RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 SCN9AQ15858 1988 aa26.16■■□□□ 1.78
PKNOX1-202ENST00000418336 A0A1B0GUL6 1792 aa26.16■■□□□ 1.78
PKNOX1-202ENST00000418336 NBPF7P0C2Y1 421 aaPredicted RBP26.16■■□□□ 1.78
PKNOX1-202ENST00000418336 WASHC4Q2M389 1173 aa26.16■■□□□ 1.78
PKNOX1-202ENST00000418336 SMC1BQ8NDV3 1235 aa26.16■■□□□ 1.78
PKNOX1-202ENST00000418336 SMC4Q9NTJ3 1288 aa26.16■■□□□ 1.78
PKNOX1-202ENST00000418336 IQCA1LA6NCM1 817 aa26.15■■□□□ 1.78
PKNOX1-202ENST00000418336 HNRNPUQ00839 825 aaKnown RBP eCLIP26.14■■□□□ 1.78
PKNOX1-202ENST00000418336 SUCLG2Q96I99 432 aa26.14■■□□□ 1.78
PKNOX1-202ENST00000418336 HACL1Q9UJ83 578 aa26.14■■□□□ 1.78
PKNOX1-202ENST00000418336 XDHP47989 1333 aa26.14■■□□□ 1.77
PKNOX1-202ENST00000418336 GJA3Q9Y6H8 435 aa26.13■■□□□ 1.77
PKNOX1-202ENST00000418336 ZNF646O15015 1829 aaPredicted RBP26.12■■□□□ 1.77
PKNOX1-202ENST00000418336 C6orf229H3BNL8 230 aa26.12■■□□□ 1.77
PKNOX1-202ENST00000418336 UFL1O94874 794 aa26.12■■□□□ 1.77
PKNOX1-202ENST00000418336 EPHX2P34913 555 aa26.12■■□□□ 1.77
PKNOX1-202ENST00000418336 EPS15P42566 896 aa26.12■■□□□ 1.77
PKNOX1-202ENST00000418336 LMBR1LQ6UX01 489 aa26.12■■□□□ 1.77
PKNOX1-202ENST00000418336 USP44Q9H0E7 712 aa26.12■■□□□ 1.77
PKNOX1-202ENST00000418336 DBNDD1Q9H9R9 158 aa26.12■■□□□ 1.77
PKNOX1-202ENST00000418336 KCNQ5Q9NR82 932 aa26.12■■□□□ 1.77
PKNOX1-202ENST00000418336 GGA1Q9UJY5 639 aa26.12■■□□□ 1.77
PKNOX1-202ENST00000418336 NOB1Q9ULX3 412 aaKnown RBP26.12■■□□□ 1.77
PKNOX1-202ENST00000418336 RIMBP2O15034 1052 aa26.11■■□□□ 1.77
PKNOX1-202ENST00000418336 C9orf78Q9NZ63 289 aaPredicted RBP26.11■■□□□ 1.77
PKNOX1-202ENST00000418336 ANKIB1Q9P2G1 1089 aa26.11■■□□□ 1.77
PKNOX1-202ENST00000418336 IRS2Q9Y4H2 1338 aa26.11■■□□□ 1.77
PKNOX1-202ENST00000418336 PSME4Q14997 1843 aa26.1■■□□□ 1.77
PKNOX1-202ENST00000418336 RAD17O75943 681 aa26.1■■□□□ 1.77
PKNOX1-202ENST00000418336 CIAPIN1Q6FI81 312 aa26.1■■□□□ 1.77
PKNOX1-202ENST00000418336 EYA3Q99504 573 aa26.1■■□□□ 1.77
PKNOX1-202ENST00000418336 ECE2O60344 883 aa26.09■■□□□ 1.77
PKNOX1-202ENST00000418336 ATP2B4P23634 1241 aa26.09■■□□□ 1.77
PKNOX1-202ENST00000418336 DOK7Q18PE1 504 aa26.09■■□□□ 1.77
PKNOX1-202ENST00000418336 RABL6Q3YEC7 729 aaPredicted RBP26.09■■□□□ 1.77
PKNOX1-202ENST00000418336 CHADLQ6NUI6 762 aa26.09■■□□□ 1.77
PKNOX1-202ENST00000418336 ANKRD44Q8N8A2 993 aa26.09■■□□□ 1.77
PKNOX1-202ENST00000418336 GPRC5DQ9NZD1 345 aa26.09■■□□□ 1.77
PKNOX1-202ENST00000418336 ZBED9Q6R2W3 1325 aa26.09■■□□□ 1.77
PKNOX1-202ENST00000418336 IGHMBP2P38935 993 aaKnown RBP26.08■■□□□ 1.77
PKNOX1-202ENST00000418336 LDHDQ86WU2 507 aa26.08■■□□□ 1.77
PKNOX1-202ENST00000418336 MED23Q9ULK4 1368 aa26.07■■□□□ 1.76
PKNOX1-202ENST00000418336 ANKRD18BA2A2Z9 1011 aa26.07■■□□□ 1.76
PKNOX1-202ENST00000418336 GMPSP49915 693 aaPredicted RBP26.07■■□□□ 1.76
PKNOX1-202ENST00000418336 CCT4P50991 539 aaKnown RBP26.07■■□□□ 1.76
PKNOX1-202ENST00000418336 APLP1P51693 650 aa26.07■■□□□ 1.76
PKNOX1-202ENST00000418336 PSMD14O00487 310 aa26.06■■□□□ 1.76
PKNOX1-202ENST00000418336 IFIT5Q13325 482 aaKnown RBP26.06■■□□□ 1.76
PKNOX1-202ENST00000418336 TXNRD3Q86VQ6 643 aa26.06■■□□□ 1.76
PKNOX1-202ENST00000418336 DNAJC5GQ8N7S2 189 aa26.06■■□□□ 1.76
PKNOX1-202ENST00000418336 ZC3H12CQ9C0D7 883 aaKnown RBP26.06■■□□□ 1.76
PKNOX1-202ENST00000418336 BICC1Q9H694 974 aaKnown RBP26.06■■□□□ 1.76
PKNOX1-202ENST00000418336 PASKQ96RG2 1323 aa26.06■■□□□ 1.76
PKNOX1-202ENST00000418336 ZNF609O15014 1411 aa26.05■■□□□ 1.76
PKNOX1-202ENST00000418336 SHTN1A0MZ66 631 aa26.05■■□□□ 1.76
PKNOX1-202ENST00000418336 ITGBL1O95965 494 aaPredicted RBP26.05■■□□□ 1.76
PKNOX1-202ENST00000418336 KLRK1P26718 216 aa26.05■■□□□ 1.76
PKNOX1-202ENST00000418336 HTRA3P83110 453 aa26.05■■□□□ 1.76
PKNOX1-202ENST00000418336 CHRNDQ07001 517 aa26.05■■□□□ 1.76
PKNOX1-202ENST00000418336 TNIP1Q15025 636 aa26.05■■□□□ 1.76
PKNOX1-202ENST00000418336 ZNF594Q96JF6 807 aaPredicted RBP26.05■■□□□ 1.76
PKNOX1-202ENST00000418336 BCAR3O75815 825 aa26.04■■□□□ 1.76
PKNOX1-202ENST00000418336 PNMA8AQ86V59 439 aaPredicted RBP26.04■■□□□ 1.76
PKNOX1-202ENST00000418336 ARHGAP45Q92619 1136 aa26.04■■□□□ 1.76
PKNOX1-202ENST00000418336 ZBTB12Q9Y330 459 aaPredicted RBP26.04■■□□□ 1.76
PKNOX1-202ENST00000418336 TNNQ9UQP3 1299 aa26.03■■□□□ 1.76
PKNOX1-202ENST00000418336 LEMD3Q9Y2U8 911 aa26.03■■□□□ 1.76
PKNOX1-202ENST00000418336 SNAP23O00161 211 aa26.02■■□□□ 1.76
PKNOX1-202ENST00000418336 VIL1P09327 827 aaKnown RBP26.02■■□□□ 1.76
PKNOX1-202ENST00000418336 HIRAP54198 1017 aaPredicted RBP26.02■■□□□ 1.76
PKNOX1-202ENST00000418336 EAPPQ56P03 285 aaPredicted RBP26.02■■□□□ 1.76
PKNOX1-202ENST00000418336 MPHOSPH8Q99549 860 aa26.02■■□□□ 1.76
PKNOX1-202ENST00000418336 API5Q9BZZ5 524 aaKnown RBP26.02■■□□□ 1.76
PKNOX1-202ENST00000418336 ZNF804BA4D1E1 1349 aa26.01■■□□□ 1.75
PKNOX1-202ENST00000418336 USP50Q70EL3 339 aaPredicted RBP26.01■■□□□ 1.75
PKNOX1-202ENST00000418336 DPF2Q92785 391 aa26.01■■□□□ 1.75
PKNOX1-202ENST00000418336 KIF16BQ96L93 1317 aa26.01■■□□□ 1.75
PKNOX1-202ENST00000418336 ANKRD2Q9GZV1 360 aa26.01■■□□□ 1.75
PKNOX1-202ENST00000418336 CHMP3Q9Y3E7 222 aa26.01■■□□□ 1.75
PKNOX1-202ENST00000418336 LMOD1P29536 600 aaPredicted RBP26■■□□□ 1.75
PKNOX1-202ENST00000418336 CCDC57Q2TAC2 916 aa26■■□□□ 1.75
PKNOX1-202ENST00000418336 PUS3Q9BZE2 481 aaKnown RBP26■■□□□ 1.75
PKNOX1-202ENST00000418336 ADARB2Q9NS39 739 aaKnown RBP26■■□□□ 1.75
PKNOX1-202ENST00000418336 C15orf52Q6ZUT6 534 aaKnown RBP25.99■■□□□ 1.75
PKNOX1-202ENST00000418336 TRPM4Q8TD43 1214 aa25.99■■□□□ 1.75
PKNOX1-202ENST00000418336 GMLQ99445 158 aa25.99■■□□□ 1.75
PKNOX1-202ENST00000418336 TAF5LO75529 589 aa25.98■■□□□ 1.75
PKNOX1-202ENST00000418336 TRIM27P14373 513 aa25.98■■□□□ 1.75
PKNOX1-202ENST00000418336 RFX5P48382 616 aaPredicted RBP25.98■■□□□ 1.75
PKNOX1-202ENST00000418336 MAP1SQ66K74 1059 aaPredicted RBP25.98■■□□□ 1.75
PKNOX1-202ENST00000418336 INTS3Q68E01 1043 aaKnown RBP25.98■■□□□ 1.75
PKNOX1-202ENST00000418336 PODNQ7Z5L7 613 aa25.98■■□□□ 1.75
PKNOX1-202ENST00000418336 HELBQ8NG08 1087 aaPredicted RBP25.98■■□□□ 1.75
PKNOX1-202ENST00000418336 PGAP2Q9UHJ9 254 aa25.98■■□□□ 1.75
PKNOX1-202ENST00000418336 CNOT7Q9UIV1 285 aaKnown RBP25.98■■□□□ 1.75
PKNOX1-202ENST00000418336 RIPOR2Q9Y4F9 1068 aa25.98■■□□□ 1.75
PKNOX1-202ENST00000418336 EGFRP00533 1210 aa25.97■■□□□ 1.75
PKNOX1-202ENST00000418336 LDHAL6AQ6ZMR3 332 aa25.97■■□□□ 1.75
PKNOX1-202ENST00000418336 MICALL2Q8IY33 904 aa25.97■■□□□ 1.75
PKNOX1-202ENST00000418336 RPS12P25398 132 aaKnown RBP25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms