RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 ZNF646O15015 1829 aaPredicted RBP22.26■■□□□ 1.15
PTCD1-202ENST00000419981 SHTN1A0MZ66 631 aa22.25■■□□□ 1.15
PTCD1-202ENST00000419981 CCDC27Q2M243 656 aa22.25■■□□□ 1.15
PTCD1-202ENST00000419981 DPF2Q92785 391 aa22.25■■□□□ 1.15
PTCD1-202ENST00000419981 STK31Q9BXU1 1019 aa22.25■■□□□ 1.15
PTCD1-202ENST00000419981 MAP3K2Q9Y2U5 619 aa22.25■■□□□ 1.15
PTCD1-202ENST00000419981 CELF2O95319 508 aaKnown RBP22.24■■□□□ 1.15
PTCD1-202ENST00000419981 GRM1Q13255 1194 aa22.24■■□□□ 1.15
PTCD1-202ENST00000419981 DOK7Q18PE1 504 aa22.24■■□□□ 1.15
PTCD1-202ENST00000419981 CYP4F22Q6NT55 531 aa22.24■■□□□ 1.15
PTCD1-202ENST00000419981 JARID2Q92833 1246 aaPredicted RBP22.24■■□□□ 1.15
PTCD1-202ENST00000419981 GPR101Q96P66 508 aaPredicted RBP22.24■■□□□ 1.15
PTCD1-202ENST00000419981 PODXL2Q9NZ53 605 aa22.24■■□□□ 1.15
PTCD1-202ENST00000419981 ANKIB1Q9P2G1 1089 aa22.24■■□□□ 1.15
PTCD1-202ENST00000419981 UFL1O94874 794 aa22.23■■□□□ 1.15
PTCD1-202ENST00000419981 RPS12P25398 132 aaKnown RBP22.23■■□□□ 1.15
PTCD1-202ENST00000419981 LBX1P52954 281 aa22.23■■□□□ 1.15
PTCD1-202ENST00000419981 KSR2Q6VAB6 950 aa22.23■■□□□ 1.15
PTCD1-202ENST00000419981 CDC37L1Q7L3B6 337 aa22.23■■□□□ 1.15
PTCD1-202ENST00000419981 WWC1Q8IX03 1113 aa22.23■■□□□ 1.15
PTCD1-202ENST00000419981 CCDC85AQ96PX6 553 aaPredicted RBP22.23■■□□□ 1.15
PTCD1-202ENST00000419981 ZC3H12CQ9C0D7 883 aaKnown RBP22.23■■□□□ 1.15
PTCD1-202ENST00000419981 RTL9Q8NET4 1388 aa22.23■■□□□ 1.15
PTCD1-202ENST00000419981 A0A1B0GUL6 1792 aa22.22■■□□□ 1.15
PTCD1-202ENST00000419981 AKAP11Q9UKA4 1901 aa22.22■■□□□ 1.15
PTCD1-202ENST00000419981 PI4KAP2A4QPH2 592 aa22.22■■□□□ 1.15
PTCD1-202ENST00000419981 PI4KAP1Q8N8J0 262 aa22.22■■□□□ 1.15
PTCD1-202ENST00000419981 ZNF408Q9H9D4 720 aa22.22■■□□□ 1.15
PTCD1-202ENST00000419981 GGA1Q9UJY5 639 aa22.22■■□□□ 1.15
PTCD1-202ENST00000419981 G3V3G9 751 aa22.21■■□□□ 1.15
PTCD1-202ENST00000419981 NEXNQ0ZGT2 675 aa22.21■■□□□ 1.15
PTCD1-202ENST00000419981 TWISTNBQ3B726 338 aaPredicted RBP22.21■■□□□ 1.15
PTCD1-202ENST00000419981 DCAF8Q5TAQ9 597 aa22.21■■□□□ 1.15
PTCD1-202ENST00000419981 SAMD7Q7Z3H4 446 aa22.21■■□□□ 1.15
PTCD1-202ENST00000419981 SAPCD2Q86UD0 394 aa22.21■■□□□ 1.15
PTCD1-202ENST00000419981 ANKRD18AQ8IVF6 992 aa22.21■■□□□ 1.15
PTCD1-202ENST00000419981 KCNQ5Q9NR82 932 aa22.21■■□□□ 1.15
PTCD1-202ENST00000419981 IGKV5-2P06315 115 aa22.2■■□□□ 1.14
PTCD1-202ENST00000419981 HSPA8P11142 646 aaKnown RBP22.2■■□□□ 1.14
PTCD1-202ENST00000419981 IL16Q14005 1332 aa22.2■■□□□ 1.14
PTCD1-202ENST00000419981 CASP8AP2Q9UKL3 1982 aa22.19■■□□□ 1.14
PTCD1-202ENST00000419981 CTSWP56202 376 aa22.19■■□□□ 1.14
PTCD1-202ENST00000419981 TBC1D10BQ4KMP7 808 aaPredicted RBP22.19■■□□□ 1.14
PTCD1-202ENST00000419981 HHIPL1Q96JK4 782 aa22.19■■□□□ 1.14
PTCD1-202ENST00000419981 BEGAINQ9BUH8 593 aa22.19■■□□□ 1.14
PTCD1-202ENST00000419981 XDHP47989 1333 aa22.19■■□□□ 1.14
PTCD1-202ENST00000419981 CDC5LQ99459 802 aaKnown RBP22.18■■□□□ 1.14
PTCD1-202ENST00000419981 MRS2Q9HD23 443 aa22.18■■□□□ 1.14
PTCD1-202ENST00000419981 ZNF609O15014 1411 aa22.17■■□□□ 1.14
PTCD1-202ENST00000419981 EGFRP00533 1210 aa22.17■■□□□ 1.14
PTCD1-202ENST00000419981 VIL1P09327 827 aaKnown RBP22.17■■□□□ 1.14
PTCD1-202ENST00000419981 CWF19L2Q2TBE0 894 aaKnown RBP22.17■■□□□ 1.14
PTCD1-202ENST00000419981 USP48Q86UV5 1035 aa22.17■■□□□ 1.14
PTCD1-202ENST00000419981 NEURL1BA8MQ27 555 aa22.16■■□□□ 1.14
PTCD1-202ENST00000419981 AOC2O75106 756 aa22.16■■□□□ 1.14
PTCD1-202ENST00000419981 SLC4A2P04920 1241 aa22.16■■□□□ 1.14
PTCD1-202ENST00000419981 MAP2K2P36507 400 aa22.16■■□□□ 1.14
PTCD1-202ENST00000419981 NCBP3Q53F19 620 aaKnown RBP22.16■■□□□ 1.14
PTCD1-202ENST00000419981 RBM26Q5T8P6 1007 aaKnown RBP22.16■■□□□ 1.14
PTCD1-202ENST00000419981 G2E3Q7L622 706 aa22.16■■□□□ 1.14
PTCD1-202ENST00000419981 ATP2B4P23634 1241 aa22.15■■□□□ 1.14
PTCD1-202ENST00000419981 KIF4BQ2VIQ3 1234 aa22.15■■□□□ 1.14
PTCD1-202ENST00000419981 KRT26Q7Z3Y9 468 aa22.15■■□□□ 1.14
PTCD1-202ENST00000419981 TTLL11Q8NHH1 800 aa22.15■■□□□ 1.14
PTCD1-202ENST00000419981 DCPSQ96C86 337 aaKnown RBP22.15■■□□□ 1.14
PTCD1-202ENST00000419981 ANP32CO43423 234 aa22.14■■□□□ 1.13
PTCD1-202ENST00000419981 UBE3BQ7Z3V4 1068 aa22.14■■□□□ 1.13
PTCD1-202ENST00000419981 GREM2Q9H772 168 aa22.14■■□□□ 1.13
PTCD1-202ENST00000419981 ECM29Q5VYK3 1845 aa22.13■■□□□ 1.13
PTCD1-202ENST00000419981 FANCIQ9NVI1 1328 aa22.13■■□□□ 1.13
PTCD1-202ENST00000419981 ZEB1P37275 1124 aaPredicted RBP22.13■■□□□ 1.13
PTCD1-202ENST00000419981 FLIIQ13045 1269 aa22.13■■□□□ 1.13
PTCD1-202ENST00000419981 AGBL3Q8NEM8 1001 aa22.13■■□□□ 1.13
PTCD1-202ENST00000419981 RSBN1LQ6PCB5 846 aaPredicted RBP22.12■■□□□ 1.13
PTCD1-202ENST00000419981 BSDC1Q9NW68 430 aaPredicted RBP22.12■■□□□ 1.13
PTCD1-202ENST00000419981 MED23Q9ULK4 1368 aa22.12■■□□□ 1.13
PTCD1-202ENST00000419981 ADM5C9JUS6 153 aa22.11■■□□□ 1.13
PTCD1-202ENST00000419981 H7C1W4 665 aa22.11■■□□□ 1.13
PTCD1-202ENST00000419981 HUNKP57058 714 aa22.11■■□□□ 1.13
PTCD1-202ENST00000419981 FKBP5Q13451 457 aaPredicted RBP22.11■■□□□ 1.13
PTCD1-202ENST00000419981 DLK2Q6UY11 383 aa22.11■■□□□ 1.13
PTCD1-202ENST00000419981 GGA3Q9NZ52 723 aa22.11■■□□□ 1.13
PTCD1-202ENST00000419981 PODNQ7Z5L7 613 aa22.1■■□□□ 1.13
PTCD1-202ENST00000419981 GBA2Q9HCG7 927 aaPredicted RBP22.1■■□□□ 1.13
PTCD1-202ENST00000419981 MINPP1Q9UNW1 487 aa22.1■■□□□ 1.13
PTCD1-202ENST00000419981 SALL2Q9Y467 1007 aaPredicted RBP22.1■■□□□ 1.13
PTCD1-202ENST00000419981 PAPPA2Q9BXP8 1791 aa22.1■■□□□ 1.13
PTCD1-202ENST00000419981 USP17L3A6NCW0 530 aa22.09■■□□□ 1.13
PTCD1-202ENST00000419981 USP17L4A6NCW7 530 aa22.09■■□□□ 1.13
PTCD1-202ENST00000419981 IGHMBP2P38935 993 aaKnown RBP22.09■■□□□ 1.13
PTCD1-202ENST00000419981 BRPF1P55201 1214 aaPredicted RBP22.09■■□□□ 1.13
PTCD1-202ENST00000419981 ZNF280AP59817 542 aaPredicted RBP22.09■■□□□ 1.13
PTCD1-202ENST00000419981 GCKRQ14397 625 aa22.09■■□□□ 1.13
PTCD1-202ENST00000419981 USP17L1Q7RTZ2 530 aa22.09■■□□□ 1.13
PTCD1-202ENST00000419981 WDR63Q8IWG1 891 aa22.09■■□□□ 1.13
PTCD1-202ENST00000419981 SULF1Q8IWU6 871 aa22.09■■□□□ 1.13
PTCD1-202ENST00000419981 C2orf69Q8N8R5 385 aa22.09■■□□□ 1.13
PTCD1-202ENST00000419981 DNAAF4Q8WXU2 420 aa22.09■■□□□ 1.13
PTCD1-202ENST00000419981 PLA2G12BQ9BX93 195 aa22.09■■□□□ 1.13
PTCD1-202ENST00000419981 MYH16Q9H6N6 1097 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms