RNA–Protein interactions for RNA: ENST00000420947.3

LINC02028-201, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 3 BASIC

Gene LINC02028, Length 528 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-201ENST00000420947 KCNJ4P48050 445 aa11.28□□□□□ -0.6
LINC02028-201ENST00000420947 TFCP2Q12800 502 aa11.28□□□□□ -0.6
LINC02028-201ENST00000420947 USPL1Q5W0Q7 1092 aa11.28□□□□□ -0.6
LINC02028-201ENST00000420947 DNAJC10Q8IXB1 793 aa11.28□□□□□ -0.6
LINC02028-201ENST00000420947 TTC14Q96N46 770 aa11.28□□□□□ -0.6
LINC02028-201ENST00000420947 BOLA2Q9H3K6 86 aa11.28□□□□□ -0.6
LINC02028-201ENST00000420947 ZBTB3Q9H5J0 574 aa11.28□□□□□ -0.6
LINC02028-201ENST00000420947 ZSWIM6Q9HCJ5 1215 aa11.28□□□□□ -0.6
LINC02028-201ENST00000420947 HELLSQ9NRZ9 838 aa11.28□□□□□ -0.6
LINC02028-201ENST00000420947 DBNLQ9UJU6 430 aaKnown RBP11.28□□□□□ -0.6
LINC02028-201ENST00000420947 PALD1Q9ULE6 856 aa11.28□□□□□ -0.6
LINC02028-201ENST00000420947 MYH7P12883 1935 aa11.28□□□□□ -0.6
LINC02028-201ENST00000420947 SH3TC1Q8TE82 1336 aa11.28□□□□□ -0.6
LINC02028-201ENST00000420947 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.27□□□□□ -0.61
LINC02028-201ENST00000420947 LAMB2P55268 1798 aa11.27□□□□□ -0.61
LINC02028-201ENST00000420947 SLIT2O94813 1529 aa11.27□□□□□ -0.61
LINC02028-201ENST00000420947 GOLGA6L3A6NEY3 463 aa11.27□□□□□ -0.61
LINC02028-201ENST00000420947 MAP4K4O95819 1239 aaPredicted RBP11.27□□□□□ -0.61
LINC02028-201ENST00000420947 ZFYP08048 801 aaPredicted RBP11.27□□□□□ -0.61
LINC02028-201ENST00000420947 HMGB1P09429 215 aaKnown RBP11.27□□□□□ -0.61
LINC02028-201ENST00000420947 DDB1Q16531 1140 aa11.27□□□□□ -0.61
LINC02028-201ENST00000420947 KBTBD3Q8NAB2 608 aa11.27□□□□□ -0.61
LINC02028-201ENST00000420947 ASAP1Q9ULH1 1129 aa11.27□□□□□ -0.61
LINC02028-201ENST00000420947 CHMP3Q9Y3E7 222 aa11.27□□□□□ -0.61
LINC02028-201ENST00000420947 BRD1O95696 1058 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 MBD3O95983 291 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 SSFA2P28290 1259 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 MRE11P49959 708 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 NMIQ13287 307 aaPredicted RBP11.26□□□□□ -0.61
LINC02028-201ENST00000420947 IFIT5Q13325 482 aaKnown RBP11.26□□□□□ -0.61
LINC02028-201ENST00000420947 CSPP1Q1MSJ5 1256 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 MCMDC2Q4G0Z9 681 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 PARP10Q53GL7 1025 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 TAF7LQ5H9L4 462 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 CCDC158Q5M9N0 1113 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 RUFY3Q7L099 469 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 ATG9AQ7Z3C6 839 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 ZNF512BQ96KM6 892 aaPredicted RBP11.26□□□□□ -0.61
LINC02028-201ENST00000420947 TMEM106CQ9BVX2 250 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 RBM8AQ9Y5S9 174 aaKnown RBP11.26□□□□□ -0.61
LINC02028-201ENST00000420947 SPATA31A5Q5VU36 1347 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 SPATA31A7Q8IWB4 1347 aa11.26□□□□□ -0.61
LINC02028-201ENST00000420947 RPAP1Q9BWH6 1393 aaPredicted RBP11.26□□□□□ -0.61
LINC02028-201ENST00000420947 FSD2A1L4K1 749 aa11.25□□□□□ -0.61
LINC02028-201ENST00000420947 CASTP20810 708 aaKnown RBP11.25□□□□□ -0.61
LINC02028-201ENST00000420947 PDCP20941 246 aa11.25□□□□□ -0.61
LINC02028-201ENST00000420947 PIP4K2AP48426 406 aaPredicted RBP11.25□□□□□ -0.61
LINC02028-201ENST00000420947 CREB3L3Q68CJ9 461 aa11.25□□□□□ -0.61
LINC02028-201ENST00000420947 PDRG1Q9NUG6 133 aa11.25□□□□□ -0.61
LINC02028-201ENST00000420947 ARAP2Q8WZ64 1704 aa11.24□□□□□ -0.61
LINC02028-201ENST00000420947 ANKRD18BA2A2Z9 1011 aa11.24□□□□□ -0.61
LINC02028-201ENST00000420947 PDE8AO60658 829 aa11.24□□□□□ -0.61
LINC02028-201ENST00000420947 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
LINC02028-201ENST00000420947 ZSCAN25Q6NSZ9 544 aa11.24□□□□□ -0.61
LINC02028-201ENST00000420947 PRPF40BQ6NWY9 871 aaKnown RBP11.24□□□□□ -0.61
LINC02028-201ENST00000420947 BLOC1S2Q6QNY1 142 aa11.24□□□□□ -0.61
LINC02028-201ENST00000420947 NLRP10Q86W26 655 aa11.24□□□□□ -0.61
LINC02028-201ENST00000420947 IFNL1Q8IU54 200 aa11.24□□□□□ -0.61
LINC02028-201ENST00000420947 KLHDC4Q8TBB5 520 aa11.24□□□□□ -0.61
LINC02028-201ENST00000420947 JAKMIP1Q96N16 626 aaKnown RBP11.24□□□□□ -0.61
LINC02028-201ENST00000420947 DBNDD2Q9BQY9 259 aa11.24□□□□□ -0.61
LINC02028-201ENST00000420947 DSCC1Q9BVC3 393 aa11.24□□□□□ -0.61
LINC02028-201ENST00000420947 IL25Q9H293 177 aa11.24□□□□□ -0.61
LINC02028-201ENST00000420947 PAG1Q9NWQ8 432 aa11.24□□□□□ -0.61
LINC02028-201ENST00000420947 TLR7Q9NYK1 1049 aaKnown RBP11.24□□□□□ -0.61
LINC02028-201ENST00000420947 COL5A3P25940 1745 aaPredicted RBP11.23□□□□□ -0.61
LINC02028-201ENST00000420947 A0A1B0GUL7 405 aa11.23□□□□□ -0.61
LINC02028-201ENST00000420947 SLC27A2O14975 620 aa11.23□□□□□ -0.61
LINC02028-201ENST00000420947 TAF5LO75529 589 aa11.23□□□□□ -0.61
LINC02028-201ENST00000420947 IFIT1P09914 478 aaKnown RBP11.23□□□□□ -0.61
LINC02028-201ENST00000420947 NCLP19338 710 aaKnown RBP11.23□□□□□ -0.61
LINC02028-201ENST00000420947 AK2P54819 239 aa11.23□□□□□ -0.61
LINC02028-201ENST00000420947 PTH1RQ03431 593 aa11.23□□□□□ -0.61
LINC02028-201ENST00000420947 TTF1Q15361 905 aaPredicted RBP11.23□□□□□ -0.61
LINC02028-201ENST00000420947 ZGPATQ8N5A5 531 aaKnown RBP11.23□□□□□ -0.61
LINC02028-201ENST00000420947 SYAP1Q96A49 352 aaPredicted RBP11.23□□□□□ -0.61
LINC02028-201ENST00000420947 NEUROD6Q96NK8 337 aa11.23□□□□□ -0.61
LINC02028-201ENST00000420947 UPF3BQ9BZI7 483 aaKnown RBP11.23□□□□□ -0.61
LINC02028-201ENST00000420947 SMC3Q9UQE7 1217 aa11.23□□□□□ -0.61
LINC02028-201ENST00000420947 ZNF652Q9Y2D9 606 aa11.23□□□□□ -0.61
LINC02028-201ENST00000420947 DDX49Q9Y6V7 483 aaKnown RBP11.23□□□□□ -0.61
LINC02028-201ENST00000420947 RTL9Q8NET4 1388 aa11.23□□□□□ -0.61
LINC02028-201ENST00000420947 BCORQ6W2J9 1755 aa11.23□□□□□ -0.61
LINC02028-201ENST00000420947 A0A0D9SFI3 127 aa11.22□□□□□ -0.61
LINC02028-201ENST00000420947 LRP5O75197 1615 aa11.22□□□□□ -0.61
LINC02028-201ENST00000420947 HMGB2P26583 209 aaKnown RBP11.22□□□□□ -0.61
LINC02028-201ENST00000420947 EIF5P55010 431 aaKnown RBP11.22□□□□□ -0.61
LINC02028-201ENST00000420947 CTSWP56202 376 aa11.22□□□□□ -0.61
LINC02028-201ENST00000420947 GORABQ5T7V8 394 aa11.22□□□□□ -0.61
LINC02028-201ENST00000420947 DZIP3Q86Y13 1208 aaKnown RBP11.22□□□□□ -0.61
LINC02028-201ENST00000420947 ZNF34Q8IZ26 560 aa11.22□□□□□ -0.61
LINC02028-201ENST00000420947 FAM227BQ96M60 508 aa11.22□□□□□ -0.61
LINC02028-201ENST00000420947 CCDC87Q9NVE4 849 aa11.22□□□□□ -0.61
LINC02028-201ENST00000420947 CTNNA3Q9UI47 895 aa11.22□□□□□ -0.61
LINC02028-201ENST00000420947 MROH5Q6ZUA9 1318 aa11.21□□□□□ -0.61
LINC02028-201ENST00000420947 UQCRFS1P1P0C7P4 283 aa11.21□□□□□ -0.61
LINC02028-201ENST00000420947 RPS6KB1P23443 525 aa11.21□□□□□ -0.61
LINC02028-201ENST00000420947 PRIM1P49642 420 aaKnown RBP11.21□□□□□ -0.61
LINC02028-201ENST00000420947 NUBP1P53384 320 aa11.21□□□□□ -0.61
LINC02028-201ENST00000420947 TTC39AQ5SRH9 613 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms