4G0Z9 681 aa12.48□□□□□ -0.41
PTCH1-206ENST00000421141 WDR66Q8TBY9 1149 aa12.48□□□□□ -0.41
PTCH1-206ENST00000421141 DEKP35659 375 aaKnown RBP12.48□□□□□ -0.41
PTCH1-206ENST00000421141 GNAQP50148 359 aa12.48□□□□□ -0.41
PTCH1-206ENST00000421141 TXLNBQ8N3L3 684 aa12.48□□□□□ -0.41
PTCH1-206ENST00000421141 METAP2P50579 478 aaKnown RBP eCLIP12.47□□□□□ -0.41
PTCH1-206ENST00000421141 ATP8B2P98198 1209 aa12.47□□□□□ -0.41
PTCH1-206ENST00000421141 TNMDQ9H2S6 317 aa12.47□□□□□ -0.41
PTCH1-206ENST00000421141 LGR6Q9HBX8 967 aa12.47□□□□□ -0.41
PTCH1-206ENST00000421141 NLGN1Q8N2Q7 840 aa12.47□□□□□ -0.41
PTCH1-206ENST00000421141 MCM9Q9NXL9 1143 aa12.47□□□□□ -0.41
PTCH1-206ENST00000421141 BCS1LQ9Y276 419 aa12.47□□□□□ -0.41
PTCH1-206ENST00000421141 HAND2P61296 217 aa12.47□□□□□ -0.41
PTCH1-206ENST00000421141 HIBADHP31937 336 aaKnown RBP12.46□□□□□ -0.41
PTCH1-206ENST00000421141 TMOD4Q9NZQ9 345 aa12.46□□□□□ -0.41
PTCH1-206ENST00000421141 A1BGP04217 495 aa12.46□□□□□ -0.41
PTCH1-206ENST00000421141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.41
PTCH1-206ENST00000421141 CEP170BQ9Y4F5 1589 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-206ENST00000421141 WDR17Q8IZU2 1322 aa12.46□□□□□ -0.41
PTCH1-206ENST00000421141 HELBQ8NG08 1087 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-206ENST00000421141 ZNF408Q9H9D4 720 aa12.46□□□□□ -0.41
PTCH1-206ENST00000421141 LOC102724428A0A0B4J2F2 783 aa12.46□□□□□ -0.41
PTCH1-206ENST00000421141 SIK1P57059 783 aa12.46□□□□□ -0.41
PTCH1-206ENST00000421141 MROH5Q6ZUA9 1318 aa12.46□□□□□ -0.41
PTCH1-206ENST00000421141 MPNDQ8N594 471 aa12.46□□□□□ -0.42
PTCH1-206ENST00000421141 BLMP54132 1417 aaPredicted RBP12.46□□□□□ -0.42
PTCH1-206ENST00000421141 PPIP5K2O43314 1243 aa12.46□□□□□ -0.42
PTCH1-206ENST00000421141 EAPPQ56P03 285 aaPredicted RBP12.46□□□□□ -0.42
PTCH1-206ENST00000421141 ARHGAP27Q6ZUM4 889 aa12.46□□□□□ -0.42
PTCH1-206ENST00000421141 DNAJC10Q8IXB1 793 aa12.46□□□□□ -0.42
PTCH1-206ENST00000421141 MYO6Q9UM54 1294 aa12.46□□□□□ -0.42
PTCH1-206ENST00000421141 TTC41PQ6P2S7 1318 aa12.46□□□□□ -0.42
PTCH1-206ENST00000421141 KIF24Q5T7B8 1368 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 MICU3Q86XE3 530 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 C20orf194Q5TEA3 1177 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 CCDC144CPQ8IYA2 1237 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 SEPT12Q8IYM1 358 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 VAMP4O75379 141 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 BRINP3Q76B58 766 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 DRC1Q96MC2 740 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 NEK1Q96PY6 1258 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 BIN2Q9UBW5 565 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-206ENST00000421141 POTEJP0CG39 1038 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 CCDC192P0DO97 292 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 ADGRL3Q9HAR2 1447 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 PRPF40AO75400 957 aaKnown RBP12.45□□□□□ -0.42
PTCH1-206ENST00000421141 CERKQ8TCT0 537 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 ZMYM4Q5VZL5 1548 aa12.45□□□□□ -0.42
PTCH1-206ENST00000421141 TCIRG1Q13488 830 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 CCDC83Q8IWF9 413 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 ANKRD44Q8N8A2 993 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 ZNF592Q92610 1267 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 CNKSR1Q969H4 720 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 CALML4Q96GE6 196 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 RTN4Q9NQC3 1192 aaKnown RBP12.44□□□□□ -0.42
PTCH1-206ENST00000421141 TCP11L1Q9NUJ3 509 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 IARSP41252 1262 aaKnown RBP12.44□□□□□ -0.42
PTCH1-206ENST00000421141 ARHGEF10LQ9HCE6 1279 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 SERPINC1P01008 464 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 TTC6Q86TZ1 520 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 C2CD5Q86YS7 1000 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 IL27Q8NEV9 243 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 SPATA31E1Q6ZUB1 1445 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 HDAC1Q13547 482 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-206ENST00000421141 DHX8Q14562 1220 aaKnown RBP12.44□□□□□ -0.42
PTCH1-206ENST00000421141 TSG101Q99816 390 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 JAG2Q9Y219 1238 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 TFCP2Q12800 502 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 TBC1D22AQ8WUA7 517 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 FGFR1OPO95684 399 aaKnown RBP12.44□□□□□ -0.42
PTCH1-206ENST00000421141 CKAP2LQ8IYA6 745 aa12.44□□□□□ -0.42
PTCH1-206ENST00000421141 CCT2P78371 535 aaKnown RBP12.43□□□□□ -0.42
PTCH1-206ENST00000421141 TTC22Q5TAA0 569 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 TRIM5Q9C035 493 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 KIF20BQ96Q89 1820 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 CAVIN1Q6NZI2 390 aaKnown RBP12.43□□□□□ -0.42
PTCH1-206ENST00000421141 LIMCH1Q9UPQ0 1083 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 CCDC148Q8NFR7 591 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 DEF6Q9H4E7 631 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 SETBP1Q9Y6X0 1596 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 MYO5BQ9ULV0 1848 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 STXBP4Q6ZWJ1 553 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 TEX11Q8IYF3 940 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 NUCB1Q02818 461 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 AFF2P51816 1311 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 SPDYE3A6NKU9 549 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 BMP2KLQ5H9B9 411 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 RTL9Q8NET4 1388 aa12.43□□□□□ -0.42
PTCH1-206ENST00000421141 KIF20AO95235 890 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 RAB3GAP1Q15042 981 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 PYM1Q9BRP8 204 aaKnown RBP12.42□□□□□ -0.42
PTCH1-206ENST00000421141 PA2G4Q9UQ80 394 aaKnown RBP12.42□□□□□ -0.42
PTCH1-206ENST00000421141 AMPD3Q01432 767 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 GPS2Q13227 327 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 TNFAIP1Q13829 316 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 PPFIBP1Q86W92 1011 aa12.42□□□□□ -0.42
PTCH1-206ENST00000421141 AGLP35573 1532 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms