RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 KBTBD3Q8NAB2 608 aa10.55□□□□□ -0.72
SNCA-206ENST00000420646 ITGB4P16144 1822 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 LOC102724428A0A0B4J2F2 783 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 CYP21A2P08686 494 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 SIK1P57059 783 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 TTLL5Q6EMB2 1281 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 POTEAQ6S8J7 498 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 CHST3Q7LGC8 479 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 IL17RAQ96F46 866 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 TJP1Q07157 1748 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 FSD2A1L4K1 749 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 HIP1O00291 1037 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 METTL24Q5JXM2 366 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 SUSD4Q5VX71 490 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 CLEC17AQ6ZS10 378 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 SEC31BQ9NQW1 1179 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 PAPPAQ13219 1627 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 NUP188Q5SRE5 1749 aa10.54□□□□□ -0.72
SNCA-206ENST00000420646 GADD45BO75293 160 aaPredicted RBP10.53□□□□□ -0.72
SNCA-206ENST00000420646 CSF1RP07333 972 aa10.53□□□□□ -0.72
SNCA-206ENST00000420646 SYT1P21579 422 aa10.53□□□□□ -0.72
SNCA-206ENST00000420646 TRIM28Q13263 835 aaKnown RBP10.53□□□□□ -0.72
SNCA-206ENST00000420646 MCMDC2Q4G0Z9 681 aa10.53□□□□□ -0.72
SNCA-206ENST00000420646 NGLY1Q96IV0 654 aa10.53□□□□□ -0.72
SNCA-206ENST00000420646 CNNM1Q9NRU3 951 aa10.53□□□□□ -0.72
SNCA-206ENST00000420646 WTIPA6NIX2 430 aaPredicted RBP10.53□□□□□ -0.72
SNCA-206ENST00000420646 GJB2P29033 226 aa10.53□□□□□ -0.72
SNCA-206ENST00000420646 ZAP70P43403 619 aa10.53□□□□□ -0.72
SNCA-206ENST00000420646 INTS4Q96HW7 963 aaKnown RBP10.53□□□□□ -0.72
SNCA-206ENST00000420646 UTRNP46939 3433 aa10.53□□□□□ -0.72
SNCA-206ENST00000420646 CTSWP56202 376 aa10.53□□□□□ -0.72
SNCA-206ENST00000420646 FAM173BQ6P4H8 233 aa10.53□□□□□ -0.72
SNCA-206ENST00000420646 BLOC1S2Q6QNY1 142 aa10.53□□□□□ -0.72
SNCA-206ENST00000420646 STOX1Q6ZVD7 989 aa10.53□□□□□ -0.72
SNCA-206ENST00000420646 SMC3Q9UQE7 1217 aa10.53□□□□□ -0.72
SNCA-206ENST00000420646 RPAP1Q9BWH6 1393 aaPredicted RBP10.53□□□□□ -0.72
SNCA-206ENST00000420646 M0R2C6 588 aa10.52□□□□□ -0.72
SNCA-206ENST00000420646 HAND2P61296 217 aa10.52□□□□□ -0.72
SNCA-206ENST00000420646 TTC39AQ5SRH9 613 aa10.52□□□□□ -0.72
SNCA-206ENST00000420646 BICDL1Q6ZP65 573 aa10.52□□□□□ -0.72
SNCA-206ENST00000420646 FERMT3Q86UX7 667 aa10.52□□□□□ -0.72
SNCA-206ENST00000420646 CCDC24Q8N4L8 307 aa10.52□□□□□ -0.72
SNCA-206ENST00000420646 KCNB2Q92953 911 aa10.52□□□□□ -0.72
SNCA-206ENST00000420646 OSBP2Q969R2 916 aa10.52□□□□□ -0.72
SNCA-206ENST00000420646 RIPOR2Q9Y4F9 1068 aa10.52□□□□□ -0.72
SNCA-206ENST00000420646 SPATA31A5Q5VU36 1347 aa10.52□□□□□ -0.73
SNCA-206ENST00000420646 SPATA31A7Q8IWB4 1347 aa10.52□□□□□ -0.73
SNCA-206ENST00000420646 EPB41L2O43491 1005 aaKnown RBP10.52□□□□□ -0.73
SNCA-206ENST00000420646 EIF5P55010 431 aaKnown RBP10.52□□□□□ -0.73
SNCA-206ENST00000420646 TOB2Q14106 344 aaPredicted RBP10.52□□□□□ -0.73
SNCA-206ENST00000420646 WASHC4Q2M389 1173 aa10.52□□□□□ -0.73
SNCA-206ENST00000420646 KLHL40Q2TBA0 621 aa10.52□□□□□ -0.73
SNCA-206ENST00000420646 RGS17Q9UGC6 210 aaPredicted RBP10.52□□□□□ -0.73
SNCA-206ENST00000420646 COL14A1Q05707 1796 aaKnown RBP10.52□□□□□ -0.73
SNCA-206ENST00000420646 IL6STP40189 918 aaPredicted RBP10.51□□□□□ -0.73
SNCA-206ENST00000420646 GRPEL1Q9HAV7 217 aa10.51□□□□□ -0.73
SNCA-206ENST00000420646 CCDC87Q9NVE4 849 aa10.51□□□□□ -0.73
SNCA-206ENST00000420646 VPS37CA5D8V6 355 aaPredicted RBP10.51□□□□□ -0.73
SNCA-206ENST00000420646 CIAO1O76071 339 aa10.51□□□□□ -0.73
SNCA-206ENST00000420646 ATP2B3Q16720 1220 aa10.51□□□□□ -0.73
SNCA-206ENST00000420646 CNPY2Q9Y2B0 182 aa10.51□□□□□ -0.73
SNCA-206ENST00000420646 MAST3O60307 1309 aa10.51□□□□□ -0.73
SNCA-206ENST00000420646 ANKRD18BA2A2Z9 1011 aa10.51□□□□□ -0.73
SNCA-206ENST00000420646 RPS6KB1P23443 525 aa10.51□□□□□ -0.73
SNCA-206ENST00000420646 MCAMP43121 646 aa10.51□□□□□ -0.73
SNCA-206ENST00000420646 SKOR2Q2VWA4 1001 aaPredicted RBP10.51□□□□□ -0.73
SNCA-206ENST00000420646 CCDC158Q5M9N0 1113 aa10.51□□□□□ -0.73
SNCA-206ENST00000420646 RNF20Q5VTR2 975 aa10.51□□□□□ -0.73
SNCA-206ENST00000420646 PUS7LQ9H0K6 701 aaKnown RBP10.51□□□□□ -0.73
SNCA-206ENST00000420646 TMEM63CQ9P1W3 806 aa10.51□□□□□ -0.73
SNCA-206ENST00000420646 NIP7Q9Y221 180 aaKnown RBP eCLIP10.51□□□□□ -0.73
SNCA-206ENST00000420646 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.5□□□□□ -0.73
SNCA-206ENST00000420646 STX6O43752 255 aa10.5□□□□□ -0.73
SNCA-206ENST00000420646 HSPD1P10809 573 aaKnown RBP10.5□□□□□ -0.73
SNCA-206ENST00000420646 FOSBP53539 338 aa10.5□□□□□ -0.73
SNCA-206ENST00000420646 ZSCAN23Q3MJ62 389 aa10.5□□□□□ -0.73
SNCA-206ENST00000420646 ZNF34Q8IZ26 560 aa10.5□□□□□ -0.73
SNCA-206ENST00000420646 TM6SF1Q9BZW5 370 aa10.5□□□□□ -0.73
SNCA-206ENST00000420646 GPHNQ9NQX3 736 aaPredicted RBP10.5□□□□□ -0.73
SNCA-206ENST00000420646 SLIT2O94813 1529 aa10.5□□□□□ -0.73
SNCA-206ENST00000420646 JAK2O60674 1132 aa10.5□□□□□ -0.73
SNCA-206ENST00000420646 PHKA1P46020 1223 aa10.5□□□□□ -0.73
SNCA-206ENST00000420646 Q6ZUG5 572 aa10.5□□□□□ -0.73
SNCA-206ENST00000420646 USP48Q86UV5 1035 aa10.5□□□□□ -0.73
SNCA-206ENST00000420646 NEK1Q96PY6 1258 aa10.5□□□□□ -0.73
SNCA-206ENST00000420646 NAP1L2Q9ULW6 460 aaPredicted RBP10.5□□□□□ -0.73
SNCA-206ENST00000420646 PALLDQ8WX93 1383 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 RNF113AO15541 343 aaKnown RBP10.49□□□□□ -0.73
SNCA-206ENST00000420646 USPL1Q5W0Q7 1092 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 BRF1Q92994 677 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 DDX11Q96FC9 970 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 PLA2G12BQ9BX93 195 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 GPR108Q9NPR9 543 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 IQSEC3Q9UPP2 1182 aaPredicted RBP10.49□□□□□ -0.73
SNCA-206ENST00000420646 SYCE3A1L190 88 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 FIBPO43427 364 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 PSMA5P28066 241 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 ZMYM1Q5SVZ6 1142 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 RAB11FIP4Q86YS3 637 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms