RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 RIC1Q4ADV7 1423 aa17.35■□□□□ 0.37
HLA-DPA1-242ENST00000419277 STX6O43752 255 aa17.34■□□□□ 0.37
HLA-DPA1-242ENST00000419277 PHF14O94880 888 aa17.34■□□□□ 0.37
HLA-DPA1-242ENST00000419277 NCLP19338 710 aaKnown RBP17.34■□□□□ 0.37
HLA-DPA1-242ENST00000419277 ZNF589Q86UQ0 364 aaPredicted RBP17.34■□□□□ 0.37
HLA-DPA1-242ENST00000419277 DZIP3Q86Y13 1208 aaKnown RBP17.34■□□□□ 0.37
HLA-DPA1-242ENST00000419277 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
HLA-DPA1-242ENST00000419277 ZSCAN22P10073 491 aaPredicted RBP17.33■□□□□ 0.37
HLA-DPA1-242ENST00000419277 EIF5P55010 431 aaKnown RBP17.33■□□□□ 0.37
HLA-DPA1-242ENST00000419277 ADCK5Q3MIX3 580 aa17.33■□□□□ 0.37
HLA-DPA1-242ENST00000419277 ZNF34Q8IZ26 560 aa17.33■□□□□ 0.37
HLA-DPA1-242ENST00000419277 CCDC87Q9NVE4 849 aa17.33■□□□□ 0.37
HLA-DPA1-242ENST00000419277 ATRNO75882 1429 aa17.33■□□□□ 0.36
HLA-DPA1-242ENST00000419277 PRIM1P49642 420 aaKnown RBP17.33■□□□□ 0.36
HLA-DPA1-242ENST00000419277 TTF1Q15361 905 aaPredicted RBP17.33■□□□□ 0.36
HLA-DPA1-242ENST00000419277 LRRC24Q50LG9 513 aa17.33■□□□□ 0.36
HLA-DPA1-242ENST00000419277 TTC39AQ5SRH9 613 aa17.33■□□□□ 0.36
HLA-DPA1-242ENST00000419277 GORABQ5T7V8 394 aa17.33■□□□□ 0.36
HLA-DPA1-242ENST00000419277 ZSCAN25Q6NSZ9 544 aa17.33■□□□□ 0.36
HLA-DPA1-242ENST00000419277 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.36
HLA-DPA1-242ENST00000419277 SLC4A9Q96Q91 983 aa17.33■□□□□ 0.36
HLA-DPA1-242ENST00000419277 MROH5Q6ZUA9 1318 aa17.32■□□□□ 0.36
HLA-DPA1-242ENST00000419277 RNF113AO15541 343 aaKnown RBP17.32■□□□□ 0.36
HLA-DPA1-242ENST00000419277 NOL8Q76FK4 1167 aaKnown RBP17.32■□□□□ 0.36
HLA-DPA1-242ENST00000419277 DDX46Q7L014 1031 aaKnown RBP17.32■□□□□ 0.36
HLA-DPA1-242ENST00000419277 SYTL4Q96C24 671 aaPredicted RBP17.32■□□□□ 0.36
HLA-DPA1-242ENST00000419277 FAM89AQ96GI7 184 aa17.32■□□□□ 0.36
HLA-DPA1-242ENST00000419277 NEK1Q96PY6 1258 aa17.32■□□□□ 0.36
HLA-DPA1-242ENST00000419277 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.32■□□□□ 0.36
HLA-DPA1-242ENST00000419277 CTNNA3Q9UI47 895 aa17.32■□□□□ 0.36
HLA-DPA1-242ENST00000419277 ZNF652Q9Y2D9 606 aa17.32■□□□□ 0.36
HLA-DPA1-242ENST00000419277 LAMA4Q16363 1823 aa17.31■□□□□ 0.36
HLA-DPA1-242ENST00000419277 GOLIM4O00461 696 aa17.31■□□□□ 0.36
HLA-DPA1-242ENST00000419277 IRS4O14654 1257 aaPredicted RBP17.31■□□□□ 0.36
HLA-DPA1-242ENST00000419277 FBXL16Q8N461 479 aa17.31■□□□□ 0.36
HLA-DPA1-242ENST00000419277 TRMT112Q9UI30 125 aaKnown RBP17.31■□□□□ 0.36
HLA-DPA1-242ENST00000419277 RIPOR2Q9Y4F9 1068 aa17.31■□□□□ 0.36
HLA-DPA1-242ENST00000419277 AKAP11Q9UKA4 1901 aa17.31■□□□□ 0.36
HLA-DPA1-242ENST00000419277 XRCC6P12956 609 aaKnown RBP eCLIP17.3■□□□□ 0.36
HLA-DPA1-242ENST00000419277 ITGA6P23229 1130 aa17.3■□□□□ 0.36
HLA-DPA1-242ENST00000419277 ATP2B3Q16720 1220 aa17.3■□□□□ 0.36
HLA-DPA1-242ENST00000419277 ANP32BQ92688 251 aaKnown RBP17.3■□□□□ 0.36
HLA-DPA1-242ENST00000419277 XAGE2Q96GT9 111 aa17.3■□□□□ 0.36
HLA-DPA1-242ENST00000419277 KIF3AQ9Y496 699 aa17.3■□□□□ 0.36
HLA-DPA1-242ENST00000419277 DDX60Q8IY21 1712 aaKnown RBP17.3■□□□□ 0.36
HLA-DPA1-242ENST00000419277 PRPF40AO75400 957 aaKnown RBP17.3■□□□□ 0.36
HLA-DPA1-242ENST00000419277 SYT1P21579 422 aa17.3■□□□□ 0.36
HLA-DPA1-242ENST00000419277 TIMM10P62072 90 aa17.3■□□□□ 0.36
HLA-DPA1-242ENST00000419277 LDHAL6AQ6ZMR3 332 aa17.3■□□□□ 0.36
HLA-DPA1-242ENST00000419277 SCN7AQ01118 1682 aa17.29■□□□□ 0.36
HLA-DPA1-242ENST00000419277 LOC102724428A0A0B4J2F2 783 aa17.29■□□□□ 0.36
HLA-DPA1-242ENST00000419277 F13A1P00488 732 aa17.29■□□□□ 0.36
HLA-DPA1-242ENST00000419277 UQCRFS1P1P0C7P4 283 aa17.29■□□□□ 0.36
HLA-DPA1-242ENST00000419277 SIK1P57059 783 aa17.29■□□□□ 0.36
HLA-DPA1-242ENST00000419277 METTL24Q5JXM2 366 aa17.29■□□□□ 0.36
HLA-DPA1-242ENST00000419277 GJB2P29033 226 aa17.28■□□□□ 0.36
HLA-DPA1-242ENST00000419277 HLFQ16534 295 aa17.28■□□□□ 0.36
HLA-DPA1-242ENST00000419277 ME3Q16798 604 aa17.28■□□□□ 0.36
HLA-DPA1-242ENST00000419277 CLEC4GQ6UXB4 293 aa17.28■□□□□ 0.36
HLA-DPA1-242ENST00000419277 EDC3Q96F86 508 aaKnown RBP17.28■□□□□ 0.36
HLA-DPA1-242ENST00000419277 ZNF594Q96JF6 807 aaPredicted RBP17.28■□□□□ 0.36
HLA-DPA1-242ENST00000419277 LLPHQ9BRT6 129 aaKnown RBP17.28■□□□□ 0.36
HLA-DPA1-242ENST00000419277 DOCK2Q92608 1830 aa17.28■□□□□ 0.36
HLA-DPA1-242ENST00000419277 ZSCAN23Q3MJ62 389 aa17.27■□□□□ 0.36
HLA-DPA1-242ENST00000419277 CCDC83Q8IWF9 413 aa17.27■□□□□ 0.36
HLA-DPA1-242ENST00000419277 VGLL2Q8N8G2 317 aa17.27■□□□□ 0.36
HLA-DPA1-242ENST00000419277 APPBP2Q92624 585 aa17.27■□□□□ 0.36
HLA-DPA1-242ENST00000419277 AGXT2Q9BYV1 514 aa17.27■□□□□ 0.36
HLA-DPA1-242ENST00000419277 CNNM1Q9NRU3 951 aa17.27■□□□□ 0.36
HLA-DPA1-242ENST00000419277 TCHHQ07283 1943 aa17.27■□□□□ 0.36
HLA-DPA1-242ENST00000419277 MYH14Q7Z406 1995 aaKnown RBP17.27■□□□□ 0.35
HLA-DPA1-242ENST00000419277 LETM1O95202 739 aaPredicted RBP17.27■□□□□ 0.35
HLA-DPA1-242ENST00000419277 PDE8BO95263 885 aa17.27■□□□□ 0.35
HLA-DPA1-242ENST00000419277 ADAMTS2O95450 1211 aa17.27■□□□□ 0.35
HLA-DPA1-242ENST00000419277 CYP21A2P08686 494 aa17.27■□□□□ 0.35
HLA-DPA1-242ENST00000419277 ATP6V1AP38606 617 aa17.27■□□□□ 0.35
HLA-DPA1-242ENST00000419277 CRKLP46109 303 aaKnown RBP17.27■□□□□ 0.35
HLA-DPA1-242ENST00000419277 PUM3Q15397 648 aaKnown RBP17.27■□□□□ 0.35
HLA-DPA1-242ENST00000419277 CAVIN1Q6NZI2 390 aaKnown RBP17.27■□□□□ 0.35
HLA-DPA1-242ENST00000419277 PUS3Q9BZE2 481 aaKnown RBP17.27■□□□□ 0.35
HLA-DPA1-242ENST00000419277 GREM2Q9H772 168 aa17.27■□□□□ 0.35
HLA-DPA1-242ENST00000419277 TPCN1Q9ULQ1 816 aa17.27■□□□□ 0.35
HLA-DPA1-242ENST00000419277 MAST3O60307 1309 aa17.26■□□□□ 0.35
HLA-DPA1-242ENST00000419277 WDR19Q8NEZ3 1342 aa17.26■□□□□ 0.35
HLA-DPA1-242ENST00000419277 GPTP24298 496 aa17.26■□□□□ 0.35
HLA-DPA1-242ENST00000419277 INTS5Q6P9B9 1019 aaKnown RBP17.26■□□□□ 0.35
HLA-DPA1-242ENST00000419277 DHX32Q7L7V1 743 aaKnown RBP17.26■□□□□ 0.35
HLA-DPA1-242ENST00000419277 MARCH10Q8NA82 808 aaPredicted RBP17.26■□□□□ 0.35
HLA-DPA1-242ENST00000419277 LPIN2Q92539 896 aa17.26■□□□□ 0.35
HLA-DPA1-242ENST00000419277 ARXQ96QS3 562 aa17.26■□□□□ 0.35
HLA-DPA1-242ENST00000419277 UTP14AQ9BVJ6 771 aaKnown RBP17.26■□□□□ 0.35
HLA-DPA1-242ENST00000419277 NHSQ6T4R5 1651 aa17.26■□□□□ 0.35
HLA-DPA1-242ENST00000419277 UBN2Q6ZU65 1347 aa17.25■□□□□ 0.35
HLA-DPA1-242ENST00000419277 HSPD1P10809 573 aaKnown RBP17.25■□□□□ 0.35
HLA-DPA1-242ENST00000419277 ARID4AP29374 1257 aaPredicted RBP17.25■□□□□ 0.35
HLA-DPA1-242ENST00000419277 UBE2HP62256 183 aa17.25■□□□□ 0.35
HLA-DPA1-242ENST00000419277 TOB2Q14106 344 aaPredicted RBP17.25■□□□□ 0.35
HLA-DPA1-242ENST00000419277 VPS72Q15906 364 aa17.25■□□□□ 0.35
HLA-DPA1-242ENST00000419277 CCDC152Q4G0S7 254 aa17.25■□□□□ 0.35
HLA-DPA1-242ENST00000419277 RGS22Q8NE09 1264 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms