RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 HSP90B1P14625 803 aaKnown RBP10.9□□□□□ -0.66
LINCMD1-201ENST00000418518 PTMSP20962 102 aa10.9□□□□□ -0.66
LINCMD1-201ENST00000418518 ZNF589Q86UQ0 364 aaPredicted RBP10.9□□□□□ -0.66
LINCMD1-201ENST00000418518 EDC3Q96F86 508 aaKnown RBP10.9□□□□□ -0.66
LINCMD1-201ENST00000418518 UTP14AQ9BVJ6 771 aaKnown RBP10.9□□□□□ -0.66
LINCMD1-201ENST00000418518 GREM2Q9H772 168 aa10.9□□□□□ -0.66
LINCMD1-201ENST00000418518 ZSWIM6Q9HCJ5 1215 aa10.9□□□□□ -0.66
LINCMD1-201ENST00000418518 PAG1Q9NWQ8 432 aa10.9□□□□□ -0.66
LINCMD1-201ENST00000418518 ZNF652Q9Y2D9 606 aa10.9□□□□□ -0.66
LINCMD1-201ENST00000418518 CHD4Q14839 1912 aa10.9□□□□□ -0.67
LINCMD1-201ENST00000418518 TIMM10P62072 90 aa10.89□□□□□ -0.67
LINCMD1-201ENST00000418518 TAF7LQ5H9L4 462 aa10.89□□□□□ -0.67
LINCMD1-201ENST00000418518 ZMYM1Q5SVZ6 1142 aa10.89□□□□□ -0.67
LINCMD1-201ENST00000418518 SUSD4Q5VX71 490 aa10.89□□□□□ -0.67
LINCMD1-201ENST00000418518 CREB3L3Q68CJ9 461 aa10.89□□□□□ -0.67
LINCMD1-201ENST00000418518 GBP4Q96PP9 640 aa10.89□□□□□ -0.67
LINCMD1-201ENST00000418518 UPF3BQ9BZI7 483 aaKnown RBP10.89□□□□□ -0.67
LINCMD1-201ENST00000418518 ALDH8A1Q9H2A2 487 aaPredicted RBP10.89□□□□□ -0.67
LINCMD1-201ENST00000418518 HELLSQ9NRZ9 838 aa10.89□□□□□ -0.67
LINCMD1-201ENST00000418518 MYH13Q9UKX3 1938 aa10.89□□□□□ -0.67
LINCMD1-201ENST00000418518 TCHHQ07283 1943 aa10.88□□□□□ -0.67
LINCMD1-201ENST00000418518 SLC27A2O14975 620 aa10.88□□□□□ -0.67
LINCMD1-201ENST00000418518 IFIT1P09914 478 aaKnown RBP10.88□□□□□ -0.67
LINCMD1-201ENST00000418518 TAF1P21675 1872 aa10.88□□□□□ -0.67
LINCMD1-201ENST00000418518 FGFR2P21802 821 aa10.88□□□□□ -0.67
LINCMD1-201ENST00000418518 DEKP35659 375 aaKnown RBP10.88□□□□□ -0.67
LINCMD1-201ENST00000418518 VPS53Q5VIR6 699 aa10.88□□□□□ -0.67
LINCMD1-201ENST00000418518 PRPF40BQ6NWY9 871 aaKnown RBP10.88□□□□□ -0.67
LINCMD1-201ENST00000418518 XAGE2Q96GT9 111 aa10.88□□□□□ -0.67
LINCMD1-201ENST00000418518 GJD4Q96KN9 370 aaPredicted RBP10.88□□□□□ -0.67
LINCMD1-201ENST00000418518 NEUROD6Q96NK8 337 aa10.88□□□□□ -0.67
LINCMD1-201ENST00000418518 DNAJC2Q99543 621 aaKnown RBP10.88□□□□□ -0.67
LINCMD1-201ENST00000418518 COL4A1P02462 1669 aa10.88□□□□□ -0.67
LINCMD1-201ENST00000418518 AFF2P51816 1311 aa10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 MROH5Q6ZUA9 1318 aa10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 RPS6KA4O75676 772 aa10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 ZFYP08048 801 aaPredicted RBP10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 ZKSCAN1P17029 563 aaPredicted RBP10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 SSFA2P28290 1259 aa10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 ADORA1P30542 326 aa10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 ATP2B3Q16720 1220 aa10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 LRRFIP1Q32MZ4 808 aaKnown RBP10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 MCMDC2Q4G0Z9 681 aa10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 METTL24Q5JXM2 366 aa10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 CCDC158Q5M9N0 1113 aa10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 RNF20Q5VTR2 975 aa10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 LDHAL6AQ6ZMR3 332 aa10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 DDX46Q7L014 1031 aaKnown RBP10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 ZGPATQ8N5A5 531 aaKnown RBP10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 ARXQ96QS3 562 aa10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 DSCC1Q9BVC3 393 aa10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 U3KPZ7 1027 aaPredicted RBP10.87□□□□□ -0.67
LINCMD1-201ENST00000418518 GOLIM4O00461 696 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 RNF113AO15541 343 aaKnown RBP10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 PDE8BO95263 885 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 CASTP20810 708 aaKnown RBP10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 PSMA5P28066 241 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 ARID4AP29374 1257 aaPredicted RBP10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 HSPA1LP34931 641 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 KRT32Q14532 448 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 GSE1Q14687 1217 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 ADCK5Q3MIX3 580 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 CCDC152Q4G0S7 254 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 TTC39AQ5SRH9 613 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 RUFY3Q7L099 469 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 ZSCAN31Q96LW9 406 aaPredicted RBP10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 JAKMIP1Q96N16 626 aaKnown RBP10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 SH2B1Q9NRF2 756 aaPredicted RBP10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 FOXD4L1Q9NU39 408 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 LIMCH1Q9UPQ0 1083 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 NIP7Q9Y221 180 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 CYP46A1Q9Y6A2 500 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 KIAA1551Q9HCM1 1747 aa10.86□□□□□ -0.67
LINCMD1-201ENST00000418518 A0A0G2JS52 829 aa10.85□□□□□ -0.67
LINCMD1-201ENST00000418518 AK2P54819 239 aa10.85□□□□□ -0.67
LINCMD1-201ENST00000418518 PUM3Q15397 648 aaKnown RBP10.85□□□□□ -0.67
LINCMD1-201ENST00000418518 SLC10A5Q5PT55 438 aa10.85□□□□□ -0.67
LINCMD1-201ENST00000418518 BCL2L12Q9HB09 334 aa10.85□□□□□ -0.67
LINCMD1-201ENST00000418518 CNNM1Q9NRU3 951 aa10.85□□□□□ -0.67
LINCMD1-201ENST00000418518 NARFQ9UHQ1 456 aa10.85□□□□□ -0.67
LINCMD1-201ENST00000418518 TRPC5Q9UL62 973 aaPredicted RBP10.85□□□□□ -0.67
LINCMD1-201ENST00000418518 ZDHHC9Q9Y397 364 aa10.85□□□□□ -0.67
LINCMD1-201ENST00000418518 NDUFB9Q9Y6M9 179 aa10.85□□□□□ -0.67
LINCMD1-201ENST00000418518 TNRC6CQ9HCJ0 1690 aaKnown RBP10.85□□□□□ -0.67
LINCMD1-201ENST00000418518 MAST3O60307 1309 aa10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 BAG4O95429 457 aaKnown RBP10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 BRD1O95696 1058 aa10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 HCLS1P14317 486 aaPredicted RBP10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 RPS6KB1P23443 525 aa10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 KCNJ4P48050 445 aa10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 SCARF1Q14162 830 aa10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 SF3B3Q15393 1217 aaKnown RBP10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 PTF1AQ7RTS3 328 aa10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 LPIN2Q92539 896 aa10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 CCDC85AQ96PX6 553 aaPredicted RBP10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 SEC62Q99442 399 aaKnown RBP10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 PDRG1Q9NUG6 133 aa10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 MAST2Q6P0Q8 1798 aa10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 MYH15Q9Y2K3 1946 aa10.84□□□□□ -0.67
LINCMD1-201ENST00000418518 TIAM2Q8IVF5 1701 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms