RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 SMIM23A6NLE4 172 aa14.05□□□□□ -0.16
CLCN4-203ENST00000421085 C17orf53Q8N3J3 647 aaPredicted RBP14.05□□□□□ -0.16
CLCN4-203ENST00000421085 ANKRD44Q8N8A2 993 aa14.05□□□□□ -0.16
CLCN4-203ENST00000421085 PI4KAP2A4QPH2 592 aa14.05□□□□□ -0.16
CLCN4-203ENST00000421085 SYCP3Q8IZU3 236 aa14.05□□□□□ -0.16
CLCN4-203ENST00000421085 PI4KAP1Q8N8J0 262 aa14.05□□□□□ -0.16
CLCN4-203ENST00000421085 DHX58Q96C10 678 aa14.05□□□□□ -0.16
CLCN4-203ENST00000421085 LRRC27Q9C0I9 530 aa14.05□□□□□ -0.16
CLCN4-203ENST00000421085 ZBTB43O43298 467 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 PPP4R3AQ6IN85 833 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 TBC1D5Q92609 795 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 VAV2P52735 878 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 TTC14Q96N46 770 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 IQCGQ9H095 443 aaKnown RBP14.04□□□□□ -0.16
CLCN4-203ENST00000421085 CCDC172P0C7W6 258 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 ZC3H6P61129 1189 aaKnown RBP14.04□□□□□ -0.16
CLCN4-203ENST00000421085 CCDC42Q96M95 316 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 PLVAPQ9BX97 442 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 TNNQ9UQP3 1299 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 TUBBP07437 444 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 ARFGAP2Q8N6H7 521 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 AFAP1L1Q8TED9 768 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 FERMT2Q96AC1 680 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 CCDC77Q9BR77 488 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 PSMA7O14818 248 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 STX17P56962 302 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 UBXN1Q04323 297 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 ZBTB16Q05516 673 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 KAT14Q9H8E8 782 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 PIK3R4Q99570 1358 aa14.04□□□□□ -0.16
CLCN4-203ENST00000421085 NPHP3Q7Z494 1330 aa14.03□□□□□ -0.16
CLCN4-203ENST00000421085 FERP16591 822 aa14.03□□□□□ -0.16
CLCN4-203ENST00000421085 GABPB1Q06547 395 aaPredicted RBP14.03□□□□□ -0.16
CLCN4-203ENST00000421085 ARID5AQ03989 594 aa14.03□□□□□ -0.16
CLCN4-203ENST00000421085 INTS4Q96HW7 963 aaKnown RBP14.03□□□□□ -0.16
CLCN4-203ENST00000421085 BAG1Q99933 345 aaPredicted RBP14.03□□□□□ -0.16
CLCN4-203ENST00000421085 SAMD15Q9P1V8 674 aa14.03□□□□□ -0.16
CLCN4-203ENST00000421085 VGLL3A8MV65 326 aa14.03□□□□□ -0.16
CLCN4-203ENST00000421085 BMP15O95972 392 aa14.03□□□□□ -0.16
CLCN4-203ENST00000421085 WTAPQ15007 396 aa14.03□□□□□ -0.16
CLCN4-203ENST00000421085 ELF2Q15723 593 aa14.03□□□□□ -0.16
CLCN4-203ENST00000421085 STXBP4Q6ZWJ1 553 aa14.03□□□□□ -0.16
CLCN4-203ENST00000421085 CCDC141Q6ZP82 1450 aa14.03□□□□□ -0.16
CLCN4-203ENST00000421085 TSPY2A6NKD2 308 aa14.03□□□□□ -0.16
CLCN4-203ENST00000421085 ACTN2P35609 894 aa14.03□□□□□ -0.16
CLCN4-203ENST00000421085 AMOTQ4VCS5 1084 aa14.02□□□□□ -0.16
CLCN4-203ENST00000421085 TLDC2A0PJX2 215 aa14.02□□□□□ -0.16
CLCN4-203ENST00000421085 CFAP58Q5T655 872 aa14.02□□□□□ -0.16
CLCN4-203ENST00000421085 TRMT1LQ7Z2T5 733 aaKnown RBP14.02□□□□□ -0.16
CLCN4-203ENST00000421085 TRMT112Q9UI30 125 aaKnown RBP14.02□□□□□ -0.16
CLCN4-203ENST00000421085 NBPF7P0C2Y1 421 aaPredicted RBP14.02□□□□□ -0.17
CLCN4-203ENST00000421085 GRIPAP1Q4V328 841 aa14.02□□□□□ -0.17
CLCN4-203ENST00000421085 PUS7Q96PZ0 661 aaKnown RBP14.02□□□□□ -0.17
CLCN4-203ENST00000421085 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.02□□□□□ -0.17
CLCN4-203ENST00000421085 KCNH5Q8NCM2 988 aa14.02□□□□□ -0.17
CLCN4-203ENST00000421085 SMC6Q96SB8 1091 aa14.02□□□□□ -0.17
CLCN4-203ENST00000421085 DNAI2Q9GZS0 605 aa14.02□□□□□ -0.17
CLCN4-203ENST00000421085 PRDM11Q9NQV5 511 aa14.02□□□□□ -0.17
CLCN4-203ENST00000421085 TSNARE1Q96NA8 513 aa14.01□□□□□ -0.17
CLCN4-203ENST00000421085 MCMDC2Q4G0Z9 681 aa14.01□□□□□ -0.17
CLCN4-203ENST00000421085 MRPL50Q8N5N7 158 aaKnown RBP14.01□□□□□ -0.17
CLCN4-203ENST00000421085 USP26Q9BXU7 913 aa14.01□□□□□ -0.17
CLCN4-203ENST00000421085 ATP5J2-PTCD1G3V325 749 aa14.01□□□□□ -0.17
CLCN4-203ENST00000421085 TERF1P54274 439 aa14.01□□□□□ -0.17
CLCN4-203ENST00000421085 B4GALNT4Q76KP1 1039 aa14.01□□□□□ -0.17
CLCN4-203ENST00000421085 JARID2Q92833 1246 aaPredicted RBP14.01□□□□□ -0.17
CLCN4-203ENST00000421085 A0A1B0GUA9 196 aa14.01□□□□□ -0.17
CLCN4-203ENST00000421085 LMBR1Q8WVP7 490 aa14.01□□□□□ -0.17
CLCN4-203ENST00000421085 PPP1R9BQ96SB3 815 aa14.01□□□□□ -0.17
CLCN4-203ENST00000421085 NMIQ13287 307 aaPredicted RBP14.01□□□□□ -0.17
CLCN4-203ENST00000421085 UBE3BQ7Z3V4 1068 aa14.01□□□□□ -0.17
CLCN4-203ENST00000421085 ANKRD24Q8TF21 1146 aa14.01□□□□□ -0.17
CLCN4-203ENST00000421085 RLBP1P12271 317 aa14□□□□□ -0.17
CLCN4-203ENST00000421085 RTN1Q16799 776 aa14□□□□□ -0.17
CLCN4-203ENST00000421085 SLC4A8Q2Y0W8 1093 aa14□□□□□ -0.17
CLCN4-203ENST00000421085 PRPHP41219 470 aa14□□□□□ -0.17
CLCN4-203ENST00000421085 ASIC1P78348 528 aa14□□□□□ -0.17
CLCN4-203ENST00000421085 RGS22Q8NE09 1264 aa14□□□□□ -0.17
CLCN4-203ENST00000421085 KCNK9Q9NPC2 374 aa14□□□□□ -0.17
CLCN4-203ENST00000421085 PDE4BQ07343 736 aa14□□□□□ -0.17
CLCN4-203ENST00000421085 ANKIB1Q9P2G1 1089 aa14□□□□□ -0.17
CLCN4-203ENST00000421085 PTPN23Q9H3S7 1636 aa14□□□□□ -0.17
CLCN4-203ENST00000421085 TBCAO75347 108 aaKnown RBP14□□□□□ -0.17
CLCN4-203ENST00000421085 LACTBP83111 547 aaPredicted RBP14□□□□□ -0.17
CLCN4-203ENST00000421085 UBLCP1Q8WVY7 318 aaPredicted RBP14□□□□□ -0.17
CLCN4-203ENST00000421085 CARD6Q9BX69 1037 aa14□□□□□ -0.17
CLCN4-203ENST00000421085 ZBTB3Q9H5J0 574 aa14□□□□□ -0.17
CLCN4-203ENST00000421085 NSD2O96028 1365 aa14□□□□□ -0.17
CLCN4-203ENST00000421085 TMEM110-MUSTN1A8MSY1 372 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 AKR1B15C9JRZ8 316 aaPredicted RBP13.99□□□□□ -0.17
CLCN4-203ENST00000421085 LDHAL6AQ6ZMR3 332 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 INPP5BP32019 993 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 ATP8B2P98198 1209 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 FAM160A1Q05DH4 1040 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 CCDC122Q5T0U0 273 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 APBB1IPQ7Z5R6 666 aaPredicted RBP13.99□□□□□ -0.17
CLCN4-203ENST00000421085 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 CPSF2Q9P2I0 782 aaKnown RBP13.99□□□□□ -0.17
CLCN4-203ENST00000421085 NDUFAB1O14561 156 aa13.99□□□□□ -0.17
CLCN4-203ENST00000421085 TTC21AQ8NDW8 1320 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms